FC931261
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931261 vs. ExPASy Swiss-Prot
Match: LOX22_HORVU (Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.870e-20 Identity = 48/112 (42.86%), Postives = 70/112 (62.50%), Query Frame = 1 Query: 19 EQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGV 354 E+ F PE L+T PSQ+Q VMA LD+LS+H+ DEEY+G EPAW+ D ++ AF+ F+ K+ ++ ++ N D RNR+GAG+VPY LL+P + + K V Sbjct: 810 EEMLAFKAAPEKVWLDTLPSQLQTVMVMATLDLLSSHASDEEYMGTHQEPAWQRDGEVDKAFQVFQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPYVLLRPLNGNPMDAKTV 921
BLAST of FC931261 vs. ExPASy Swiss-Prot
Match: LOX1_ARATH (Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 6.017e-19 Identity = 49/108 (45.37%), Postives = 66/108 (61.11%), Query Frame = 1 Query: 37 LEK-PENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 357 LEK P+ L T +Q+Q ++++++LSTHS DE YLG+ W + AFEKF K+ E+E ID RN D L+NR G +PY LL P SE GVTG+G+P Sbjct: 747 LEKNPDKVFLKTITAQLQTLLGISLIEILSTHSSDEVYLGQRDSKEWAAEKEALEAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPSSEGGVTGRGIP 854
BLAST of FC931261 vs. ExPASy Swiss-Prot
Match: LOX1_HORVU (Lipoxygenase 1 OS=Hordeum vulgare GN=LOX1.1 PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 7.858e-19 Identity = 48/123 (39.02%), Postives = 69/123 (56.10%), Query Frame = 1 Query: 7 DPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSE------PGVTGKGVP 357 +P E++ PE A ++T SQIQ +++L+VLS HS DE YLG+ P W DP F++F +L+E+E + N DP+L+NRNG PY LL P + G+T KG+P Sbjct: 735 EPGTEEYAELERDPERAFIHTITSQIQTIIGVSLLEVLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIP 857
BLAST of FC931261 vs. ExPASy Swiss-Prot
Match: LOXA_SOLLC (Lipoxygenase A OS=Solanum lycopersicum GN=LOX1.1 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.751e-18 Identity = 46/117 (39.32%), Postives = 69/117 (58.97%), Query Frame = 1 Query: 7 DPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 357 +P +++ + P+ A L T +Q+Q ++++++LS H+ DE YLG+ P W +D AAFE+F KL ++E I RN + L NR G PY LL P SE G+TGKG+P Sbjct: 739 EPGTPEYEELKKNPDKAFLKTITAQLQTLLGVSLIEILSRHTTDEIYLGQRESPEWTKDKEPLAAFERFGNKLTDIEKQIMQRNGNNILTNRTGPVNAPYTLLFPTSEGGLTGKGIP 855
BLAST of FC931261 vs. ExPASy Swiss-Prot
Match: LOX1_SOLTU (Lipoxygenase 1 OS=Solanum tuberosum GN=LOX1.1 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.286e-18 Identity = 46/117 (39.32%), Postives = 69/117 (58.97%), Query Frame = 1 Query: 7 DPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 357 +P +++ P+ A L T +Q+Q ++++++LS H+ DE YLG+ P W +D AAF++F KL ++E I RN D L NR+G PY LL P SE G+TGKG+P Sbjct: 740 EPGTPEYEELKRNPDKAFLKTITAQLQTLLGVSLVEILSRHTTDEIYLGQRESPEWTKDKEPLAAFDRFGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLLFPTSEGGLTGKGIP 856
BLAST of FC931261 vs. ExPASy Swiss-Prot
Match: LOXX_SOYBN (Seed lipoxygenase OS=Glycine max GN=LOX1.4 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 3.900e-18 Identity = 44/107 (41.12%), Postives = 65/107 (60.75%), Query Frame = 1 Query: 37 LEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 357 ++ P+ A L T + + ++++++LS H+ DE YLG+ P W D AF++F KL +EG I+ARN+DP LRNR G +PY LL SE G+T KG+P Sbjct: 753 VKNPQKAYLRTITPKFETLIDLSVIEILSRHASDEIYLGERETPNWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRSSEEGLTFKGIP 859
BLAST of FC931261 vs. ExPASy Swiss-Prot
Match: LOX3_ORYSJ (Putative lipoxygenase 3 OS=Oryza sativa subsp. japonica GN=Os03g0700400 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.936e-17 Identity = 47/123 (38.21%), Postives = 66/123 (53.66%), Query Frame = 1 Query: 7 DPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSE------PGVTGKGVP 357 +P E + PE A + T SQ+Q +++++VLS HS DE YLG+ PAW D AF +F +L+E+EG + N D L+NRNG PY LL P + G+T KG+P Sbjct: 739 EPGTEAYGELGRDPERAFIRTITSQLQTIIGISLIEVLSKHSSDEVYLGQRDTPAWTSDARALEAFRRFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYMLLYPNTSDVTGAAAGITAKGIP 861
BLAST of FC931261 vs. ExPASy Swiss-Prot
Match: LOX3_PEA (Seed lipoxygenase-3 OS=Pisum sativum GN=LOX1.3 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 3.302e-17 Identity = 43/112 (38.39%), Postives = 67/112 (59.82%), Query Frame = 1 Query: 22 QWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 357 +++ ++ P+ A L T + Q ++++++LS H+ DE YLG+ P W D AF+KF KL E+E + RN D KLRNR+G +PY LL P S+ G+T +G+P Sbjct: 745 EFEELVKSPQKAYLKTITPKFQTLIDLSVIEILSRHASDELYLGERDNPNWTSDKRALEAFKKFGNKLAEIEKKLTQRNNDEKLRNRHGPVEMPYTLLYPSSKEGLTFRGIP 856
BLAST of FC931261 vs. ExPASy Swiss-Prot
Match: LOX3_SOYBN (Seed lipoxygenase-3 OS=Glycine max GN=LOX1.3 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.639e-16 Identity = 41/106 (38.68%), Postives = 62/106 (58.49%), Query Frame = 1 Query: 40 EKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 357 + P+ A L T + Q ++++++LS H+ DE YLG+ P W D AF++F KL ++E + RN D KLRNR G +PY LL P S+ G+T +G+P Sbjct: 747 KNPQKAYLKTITPKFQTLIDLSVIEILSRHASDEVYLGERDNPNWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPSSKEGLTFRGIP 852
BLAST of FC931261 vs. ExPASy Swiss-Prot
Match: LOX1_SOYBN (Seed lipoxygenase-1 OS=Glycine max GN=LOX1.1 PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 2.140e-16 Identity = 44/113 (38.94%), Postives = 66/113 (58.41%), Query Frame = 1 Query: 22 QWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLR-NRNGAGMVPYELLKPFSEPGVTGKGVP 357 +++ + E A L T S++ ++++++LSTH+ DE YLG+ P W D AF+KF KL E+E + RN DP L+ NR G +PY LL P SE G+T +G+P Sbjct: 722 EYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIP 834 The following BLAST results are available for this feature:
BLAST of FC931261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931261 ID=FC931261; Name=FC931261; organism=Citrus clementina; type=EST; length=468bpback to top |