FC931264

Overview
NameFC931264
Unique NameFC931264
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15351 contig Ccv1_Contig15351:261..985. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_STAAE (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain Newman) GN=pckA PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 4.463e-63
Identity = 118/225 (52.44%), Postives = 150/225 (66.67%), Query Frame = 3 
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +FS+M+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W+ NGV NIEGGCYAK I+LS+EKEP I++AIK+G +LEN V  E    VD+ D   TENTRAAYPI +I N  +P    HP  II L  DAFGV+PP+SKL+ +Q MYHF+SG+T+ +AGTE G  EP  +FS CFGA F  LHPT YA +L E +  H    +LV
Sbjct:  203 IFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAEDG-SVDFEDNRYTENTRAAYPINHIDNIVVPSKAAHPNTIIFLTADAFGVIPPISKLNKDQAMYHFLSGFTSKLAGTERGVTEPEPSFSTCFGAPFFPLHPTVYADLLGELIDLHDVDVYLV 426
[Close]
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_STAAC (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain COL) GN=pckA PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 4.463e-63
Identity = 118/225 (52.44%), Postives = 150/225 (66.67%), Query Frame = 3 
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +FS+M+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W+ NGV NIEGGCYAK I+LS+EKEP I++AIK+G +LEN V  E    VD+ D   TENTRAAYPI +I N  +P    HP  II L  DAFGV+PP+SKL+ +Q MYHF+SG+T+ +AGTE G  EP  +FS CFGA F  LHPT YA +L E +  H    +LV
Sbjct:  203 IFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAEDG-SVDFEDNRYTENTRAAYPINHIDNIVVPSKAAHPNTIIFLTADAFGVIPPISKLNKDQAMYHFLSGFTSKLAGTERGVTEPEPSFSTCFGAPFFPLHPTVYADLLGELIDLHDVDVYLV 426
[Close]
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_STAAB (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=pckA PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 4.463e-63
Identity = 118/225 (52.44%), Postives = 150/225 (66.67%), Query Frame = 3 
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +FS+M+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W+ NGV NIEGGCYAK I+LS+EKEP I++AIK+G +LEN V  E    VD+ D   TENTRAAYPI +I N  +P    HP  II L  DAFGV+PP+SKL+ +Q MYHF+SG+T+ +AGTE G  EP  +FS CFGA F  LHPT YA +L E +  H    +LV
Sbjct:  203 IFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAEDG-SVDFEDNRYTENTRAAYPINHIDNIVVPSKAAHPNTIIFLTADAFGVIPPISKLNKDQAMYHFLSGFTSKLAGTERGVTEPEPSFSTCFGAPFFPLHPTVYADLLGELIDLHDVDVYLV 426
[Close]
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_STAA9 (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain JH9) GN=pckA PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 4.463e-63
Identity = 118/225 (52.44%), Postives = 150/225 (66.67%), Query Frame = 3 
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +FS+M+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W+ NGV NIEGGCYAK I+LS+EKEP I++AIK+G +LEN V  E    VD+ D   TENTRAAYPI +I N  +P    HP  II L  DAFGV+PP+SKL+ +Q MYHF+SG+T+ +AGTE G  EP  +FS CFGA F  LHPT YA +L E +  H    +LV
Sbjct:  203 IFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAEDG-SVDFEDNRYTENTRAAYPINHIDNIVVPSKAAHPNTIIFLTADAFGVIPPISKLNKDQAMYHFLSGFTSKLAGTERGVTEPEPSFSTCFGAPFFPLHPTVYADLLGELIDLHDVDVYLV 426
[Close]
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_STAA8 (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain NCTC 8325) GN=pckA PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 4.463e-63
Identity = 118/225 (52.44%), Postives = 150/225 (66.67%), Query Frame = 3 
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +FS+M+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W+ NGV NIEGGCYAK I+LS+EKEP I++AIK+G +LEN V  E    VD+ D   TENTRAAYPI +I N  +P    HP  II L  DAFGV+PP+SKL+ +Q MYHF+SG+T+ +AGTE G  EP  +FS CFGA F  LHPT YA +L E +  H    +LV
Sbjct:  203 IFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAEDG-SVDFEDNRYTENTRAAYPINHIDNIVVPSKAAHPNTIIFLTADAFGVIPPISKLNKDQAMYHFLSGFTSKLAGTERGVTEPEPSFSTCFGAPFFPLHPTVYADLLGELIDLHDVDVYLV 426
[Close]
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_STAA3 (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain USA300) GN=pckA PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 4.463e-63
Identity = 118/225 (52.44%), Postives = 150/225 (66.67%), Query Frame = 3 
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +FS+M+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W+ NGV NIEGGCYAK I+LS+EKEP I++AIK+G +LEN V  E    VD+ D   TENTRAAYPI +I N  +P    HP  II L  DAFGV+PP+SKL+ +Q MYHF+SG+T+ +AGTE G  EP  +FS CFGA F  LHPT YA +L E +  H    +LV
Sbjct:  203 IFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAEDG-SVDFEDNRYTENTRAAYPINHIDNIVVPSKAAHPNTIIFLTADAFGVIPPISKLNKDQAMYHFLSGFTSKLAGTERGVTEPEPSFSTCFGAPFFPLHPTVYADLLGELIDLHDVDVYLV 426
[Close]
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_STAA2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain JH1) GN=pckA PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 4.463e-63
Identity = 118/225 (52.44%), Postives = 150/225 (66.67%), Query Frame = 3 
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +FS+M+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W+ NGV NIEGGCYAK I+LS+EKEP I++AIK+G +LEN V  E    VD+ D   TENTRAAYPI +I N  +P    HP  II L  DAFGV+PP+SKL+ +Q MYHF+SG+T+ +AGTE G  EP  +FS CFGA F  LHPT YA +L E +  H    +LV
Sbjct:  203 IFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAEDG-SVDFEDNRYTENTRAAYPINHIDNIVVPSKAAHPNTIIFLTADAFGVIPPISKLNKDQAMYHFLSGFTSKLAGTERGVTEPEPSFSTCFGAPFFPLHPTVYADLLGELIDLHDVDVYLV 426
[Close]
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_STAA1 (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=pckA PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 4.463e-63
Identity = 118/225 (52.44%), Postives = 150/225 (66.67%), Query Frame = 3 
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +FS+M+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W+ NGV NIEGGCYAK I+LS+EKEP I++AIK+G +LEN V  E    VD+ D   TENTRAAYPI +I N  +P    HP  II L  DAFGV+PP+SKL+ +Q MYHF+SG+T+ +AGTE G  EP  +FS CFGA F  LHPT YA +L E +  H    +LV
Sbjct:  203 IFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAEDG-SVDFEDNRYTENTRAAYPINHIDNIVVPSKAAHPNTIIFLTADAFGVIPPISKLNKDQAMYHFLSGFTSKLAGTERGVTEPEPSFSTCFGAPFFPLHPTVYADLLGELIDLHDVDVYLV 426
[Close]
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_RHOS4 (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=pckA PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 4.463e-63
Identity = 116/228 (50.88%), Postives = 154/228 (67.54%), Query Frame = 3 
Query:    3 LFSLMHYLMPKRQILSLHSGCN--MGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIW-NAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +F+L++Y++P + ++++H   N  +G   D A               D +R LIGDDEH WSD G  N EGGCYAK I+LS E EP+I+    KF TV+EN+V+DE T E+D+ D S+T NTR AYP++YI NA    +G HPKN+I+L CDAFGVLPP+++L+  Q MYHF+SG+T+ VAGTE G  EP+ TFS CFGA F+   P  Y  +L EK+ KHGAT WLV
Sbjct:  202 VFTLLNYILPGKGVMAMHCSANHALGDTDDAAVFFGLSGTGKTTLSADPSRTLIGDDEHGWSDRGTFNFEGGCYAKTINLSAEAEPEIYATTSKFATVVENMVYDEETLELDFNDDSLTANTRCAYPLDYISNASESGLGGHPKNVIMLTCDAFGVLPPIARLTPAQAMYHFLSGFTSKVAGTERGVTEPQPTFSTCFGAPFMPRRPEVYGKLLQEKIAKHGATCWLV 429
[Close]
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_RHOS1 (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=pckA PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 4.463e-63
Identity = 116/228 (50.88%), Postives = 154/228 (67.54%), Query Frame = 3 
Query:    3 LFSLMHYLMPKRQILSLHSGCN--MGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIW-NAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +F+L++Y++P + ++++H   N  +G   D A               D +R LIGDDEH WSD G  N EGGCYAK I+LS E EP+I+    KF TV+EN+V+DE T E+D+ D S+T NTR AYP++YI NA    +G HPKN+I+L CDAFGVLPP+++L+  Q MYHF+SG+T+ VAGTE G  EP+ TFS CFGA F+   P  Y  +L EK+ KHGAT WLV
Sbjct:  202 VFTLLNYILPGKGVMAMHCSANHALGDTDDAAVFFGLSGTGKTTLSADPSRTLIGDDEHGWSDRGTFNFEGGCYAKTINLSAEAEPEIYATTSKFATVVENMVYDEETLELDFNDDSLTANTRCAYPLDYISNASESGLGGHPKNVIMLTCDAFGVLPPIARLTPAQAMYHFLSGFTSKVAGTERGVTEPQPTFSTCFGAPFMPRRPEVYGKLLQEKIAKHGATCWLV 429
The following BLAST results are available for this feature:
BLAST of FC931264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_STAAE4.463e-6352.44Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAAC4.463e-6352.44Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAAB4.463e-6352.44Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAA94.463e-6352.44Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAA84.463e-6352.44Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAA34.463e-6352.44Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAA24.463e-6352.44Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAA14.463e-6352.44Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_RHOS44.463e-6350.88Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodoba... [more]
PCKA_RHOS14.463e-6350.88Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodoba... [more]

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Properties
Property NameValue
Genbank descriptionC34103C07EF PostHarvP1 Citrus clementina cDNA clone C34103C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931264 ID=FC931264; Name=FC931264; organism=Citrus clementina; type=EST; length=724bp
GTCTATTCAGCTTAATGCATTACCTAATGCCTAAACGTCAAATCCTCTCC
CTCCACTCTGGCTGCAATATGGGAAAAGATGGGGATGTTGCCCTTTTCTT
CGGACTATCCGGTACTGGGAAGACAACTCTGTCTACTGATCATAACCGGT
ACTTAATTGGAGATGATGAGCACTGCTGGAGTGATAATGGAGTATCAAAC
ATTGAAGGCGGGTGCTATGCCAAATGCATTGATCTTTCAAGGGAGAAGGA
GCCTGATATCTGGAATGCCATCAAATTCGGGACTGTGCTAGAAAACATTG
TGTTTGATGAGCATACACGAGAAGTGGACTACTTGGACAAATCTGTCACG
GAGAACACTCGTGCCGCGTATCCCATAGAGTATATCCCAAATGCAAAGAT
ACCTTGTGTTGGCCCTCATCCAAAGAATATAATCCTTTTGGCTTGTGATG
CATTTGGTGTACTCCCACCTGTGAGCAAGTTGAGCTTGGAACAGACCATG
TACCACTTCATCAGTGGCTACACTGCTCTGGTTGCTGGAACAGAGGAAGG
TGCGAAGGAGCCACGGGCAACATTCTCAGCCTGTTTTGGTGCCGCATTTA
TAATGCTACACCCTACAAAGTATGCTGCCATGCTGGCTGAAAAAATGCAG
AAGCATGGGGCTACTGGATGGTTGGTTACACTGGCTGGTCAGGTGGAAGC
TATGGGTCNAGAATCGTATTAATT
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