FC931264

Overview
NameFC931264
Unique NameFC931264
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15351 contig Ccv1_Contig15351:261..985. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_GEOUR (Phosphoenolpyruvate carboxykinase [ATP] OS=Geobacter uraniireducens (strain Rf4) GN=pckA PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 6.227e-65
Identity = 122/240 (50.83%), Postives = 158/240 (65.83%), Query Frame = 3
Query:    3 LFSLMHYLMPKR-QILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVTLAGQVEAMGXES 716
            +F++++YL+P   +++S+H   N G+ GDVA                 NR LIGDDEH W D+GV N EGGCYAK I+LS+E EP+I+    KFGT+LEN+  D  +R +D  D S TENTRA+YPI +IPN     +G HP N+I+L CDAFGVLPP+++L+ EQ MYHF+SGYTA VAGTE G  EP+ATFS CFGA F+ LHP+ YA +L  K+ +H    WLV       A G  S
Sbjct:  203 IFTVLNYLLPHHSKVMSMHCSANTGEKGDVAVFFGLSGTGKTTLSAAPNRSLIGDDEHGWDDDGVFNFEGGCYAKIINLSKESEPEIYETTRKFGTILENVAIDTISRRIDLNDDSFTENTRASYPITHIPNIVPSGMGGHPTNVIMLTCDAFGVLPPIARLTPEQAMYHFLSGYTAKVAGTEAGITEPQATFSTCFGAPFMALHPSVYAELLKAKIARHKVNCWLVNTGWSGGAYGVGS 442          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_BACSK (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus clausii (strain KSM-K16) GN=pckA PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 4.036e-64
Identity = 118/229 (51.53%), Postives = 150/229 (65.50%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGA------TGW 671
            +FS+M+YL+P+  +L +H   N   +G+ A                 +R LIGDDEH WS+ G+ NIEGGCYAKCI LS+E EP IW+AI FG VLEN+V D +T + D+    +TENTRAAYP+E IPNA +P V   PK II L  DAFGVLPP+SKL+ EQ MYHF+SGYT+ +AGTE G  +P ATFS CFGA F+   P +YA ML +K++          TGW
Sbjct:  199 IFSVMNYLLPEAGVLPMHCSANTTDEGETALFFGLSGTGKTTLSASEHRRLIGDDEHGWSEKGIFNIEGGCYAKCIGLSKESEPQIWDAIAFGAVLENVVVDPNTGKPDFKSGELTENTRAAYPLEAIPNALLPSVAGPPKAIIFLTADAFGVLPPISKLTKEQAMYHFLSGYTSKLAGTERGITQPEATFSTCFGAPFLPRKPEEYATMLGDKLENDDVQVFLVNTGW 427          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_RUBXD (Phosphoenolpyruvate carboxykinase [ATP] OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=pckA PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 6.885e-64
Identity = 124/231 (53.68%), Postives = 155/231 (67.10%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQ-ILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAK-EPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGA------TGW 671
            +FS++++++P    +  +H   N+G  GDVA               D  RYLIGDDEH WSD G+ N EGGCYAKCIDLSREKEP I++AI+FG VLEN+V D  TR VDY D S+TENTRAAYP+EYI  A       HP  ++ L  DAFGVLPP+S LS EQ  Y+F+SGYTA +AGTE   + +  ATFSACFGA F+ L  T YAAML+EK+++HG+      TGW
Sbjct:  202 IFSVLNFVLPTEHGVFPMHCSANVGPGGDVALFFGLSGTGKTTLSSDPERYLIGDDEHGWSDEGIFNFEGGCYAKCIDLSREKEPQIYDAIRFGAVLENVVVDRITRRVDYSDASLTENTRAAYPLEYIEGAVDSGRAGHPAAVLFLTADAFGVLPPISVLSPEQAAYYFLSGYTAKLAGTEADMEADVEATFSACFGAPFLPLPATTYAAMLSEKLREHGSRCYLINTGW 432          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_STAS1 (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=pckA PE=3 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 2.003e-63
Identity = 117/225 (52.00%), Postives = 153/225 (68.00%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +FS+++YL+PK  I+S+H   N+G+ GDVA               D  R LIGDDEH W++NG+ NIEGGCYAK I+LS++KEP I++AIK+GT+LEN+V DE   +VD+ D   TENTRAAYPI +I N   P    HP  II L  DAFGVLPP+SKL+ +Q MYHF+SG+TA +AGTE G  EP  +FS CFG+ F+ L+   YA +L   + KHG   +LV
Sbjct:  203 IFSVINYLLPKDDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPTRKLIGDDEHGWNNNGIFNIEGGCYAKAINLSQKKEPQIYDAIKYGTILENVVVDEEG-DVDFDDNQYTENTRAAYPIHHIDNIVTPSKAAHPNTIIFLTADAFGVLPPISKLTKDQAMYHFLSGFTAKLAGTERGVTEPEPSFSTCFGSPFLPLNAKVYADLLGNLIDKHGVDVYLV 426          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_SULDN (Phosphoenolpyruvate carboxykinase [ATP] OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=pckA PE=3 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.616e-63
Identity = 123/229 (53.71%), Postives = 152/229 (66.38%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGA------TGW 671
            +FS+M+Y +P +  LS+H   N+G+ GD A               D  R LIGDDEH W DNGV N EGGCYAK I+L    EP+I+NAIK G +LEN+V ++   EVDY D S TENTR +YPIE+I N +      HP+NII L+ DAFG+LPPVSKL+ EQ MY+F+SGYTA VAGTE G  +P ATFS+CFG AF+ LHPT YA +L EK+ KH        TGW
Sbjct:  198 IFSMMNYWLPLQNKLSMHCSANVGEKGDTALFFGLSGTGKTTLSTDPYRRLIGDDEHGWDDNGVFNFEGGCYAKVINLDGNNEPEIFNAIKSGALLENVVVNDKG-EVDYNDGSKTENTRVSYPIEHIKNHETSLSAGHPENIIFLSADAFGILPPVSKLTREQAMYYFLSGYTAKVAGTERGITKPVATFSSCFGEAFLPLHPTVYAKLLGEKIDKHDVHVYLVNTGW 425          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_STAHJ (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus haemolyticus (strain JCSC1435) GN=pckA PE=3 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.616e-63
Identity = 118/225 (52.44%), Postives = 152/225 (67.56%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +FS+M+YL+P + I+S+H   N+G  GDVA                 +R LIGDDEH W+ NG+ NIEGGCYAK I+LS+EKEP I+NAI++GT+LEN V +E    VD+ D S TENTRAAYPI +I N  +P    HP  II L  DAFGVLPP++KL+  Q MYHF+SG+T+ +AGTE G  EP  +FS CFGA F+ L+P KYA +L E + KH    +LV
Sbjct:  203 IFSVMNYLLPMQDIMSMHCSANVGDKGDVALFFGLSGTGKTTLSAAPDRKLIGDDEHGWNKNGIFNIEGGCYAKAINLSKEKEPQIYNAIQYGTILENTVVNERG-VVDFDDNSYTENTRAAYPIHHIDNIVLPSKAAHPNTIIFLTADAFGVLPPIAKLTKSQAMYHFLSGFTSKLAGTERGVTEPEPSFSTCFGAPFLPLNPNKYADLLGELIDKHDVDVYLV 426          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_SILPO (Phosphoenolpyruvate carboxykinase [ATP] OS=Silicibacter pomeroyi GN=pckA PE=3 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.616e-63
Identity = 118/241 (48.96%), Postives = 157/241 (65.15%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCN--MGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIW-NAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVTLAGQVEAMGXES 716
            +F+L++Y++P++ ++ +H   N  +G   D A               D  R LIGDDEH WSD G  N EGGCYAK I+L+ E EP+I+    KF TV+EN+VFDE T+E+D+ D S+T N R AYP+EYI NA +  +G HPKNII+L CDAFGVLPP+++L+  Q MYHF+SG+T+ VAGTE G  EP+ TFS CFGA F+   P  Y  +L +K+ +HGAT WLV       A G  S
Sbjct:  202 VFTLLNYMLPEKGVMPMHCSANHAVGNPVDTAVFFGLSGTGKTTLSADPARVLIGDDEHGWSDRGTFNFEGGCYAKTINLNPEAEPEIYATTTKFATVIENMVFDEETKELDFDDDSLTANMRCAYPLEYISNASVSALGGHPKNIIMLTCDAFGVLPPIARLTPAQAMYHFLSGFTSKVAGTERGVTEPQPTFSTCFGAPFMPRRPEVYGNLLRDKIARHGATCWLVNTGWTGGAYGVGS 442          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_AGRT5 (Phosphoenolpyruvate carboxykinase [ATP] OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=pckA PE=3 SV=2)

HSP 1 Score: 241.891 bits (616), Expect = 2.616e-63
Identity = 117/226 (51.77%), Postives = 154/226 (68.14%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +F++++YL+P + ++ +H   N+G +GD A               D  R LIGDDEH W ++G+ N EGGCYAK I LS E EP+I+ A  +FGTVLEN+V DE +R  D+ D S+TENTR+AYP+ +IPNA    +  HPK II+L  DAFGVLPP+++L+ EQ MYHF+SGYTA VAGTE+G  EP ATFS CFGA F+  HP +Y  +L E + KHG   WLV
Sbjct:  203 VFTVLNYLLPAKGVMPMHCSANVGPEGDSAVFFGLSGTGKTTLSADPARTLIGDDEHGWGEHGIFNFEGGCYAKAIKLSSEAEPEIYAATNRFGTVLENVVLDE-SRVPDFNDNSLTENTRSAYPLHFIPNASETGIAGHPKTIIMLTADAFGVLPPIARLTPEQAMYHFLSGYTAKVAGTEKGVTEPEATFSTCFGAPFMPRHPAEYGNLLRELIGKHGVDCWLV 427          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_AGRRK (Phosphoenolpyruvate carboxykinase [ATP] OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=pckA PE=3 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.616e-63
Identity = 117/226 (51.77%), Postives = 155/226 (68.58%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIK-FGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +F++++YL+P+R ++ +H   N+G +GD A               D  R LIGDDEH W +NG+ N EGGCYAK I LS E EP+I+   + FGTVLEN+V DEH    D  D S+TENTR+AYP+++IPNA    +  HP+ II+L  DAFGV+PP+++L+ EQ MYHF+SGYTA VAGTE+G  EP ATFS CFGA F+  HPT+Y  +L E + +HGA  WLV
Sbjct:  203 VFTVLNYLLPERGVMPMHCSANVGPEGDAAIFFGLSGTGKTTLSADPTRTLIGDDEHGWGENGIFNFEGGCYAKTIRLSAEAEPEIYETTRRFGTVLENVVLDEHGVP-DLDDGSLTENTRSAYPLDFIPNASESGMTGHPETIIMLTADAFGVMPPIARLTPEQAMYHFLSGYTAKVAGTEKGVVEPEATFSTCFGAPFMPRHPTEYGNLLKELIARHGAGCWLV 427          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_STAES (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pckA PE=3 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.417e-63
Identity = 117/225 (52.00%), Postives = 152/225 (67.56%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +FS+M+YL+P + I+S+H   N+G+ GDVA               D  R LIGDDEH W+ NGV NIEGGCYAK I LS++KEP I+NAIK+GT+LEN V ++    +D+ D + TENTRAAYPI+YI N   P    HP  II L  DAFGV+PP+SKL+ +Q MYHF+SG+T+ +AGTE G  EP+ +FS CFGA F+ L PTKYA +L   +  H    +LV
Sbjct:  203 IFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPKRKLIGDDEHGWNKNGVFNIEGGCYAKAIHLSKQKEPQIYNAIKYGTILENTVTNDDGT-IDFDDNTYTENTRAAYPIDYIENIVTPSKAAHPNTIIFLTADAFGVIPPISKLTKDQAMYHFLSGFTSKLAGTERGVTEPQPSFSTCFGAPFLPLSPTKYADLLGNLIDIHDVDVYLV 426          
The following BLAST results are available for this feature:
BLAST of FC931264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_GEOUR6.227e-6550.83Phosphoenolpyruvate carboxykinase [ATP] OS=Geobact... [more]
PCKA_BACSK4.036e-6451.53Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_RUBXD6.885e-6453.68Phosphoenolpyruvate carboxykinase [ATP] OS=Rubroba... [more]
PCKA_STAS12.003e-6352.00Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_SULDN2.616e-6353.71Phosphoenolpyruvate carboxykinase [ATP] OS=Sulfuri... [more]
PCKA_STAHJ2.616e-6352.44Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_SILPO2.616e-6348.96Phosphoenolpyruvate carboxykinase [ATP] OS=Silicib... [more]
PCKA_AGRT52.616e-6351.77Phosphoenolpyruvate carboxykinase [ATP] OS=Agrobac... [more]
PCKA_AGRRK2.616e-6351.77Phosphoenolpyruvate carboxykinase [ATP] OS=Agrobac... [more]
PCKA_STAES3.417e-6352.00Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]

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Properties
Property NameValue
Genbank descriptionC34103C07EF PostHarvP1 Citrus clementina cDNA clone C34103C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931264 ID=FC931264; Name=FC931264; organism=Citrus clementina; type=EST; length=724bp
GTCTATTCAGCTTAATGCATTACCTAATGCCTAAACGTCAAATCCTCTCC
CTCCACTCTGGCTGCAATATGGGAAAAGATGGGGATGTTGCCCTTTTCTT
CGGACTATCCGGTACTGGGAAGACAACTCTGTCTACTGATCATAACCGGT
ACTTAATTGGAGATGATGAGCACTGCTGGAGTGATAATGGAGTATCAAAC
ATTGAAGGCGGGTGCTATGCCAAATGCATTGATCTTTCAAGGGAGAAGGA
GCCTGATATCTGGAATGCCATCAAATTCGGGACTGTGCTAGAAAACATTG
TGTTTGATGAGCATACACGAGAAGTGGACTACTTGGACAAATCTGTCACG
GAGAACACTCGTGCCGCGTATCCCATAGAGTATATCCCAAATGCAAAGAT
ACCTTGTGTTGGCCCTCATCCAAAGAATATAATCCTTTTGGCTTGTGATG
CATTTGGTGTACTCCCACCTGTGAGCAAGTTGAGCTTGGAACAGACCATG
TACCACTTCATCAGTGGCTACACTGCTCTGGTTGCTGGAACAGAGGAAGG
TGCGAAGGAGCCACGGGCAACATTCTCAGCCTGTTTTGGTGCCGCATTTA
TAATGCTACACCCTACAAAGTATGCTGCCATGCTGGCTGAAAAAATGCAG
AAGCATGGGGCTACTGGATGGTTGGTTACACTGGCTGGTCAGGTGGAAGC
TATGGGTCNAGAATCGTATTAATT
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