FC931264

Overview
NameFC931264
Unique NameFC931264
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_VIBC3 (Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=pckA PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.707e-60
Identity = 119/226 (52.65%), Postives = 149/226 (65.93%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +F++M+Y +P + I S+H   NMGK GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS+E EPDI+NAI+   +LEN+        +D+ D S TENTR +YPI +I N   P   G H   +I L+ DAFGVLPPVSKL+ EQT YHF+SG+TA +AGTE G  EP  TFSACFGAAF+ LHPT+YA +L ++M+  GA  +LV
Sbjct:  216 MFAMMNYFLPLQGIASMHCSANMGKAGDVAIFFGLSGTGKTTLSTDPKRALIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPDIYNAIRRDALLENVTV-RSDGSIDFDDGSKTENTRVSYPIYHIDNIVKPVSKGGHATKVIFLSADAFGVLPPVSKLTPEQTKYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLTLHPTQYAEVLVKRMEAAGAEAYLV 440          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_NITWN (Phosphoenolpyruvate carboxykinase [ATP] OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=pckA PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.707e-60
Identity = 116/227 (51.10%), Postives = 147/227 (64.76%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIK-FGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEG-AKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +F+ ++Y +P + +L +H   N+G  GD A               D  R LIGDDEH WS +G+ N EGGCYAKCI LSRE EP+I+ A K FG VLEN+V DE TR  D+ D S TENTR+AYP+E+IPNA +      PKN+++LA DAFGVLPP+++L+  Q MYHF+SGYTA VAGTE     EP+  FSACFG+ F+  HP  Y  ML   + KH    WLV
Sbjct:  203 IFTTLNYYLPDQDVLPMHCSANVGPGGDSAIFFGLSGTGKTTLSADPGRTLIGDDEHGWSKDGIFNFEGGCYAKCIRLSREAEPEIYAASKRFGAVLENVVHDEVTRVPDFNDGSKTENTRSAYPLEFIPNASLTGCAGQPKNLVMLAADAFGVLPPIARLTPAQAMYHFLSGYTAKVAGTERDLGNEPQPEFSACFGSPFLPRHPGVYGNMLRALIAKHNVDCWLV 429          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_AGRVS (Phosphoenolpyruvate carboxykinase [ATP] OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=pckA PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.707e-60
Identity = 115/226 (50.88%), Postives = 147/226 (65.04%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIK-FGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +F+ ++Y++P +Q++ +H   N+G  GD A               D  R LIGDDEH W ++G+ N EGGCYAK I LS E EP+I+   K FGTVLEN+V DE+ R  D+ D S TENTR AYP+ +IPNA       HPK II+L  DAFGV+PP++KL+ EQ MYHF+SGYTA VAGTE G  EP ATFS CFGA F+  HP +Y  +L E + +H    WLV
Sbjct:  203 VFTALNYMLPAKQVMPMHCSANVGPAGDSAVFFGLSGTGKTTLSADPARTLIGDDEHGWGEDGIFNFEGGCYAKTIRLSAEAEPEIYATTKRFGTVLENVVLDEN-RVPDFNDGSKTENTRCAYPLNFIPNASPTGRAGHPKTIIMLTADAFGVMPPIAKLTPEQAMYHFLSGYTAKVAGTERGVTEPEATFSTCFGAPFMPRHPAEYGNLLKELIARHEVDCWLV 427          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_BRUSU (Phosphoenolpyruvate carboxykinase [ATP] OS=Brucella suis GN=pckA PE=3 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 3.536e-60
Identity = 113/226 (50.00%), Postives = 151/226 (66.81%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +F+ ++Y++P + ++ +H   N G +GD A               D  R LIGDDEH W ++GV N EGGCYAK I LS E EP+I+    +FGTVLEN+V DE+ R+ D+ D S+TENTR AYP+++IPNA     G  PKNII+L  DAFGV+PP++KL+  Q MYHF+SGYTA VAGTE+G  EP ATFS CFGA F+  HP++Y  +L + + +H    WLV
Sbjct:  203 VFTALNYILPAKGVMPMHCSANEGPNGDTAVFFGLSGTGKTTLSADPTRTLIGDDEHGWGEHGVFNFEGGCYAKTIRLSAEAEPEIYATTQRFGTVLENVVLDEN-RQPDFDDGSLTENTRCAYPLDFIPNASKSGKGGQPKNIIMLTADAFGVMPPIAKLTPAQAMYHFLSGYTAKVAGTEKGVTEPEATFSTCFGAPFMPRHPSEYGNLLRKLIAEHKVDCWLV 427          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_BRUC2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=pckA PE=3 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 3.536e-60
Identity = 113/226 (50.00%), Postives = 151/226 (66.81%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +F+ ++Y++P + ++ +H   N G +GD A               D  R LIGDDEH W ++GV N EGGCYAK I LS E EP+I+    +FGTVLEN+V DE+ R+ D+ D S+TENTR AYP+++IPNA     G  PKNII+L  DAFGV+PP++KL+  Q MYHF+SGYTA VAGTE+G  EP ATFS CFGA F+  HP++Y  +L + + +H    WLV
Sbjct:  203 VFTALNYILPAKGVMPMHCSANEGPNGDTAVFFGLSGTGKTTLSADPTRTLIGDDEHGWGEHGVFNFEGGCYAKTIRLSAEAEPEIYATTQRFGTVLENVVLDEN-RQPDFDDGSLTENTRCAYPLDFIPNASKSGKGGQPKNIIMLTADAFGVMPPIAKLTPAQAMYHFLSGYTAKVAGTEKGVTEPEATFSTCFGAPFMPRHPSEYGNLLRKLIAEHKVDCWLV 427          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_RHOPT (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodopseudomonas palustris (strain TIE-1) GN=pckA PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.618e-60
Identity = 113/226 (50.00%), Postives = 146/226 (64.60%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNA-IKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +F+ ++Y +P++ +L +H   N+G +GD A               D NR LIGDDEH W  +GV N EGGCYAKCI LS E EP+I+ A  +FG VLEN+V  E  R+ D+ D S TENTR+AYP+E IPNA +      PKN+++LA DAFGV+PP++KL+  Q MYHF+SGYTA VAGTE G  EP   FS CFG+ F+   P+ Y  ML E + KH    WLV
Sbjct:  203 VFTTLNYYLPEKGVLPMHCSANVGPNGDTAIFFGLSGTGKTTLSADPNRTLIGDDEHGWGKDGVFNFEGGCYAKCIKLSAENEPEIYAASTRFGAVLENVVLGEIDRKPDFDDGSKTENTRSAYPLESIPNASLTGRAGQPKNVVMLAADAFGVMPPIAKLTPAQAMYHFLSGYTAKVAGTERGVTEPTPEFSTCFGSPFLPRDPSVYGNMLRELIAKHNVDCWLV 428          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_RHOPA (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodopseudomonas palustris GN=pckA PE=1 SV=2)

HSP 1 Score: 231.106 bits (588), Expect = 4.618e-60
Identity = 113/226 (50.00%), Postives = 146/226 (64.60%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNA-IKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +F+ ++Y +P++ +L +H   N+G +GD A               D NR LIGDDEH W  +GV N EGGCYAKCI LS E EP+I+ A  +FG VLEN+V  E  R+ D+ D S TENTR+AYP+E IPNA +      PKN+++LA DAFGV+PP++KL+  Q MYHF+SGYTA VAGTE G  EP   FS CFG+ F+   P+ Y  ML E + KH    WLV
Sbjct:  203 VFTTLNYYLPEKGVLPMHCSANVGPNGDTAIFFGLSGTGKTTLSADPNRTLIGDDEHGWGKDGVFNFEGGCYAKCIKLSSENEPEIYAASTRFGAVLENVVLGELDRKPDFDDGSKTENTRSAYPLESIPNASLTGRAGQPKNVVMLAADAFGVMPPIAKLTPAQAMYHFLSGYTAKVAGTERGVTEPTPEFSTCFGSPFLPRDPSVYGNMLRELIAKHNVDCWLV 428          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_OCHA4 (Phosphoenolpyruvate carboxykinase [ATP] OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=pckA PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.618e-60
Identity = 112/226 (49.56%), Postives = 151/226 (66.81%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +F+ ++Y++P + ++ +H   N G +GD A               D  R LIGDDEH W ++G+ N EGGCYAK I LS E EP+I+    +FGTVLEN+V DE+ R+ D+ D S+TENTR AYP+++IPNA     G  PKNII+L  DAFGV+PP++KL+  Q MYHF+SGYTA VAGTE+G  EP ATFS CFGA F+  HP++Y  +L + + +H    WLV
Sbjct:  203 VFTALNYILPAKGVMPMHCSANEGPNGDTAVFFGLSGTGKTTLSADPTRTLIGDDEHGWGEHGIFNFEGGCYAKTIRLSAEAEPEIYATTQRFGTVLENVVLDEN-RQPDFDDGSLTENTRCAYPLDFIPNASKSGKGGQPKNIIMLTADAFGVMPPIAKLTPAQAMYHFLSGYTAKVAGTEKGVTEPEATFSTCFGAPFMPRHPSEYGNLLRKLIAEHKVDCWLV 427          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_HAEPS (Phosphoenolpyruvate carboxykinase [ATP] OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=pckA PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.618e-60
Identity = 120/226 (53.10%), Postives = 148/226 (65.49%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            LFSLM+Y +P + I S+H   N+G+DGDVA               D  R LIGDDEH W D+GV N EGGCYAK I+LS E EPDI+ AIK   +LEN+V  E    +D+ D S TENTR +YPI +I N   P     H   +I L  DAFGVLPPVSKL+ EQT Y+F+SG+TA +AGTE G  EP  TFSACFG AF+ LHPT+YA +L ++M+  GA  +LV
Sbjct:  211 LFSLMNYWLPLKGIASMHCSANVGEDGDVAVFFGLSGTGKTTLSTDPKRKLIGDDEHGWDDDGVFNYEGGCYAKTINLSEENEPDIYRAIKRDALLENVVVREDG-SIDFADGSKTENTRVSYPIYHIDNIVEPVSKAGHATKVIFLTADAFGVLPPVSKLTPEQTKYYFLSGFTAKLAGTERGVTEPTPTFSACFGKAFLSLHPTQYAEVLVKRMEASGAEAYLV 435          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_HAES2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Haemophilus somnus (strain 2336) GN=pckA PE=3 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 7.877e-60
Identity = 120/226 (53.10%), Postives = 148/226 (65.49%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +FS+M+Y +P + I S+H   N+GKDGDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS E EPDI+ AI+   +LEN+V  E    VD+ D S TENTR +YPI +I N   P     H   +I L  DAFGVLPPVSKL+ EQT Y+F+SG+TA +AGTE G  EP  TFSACFGAAF+ LHPT+YA +L ++M+  GA  +LV
Sbjct:  213 MFSMMNYFLPLKGIASMHCSANVGKDGDVAIFFGLSGTGKTTLSTDPKRQLIGDDEHGWDDDGVFNYEGGCYAKTIKLSAESEPDIYRAIRRDALLENVVVREDG-SVDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSKLTPEQTKYYFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMKDSGAEAYLV 437          
The following BLAST results are available for this feature:
BLAST of FC931264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_VIBC32.707e-6052.65Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio ... [more]
PCKA_NITWN2.707e-6051.10Phosphoenolpyruvate carboxykinase [ATP] OS=Nitroba... [more]
PCKA_AGRVS2.707e-6050.88Phosphoenolpyruvate carboxykinase [ATP] OS=Agrobac... [more]
PCKA_BRUSU3.536e-6050.00Phosphoenolpyruvate carboxykinase [ATP] OS=Brucell... [more]
PCKA_BRUC23.536e-6050.00Phosphoenolpyruvate carboxykinase [ATP] OS=Brucell... [more]
PCKA_RHOPT4.618e-6050.00Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodops... [more]
PCKA_RHOPA4.618e-6050.00Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodops... [more]
PCKA_OCHA44.618e-6049.56Phosphoenolpyruvate carboxykinase [ATP] OS=Ochroba... [more]
PCKA_HAEPS4.618e-6053.10Phosphoenolpyruvate carboxykinase [ATP] OS=Haemoph... [more]
PCKA_HAES27.877e-6053.10Phosphoenolpyruvate carboxykinase [ATP] OS=Haemoph... [more]

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Properties
Property NameValue
Genbank descriptionC34103C07EF PostHarvP1 Citrus clementina cDNA clone C34103C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931264 ID=FC931264; Name=FC931264; organism=Citrus clementina; type=EST; length=724bp
GTCTATTCAGCTTAATGCATTACCTAATGCCTAAACGTCAAATCCTCTCC
CTCCACTCTGGCTGCAATATGGGAAAAGATGGGGATGTTGCCCTTTTCTT
CGGACTATCCGGTACTGGGAAGACAACTCTGTCTACTGATCATAACCGGT
ACTTAATTGGAGATGATGAGCACTGCTGGAGTGATAATGGAGTATCAAAC
ATTGAAGGCGGGTGCTATGCCAAATGCATTGATCTTTCAAGGGAGAAGGA
GCCTGATATCTGGAATGCCATCAAATTCGGGACTGTGCTAGAAAACATTG
TGTTTGATGAGCATACACGAGAAGTGGACTACTTGGACAAATCTGTCACG
GAGAACACTCGTGCCGCGTATCCCATAGAGTATATCCCAAATGCAAAGAT
ACCTTGTGTTGGCCCTCATCCAAAGAATATAATCCTTTTGGCTTGTGATG
CATTTGGTGTACTCCCACCTGTGAGCAAGTTGAGCTTGGAACAGACCATG
TACCACTTCATCAGTGGCTACACTGCTCTGGTTGCTGGAACAGAGGAAGG
TGCGAAGGAGCCACGGGCAACATTCTCAGCCTGTTTTGGTGCCGCATTTA
TAATGCTACACCCTACAAAGTATGCTGCCATGCTGGCTGAAAAAATGCAG
AAGCATGGGGCTACTGGATGGTTGGTTACACTGGCTGGTCAGGTGGAAGC
TATGGGTCNAGAATCGTATTAATT
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