FC931260

Overview
NameFC931260
Unique NameFC931260
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9476 contig Ccv1_Contig9476:14..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NB5R2_XENTR (NADH-cytochrome b5 reductase 2 OS=Xenopus tropicalis GN=cyb5r2 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.086e-16
Identity = 64/169 (37.87%), Postives = 84/169 (49.70%), Query Frame = 3
Query:  243 PKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK--LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY--------PE-GKMSQHFASLKPGDVVEVKGPIEKLRY--------------SPNMK--KHIGMIAGWHRYTPMLQVIEAI 668
            P   L+P+      L +   +SH++  FRF   PS +  LGL V   +   A +      N   VVR YTP+S  E KGH DL++KVY        PE GKMSQH  SLK G+ ++ +GP   L Y               P +K  KH+GM+AG    TPMLQ+I  I
Sbjct:   36 PLTLLDPNAKYPLPLIEKQEISHDTKKFRFGL-PSQEHVLGLPVGQHVYLSAKI------NGSLVVRAYTPVSSDEVKGHVDLIVKVYYKNVHPKFPEGGKMSQHLDSLKIGETIDFRGPNGLLVYKEKGKFAIRPDKKSEPKLKVAKHVGMLAGGTGITPMLQLIRQI 197          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NIA_VOLCA (Nitrate reductase [NADH] OS=Volvox carteri GN=NITA PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.388e-16
Identity = 60/165 (36.36%), Postives = 83/165 (50.30%), Query Frame = 3
Query:  243 PKIALNPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY--------PEG-KMSQHFASLKPGDVVEVKGPIEKL------RYSPNMK-----KHIGMIAGWHRYTPMLQVIEAILK 674
            P + LNP + +   L +   ++ N+ +FRF    P  ++GL V   + T A +      N + V+R YTPIS  E  G  D+LIKVY        P+G KMSQHF SL+ GD VE KGP+          Y+ N K      H+  +AG    TP   VI+A L+
Sbjct:  599 PLVVLNPRQKVKLPLIERIELNRNTRIFRFGLPSPQHRIGLPVGKHVFTYATI------NGENVMRAYTPISGDEELGRLDMLIKVYFANEHPAFPDGGKMSQHFESLRIGDTVEFKGPLGHFVYDGRGSYTLNGKLHKHATHMSFVAGGTGITPCYAVIKAALR 757          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NIA2_PHAVU (Nitrate reductase [NADH] 2 OS=Phaseolus vulgaris GN=NIA2 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.388e-16
Identity = 69/194 (35.57%), Postives = 90/194 (46.39%), Query Frame = 3
Query:  195 SSPN--------LVHLDQINEETG------PKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAKL-GLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRYS----------PNMKKHIGMIAGWHRYTPMLQVIEAILK 674
            SSPN         +HL  INE T         +ALNP + I  KL     +SH+  LFRF      +L GL V   I   A +      + K  +R YTP S  E  G FDLLIKVY +         G MSQ+  SL  G +++VKGP+  + Y+              K + M+AG    TP+ QV +AILK
Sbjct:  597 SSPNNSVHGNSEFIHLAPINEITTIPPLPPRSVALNPRQKIPCKLVSKTSISHDVRLFRFEMPSKNQLLGLPVGKHIFLCATI------DGKLCMRAYTPTSSVEEVGFFDLLIKVYFKDVHPKFPNGGLMSQYLESLSIGSMLDVKGPLGHIEYTGRGNFTVNGKSRFAKRLAMLAGGTGITPIYQVAQAILK 784          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NB5R3_MOUSE (NADH-cytochrome b5 reductase 3 OS=Mus musculus GN=Cyb5r3 PE=1 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 7.037e-16
Identity = 65/181 (35.91%), Postives = 87/181 (48.07%), Query Frame = 3
Query:  231 EETGPKIAL-NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY---------PEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMK----------------KHIGMIAGWHRYTPMLQVIEAILKIQMTHS 692
            + + P I L NPD     +L D   +S ++  FRF+   P   LGL +   I     L    +GN   V+RPYTP+S  + KG  DL++KVY           GKMSQ+  ++K GD +E +GP   L Y    K                K +GMIAG    TPMLQVI A+LK    H+
Sbjct:   28 QRSTPAITLENPDIKYPLRLIDKEVISPDTRRFRFALPSPQHILGLPIGQHIY----LSTRIDGNL--VIRPYTPVSSDDDKGFVDLVVKVYFKDTHPKFPAGGKMSQYLENMKIGDTIEFRGPNGLLVYQGKGKFAIRADKKSNPVVRTVKSVGMIAGGTGITPMLQVIRAVLKDPNDHT 202          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: MCR1_KLULA (NADH-cytochrome b5 reductase 2 OS=Kluyveromyces lactis GN=MCR1 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.037e-16
Identity = 48/144 (33.33%), Postives = 72/144 (50.00%), Query Frame = 3
Query:  246 KIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAKL-GLDVASCILTR--APLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAI 668
            K  L  ++WI   +    ++SH++  F F+     ++ GL  ASCIL +   P G +       V+RPYTP+SD   KG  +L++K Y  GK + H   LK  D V  KGPI K  + PN    I ++       P+ Q++  I
Sbjct:   41 KAFLGDNEWIDLPIIKIEKLSHDTKRFTFALPKKDQVSGLITASCILAKFVTPKGSN-------VIRPYTPVSDNGTKGKMELVVKHYENGKFTSHLFGLKENDTVSFKGPITKWEWKPNSYDSITLLGAGTGINPLYQLVHHI 177          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: YMI7_YEAST (Uncharacterized oxidoreductase YML087C OS=Saccharomyces cerevisiae GN=YML087C PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.568e-15
Identity = 46/145 (31.72%), Postives = 77/145 (53.10%), Query Frame = 3
Query:  240 GPKIALNPDKWIGFKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAIL 671
            G   +L  +KW+   L    R+S N+ L+ F    P  +L + +   +  R  +      N + +VR YTP++    +GH +L++K Y  G +S++F  LK    VE KGP+ +L Y  +    +G+IAG    TP+LQV++ I+
Sbjct:   62 GTDKSLYRNKWVALPLSKKTRISRNTSLYCFKLKYPFERLHIPMGYHLAVRVTI------NGERLVRYYTPVNVPNTEGHLELVVKTYKHGVVSKYFDKLKIRQYVEFKGPLGELEYDQDTATELGIIAGGSGITPVLQVLQEII 200          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NIA2_SOYBN (Inducible nitrate reductase [NADH] 2 OS=Glycine max GN=INR2 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.047e-15
Identity = 65/182 (35.71%), Postives = 88/182 (48.35%), Query Frame = 3
Query:  198 SPNLVHLDQINEETGP--KIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAKL--GLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGK---------MSQHFASLKPGDVVEVKGPIEKLRYS----------PNMKKHIGMIAGWHRYTPMLQVIEAILK 674
            S + + L  I E   P   +ALNP + I  KL     +SH+  LFRF+  PS  L  GL V   I   A + +      K  +R YTP S     G+FDL++KVY +G          MSQH  SL  G V++VKGP+  + Y+          P     + M+AG    TP+ QV+ AILK
Sbjct:  610 SSDTIPLTPIKEVITPMRSVALNPREKIPCKLISKTSISHDVRLFRFAL-PSDDLLMGLPVGKHIFLCATVDE------KLCMRAYTPTSSVHEVGYFDLVVKVYFKGVHPKFPTGGIMSQHLDSLPIGSVLDVKGPLGHIVYTGRGNFLVHGKPRFATRLAMLAGGTGITPIYQVVRAILK 784          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NIA1_ARATH (Nitrate reductase [NADH] 1 OS=Arabidopsis thaliana GN=NIA1 PE=1 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 2.674e-15
Identity = 67/192 (34.90%), Postives = 94/192 (48.96%), Query Frame = 3
Query:  189 YFSSPNL-VH--------LDQINEETGPK-IAL-NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRY----------SPNMKKHIGMIAGWHRYTPMLQVIEAIL 671
            Y SSPN+ VH        L  I E T  K IAL NP + I  +L +   +SH+   FRF+      +LGL V   +   A +      N K  +R YTP S  +A GH DL++KVY +         G MSQH  SL  G ++++KGP+  + Y           P   K + M+AG    TP+ Q+I++IL
Sbjct:  624 YDSSPNVSVHGASNFGPLLAPIKELTPQKNIALVNPREKIPVRLIEKTSISHDVRKFRFALPSEDQQLGLPVGKHVFVCANI------NDKLCLRAYTPTSAIDAVGHIDLVVKVYFKDVHPRFPNGGLMSQHLDSLPIGSMIDIKGPLGHIEYKGKGNFLVSGKPKFAKKLAMLAGGTGITPIYQIIQSIL 809          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NCB5R_YARLI (NADH-cytochrome b5 reductase 1 OS=Yarrowia lipolytica GN=CBR1 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.674e-15
Identity = 51/146 (34.93%), Postives = 77/146 (52.74%), Query Frame = 3
Query:  279 FKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPIS-DTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILKIQMTHSGVTAVW 710
            F L     +SHNS ++RF    PS  LGL +   +   A +G       K V+R YTP S D   KG+FD+LIK YP+G +S++ + L  GD ++V+GP     Y+  + +  GM+ G    TPM Q++  I      ++ V  V+
Sbjct:   52 FPLIQKTVLSHNSAIYRFGLPRPSHVLGLPIGQHVSLSANIGG------KEVLRSYTPTSSDLYDKGYFDILIKTYPQGNISKYVSELAIGDTMKVRGPKGNFVYNHGLVESFGMVCGGTGITPMYQILRHIAADPADNTKVNLVY 191          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NB5R2_CHICK (NADH-cytochrome b5 reductase 2 OS=Gallus gallus GN=CYB5R2 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.957e-15
Identity = 75/219 (34.25%), Postives = 97/219 (44.29%), Query Frame = 3
Query:   93 EAFGGQPKSDFNKFRFPFGAIAAVAGGVSYYCYFSSPNLVHLDQINEETGPKIAL-NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY--------PE-GKMSQHFASLKPGDVVEVKGPIEKLRY--------SPNMK--------KHIGMIAGWHRYTPMLQVIEAI 668
            EAF G P            A+AAVA  V          L+ L       G  + L +P       L     +SH++  FRF    P   LGL V   +   A +      N   V+R YTP+S  E KG+ DL+IKVY        PE GKMSQ+  S+K GDV++ +GP   L Y         P+ K        KH+G+IAG    TPMLQ+I  I
Sbjct:    2 EAFSGTPV---------VVAVAAVAATVLL--------LLLLRGAGRRPGRPVTLRDPQAKYPLPLVGKEEISHDTKKFRFGLPSPDHVLGLPVGQHVYLSAKI------NGNLVIRAYTPVSSDETKGYVDLIIKVYYKNVNPKFPEGGKMSQYLDSMKIGDVIDFRGPNGLLVYKGSGTFMIKPDKKSEAQRKFAKHLGVIAGGTGITPMLQLIRHI 197          
The following BLAST results are available for this feature:
BLAST of FC931260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
NB5R2_XENTR1.086e-1637.87NADH-cytochrome b5 reductase 2 OS=Xenopus tropical... [more]
NIA_VOLCA5.388e-1636.36Nitrate reductase [NADH] OS=Volvox carteri GN=NITA... [more]
NIA2_PHAVU5.388e-1635.57Nitrate reductase [NADH] 2 OS=Phaseolus vulgaris G... [more]
NB5R3_MOUSE7.037e-1635.91NADH-cytochrome b5 reductase 3 OS=Mus musculus GN=... [more]
MCR1_KLULA7.037e-1633.33NADH-cytochrome b5 reductase 2 OS=Kluyveromyces la... [more]
YMI7_YEAST1.568e-1531.72Uncharacterized oxidoreductase YML087C OS=Saccharo... [more]
NIA2_SOYBN2.047e-1535.71Inducible nitrate reductase [NADH] 2 OS=Glycine ma... [more]
NIA1_ARATH2.674e-1534.90Nitrate reductase [NADH] 1 OS=Arabidopsis thaliana... [more]
NCB5R_YARLI2.674e-1534.93NADH-cytochrome b5 reductase 1 OS=Yarrowia lipolyt... [more]
NB5R2_CHICK5.957e-1534.25NADH-cytochrome b5 reductase 2 OS=Gallus gallus GN... [more]

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Properties
Property NameValue
Genbank descriptionC34103C03EF PostHarvP1 Citrus clementina cDNA clone C34103C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931260 ID=FC931260; Name=FC931260; organism=Citrus clementina; type=EST; length=727bp
GACTTTTCTTTGCTTTGCTTCTTCTCCAACATTAGAAAATGGCTACGACC
TTCTTCAGAAGACTGGCTAAAGCTACTCCAATTGCATTCAACGAGGCATT
TGGAGGGCAACCCAAGTCCGATTTCAACAAATTTCGATTTCCCTTTGGAG
CAATCGCTGCTGTTGCTGGTGGAGTCTCCTATTACTGTTACTTTTCATCC
CCAAATTTGGTTCATCTAGATCAAATCAATGAAGAGACGGGTCCAAAAAT
TGCTCTCAATCCGGACAAGTGGATTGGATTTAAGTTGCAAGACACTGCAA
GGGTAAGCCACAATAGTCATTTGTTCAGGTTTTCATTTGATCCATCTGCC
AAGTTGGGTTTGGATGTTGCTTCATGCATCCTTACAAGGGCTCCATTAGG
ACAAGATGCTGAAGGAAATACAAAATATGTTGTACGGCCGTATACTCCTA
TATCAGATACAGAAGCTAAGGGACACTTTGACTTGTTAATTAAGGTTTAT
CCTGAGGGTAAAATGAGTCAGCATTTTGCTAGCTTAAAACCAGGGGATGT
AGTTGAAGTGAAAGGACCCATTGAAAAGCTCCGATACTCTCCCAATATGA
AGAAACACATCGGCATGATAGCTGGGTGGCACAGGTATACTCCTATGCTT
CAGGTAATTGAGGCTATACTGAAGATCCAGATGACACACTCAGGTGTCAC
TGCTGTATGGCATATATCCCAGATGAT
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