FC931261

Overview
NameFC931261
Unique NameFC931261
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length468
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC931261 vs. ExPASy Swiss-Prot
Match: LOXB_PHAVU (Lipoxygenase (Fragment) OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 9.304e-12
Identity = 38/106 (35.85%), Postives = 58/106 (54.72%), Query Frame = 1 
Query:   40 EKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLG-KEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGV 354
            + PE   L T   + +    + ++++LS H+ DE YLG ++    W  D     AF++F  KL E+E  +  +N D  LRNR G   +PY LL P SE G+T +G+
Sbjct:  636 KNPEKEFLKTITGKKETLIDLTVIEILSRHASDEIYLGERDGGDHWTSDAGPLEAFKRFGKKLAEIEKKLVQKNNDETLRNRTGPAKMPYTLLYPSSEEGLTFRGI 741
The following BLAST results are available for this feature:
BLAST of FC931261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
LOXB_PHAVU9.304e-1235.85Lipoxygenase (Fragment) OS=Phaseolus vulgaris PE=2... [more]

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Properties
Property NameValue
Genbank descriptionC34103C04EF PostHarvP1 Citrus clementina cDNA clone C34103C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931261 ID=FC931261; Name=FC931261; organism=Citrus clementina; type=EST; length=468bp
ACTGAAGATCCATCTGATGAACAATGGAAATTCTTCCTTGAAAAACCTGA
AAATGCACTTTTGAATACCTTCCCTTCCCAGATTCAAGCTACTAAAGTTA
TGGCTATTCTTGATGTTTTATCGACTCATTCTCCTGATGAGGAGTATTTA
GGAAAAGAAATAGAGCCAGCATGGCGTGAGGATCCGGTTATAAATGCAGC
ATTTGAAAAGTTTAGAGGCAAGTTAATGGAGCTTGAAGGGATTATTGATG
CAAGGAATGCAGATCCCAAGTTGAGGAATAGAAATGGAGCTGGGATGGTG
CCATATGAGCTCTTGAAGCCATTTTCGGAACCTGGTGTTACAGGAAAAGG
AGTTCCGTACAGCATCTCTATCTAGAGTTGAAAATGTTGTTGCAATCGCT
CGAATGTTGTATCAATAAAAACTTTTGAGAATGAGTTCAAGAATGAATCA
AATAAATTGCAGTTAATG
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