FC931264

Overview
NameFC931264
Unique NameFC931264
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_STACT (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus carnosus (strain TM300) GN=pckA PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 5.829e-63
Identity = 115/225 (51.11%), Postives = 155/225 (68.89%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +FS+M+YL+P++ I+S+H   N+G+ GDVA                 +R LIGDDEH W+ NG+ NIEGGCYAK I+LS+EKEP I++AI++GT+LEN+V +E    VD+ D   TENTRAAYPI+YI N   P    HP  I+ L  DAFGVLPP+SKL+ EQ +YHF+SG+T+ +AGTE G  EP  +FS CFGA F+ L+P +YA +L + + KH    +LV
Sbjct:  203 IFSVMNYLLPQQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSAAPDRKLIGDDEHGWNKNGIFNIEGGCYAKAINLSKEKEPQIYDAIRYGTILENVVVEEDGN-VDFDDNKYTENTRAAYPIDYIDNIAKPSKAAHPNTILFLTADAFGVLPPISKLTKEQALYHFLSGFTSKLAGTERGITEPVPSFSTCFGAPFLPLNPKRYAELLGQLIDKHEVEVYLV 426          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_GEOSM (Phosphoenolpyruvate carboxykinase [ATP] OS=Geobacter sp. (strain M21) GN=pckA PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 7.612e-63
Identity = 115/226 (50.88%), Postives = 153/226 (67.70%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +F++++YL+P++ ++S+H   N G+ G+VA                 NR LIGDDEH W D GV N EGGCYAK I+LS + EP+I+    KFGT+LEN+  D  +R +D  D S TENTRA+YPI +IPN      G HP ++I+L CDAFGVLPP+++L+  Q MYHF+SGYTA VAGTE G  EP+ATFSACFGA F+ L P+ YA +L +K+  H  + WLV
Sbjct:  203 IFTVLNYLLPQKGVMSMHCSANAGEKGEVAIFFGLSGTGKTTLSAAPNRLLIGDDEHGWDDAGVFNFEGGCYAKVINLSPQSEPEIYQCTRKFGTILENVAIDTISRRIDLDDASFTENTRASYPITHIPNIVGEGCGGHPNHVIMLTCDAFGVLPPIARLTPAQAMYHFLSGYTAKVAGTEAGVTEPQATFSACFGAPFMALRPSLYADLLGKKIASHKVSCWLV 428          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJR (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni (strain RM1221) GN=pckA PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 7.612e-63
Identity = 122/225 (54.22%), Postives = 149/225 (66.22%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +FS+M+Y +P    LS+H   N+G+  DVA               D  R LIGDDEH W D GV N EGGCYAK I+L+ E EP+I+ AIK   +LEN+V     + VDY D S TENTR +YPIE+I N +      HPKNII L+ DAFG+LPPVSKLS EQ MY+F+SGYTA VAGTE G  EP+ATFSACFG  F+ LHPT YA +L EK++KH    +LV
Sbjct:  196 IFSMMNYWLPLENKLSMHCSANVGEKDDVALFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDEGVFNFEGGCYAKTINLNPEHEPEIYGAIKRNALLENVVL-RADKSVDYADASKTENTRVSYPIEHIENHEPSLKAGHPKNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGEKIEKHEVNVYLV 419          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJD (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=pckA PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 7.612e-63
Identity = 122/225 (54.22%), Postives = 149/225 (66.22%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +FS+M+Y +P    LS+H   N+G+ GDVA               D  R LIGDDEH W D GV N EGGCYAK I+L  E EP+I+ AIK   +LEN+V     + VDY D S TENTR +YPIE+I N +      HPKNII L+ DAFG+LPPVSKLS EQ MY+F+SGYTA VAGTE G  EP+ATFSACFG  F+ LHPT YA +L EK++K+    +LV
Sbjct:  196 IFSMMNYWLPLENKLSMHCSANVGEKGDVALFFGLSGTGKTTLSTDPKRKLIGDDEHGWDDEGVFNFEGGCYAKTINLDPEHEPEIYGAIKRNALLENVVL-RADKSVDYADASKTENTRVSYPIEHIENHEPSLKAGHPKNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGEKIEKYEVNVYLV 419          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJJ (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=pckA PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 9.942e-63
Identity = 122/225 (54.22%), Postives = 148/225 (65.78%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +FS+M+Y +P    LS+H   N+G+  DVA               D  R LIGDDEH W D GV N EGGCYAK I+L  E EP+I+ AIK   +LEN+V     + VDY D S TENTR +YPIE+I N +      HPKNII L+ DAFG+LPPVSKLS EQ MY+F+SGYTA VAGTE G  EP+ATFSACFG  F+ LHPT YA +L EK++KH    +LV
Sbjct:  196 IFSMMNYWLPLENKLSMHCSANVGEKDDVALFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDEGVFNFEGGCYAKTINLDPEHEPEIYGAIKRNALLENVVL-RADKSVDYADASKTENTRVSYPIEHIENHEPSLKAGHPKNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGEKIEKHEVNVYLV 419          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJE (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni GN=pckA PE=1 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 9.942e-63
Identity = 122/225 (54.22%), Postives = 148/225 (65.78%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +FS+M+Y +P    LS+H   N+G+  DVA               D  R LIGDDEH W D GV N EGGCYAK I+L  E EP+I+ AIK   +LEN+V     + VDY D S TENTR +YPIE+I N +      HPKNII L+ DAFG+LPPVSKLS EQ MY+F+SGYTA VAGTE G  EP+ATFSACFG  F+ LHPT YA +L EK++KH    +LV
Sbjct:  196 IFSMMNYWLPLENKLSMHCSANVGEKDDVALFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDEGVFNFEGGCYAKTINLDPEHEPEIYGAIKRNALLENVVL-RADKSVDYADASKTENTRVSYPIEHIENHEPSLKAGHPKNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGEKIEKHEVNVYLV 419          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJ8 (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=pckA PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 9.942e-63
Identity = 122/225 (54.22%), Postives = 148/225 (65.78%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +FS+M+Y +P    LS+H   N+G+  DVA               D  R LIGDDEH W D GV N EGGCYAK I+L  E EP+I+ AIK   +LEN+V     + VDY D S TENTR +YPIE+I N +      HPKNII L+ DAFG+LPPVSKLS EQ MY+F+SGYTA VAGTE G  EP+ATFSACFG  F+ LHPT YA +L EK++KH    +LV
Sbjct:  196 IFSMMNYWLPLENKLSMHCSANVGEKDDVALFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDEGVFNFEGGCYAKTINLDPEHEPEIYGAIKRNALLENVVL-RADKSVDYADASKTENTRVSYPIEHIENHEPSLKAGHPKNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGEKIEKHEVNVYLV 419          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_RHIL3 (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=pckA PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.298e-62
Identity = 116/226 (51.33%), Postives = 154/226 (68.14%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +F++++YL+P + ++ +H   N+G DGD A               D  R LIGDDEH WS+NG+ N EGGCYAK I LS E EP+I+    +FGTVLEN+V +E +RE D+ D S+TENTR AYP+++IPNA       HPK II+L  DAFGV+PP+++L+ +Q MYHF+SGYTA VAGTE+G  EP ATFS CFGA F+  HP +Y  +L E + +HG   WLV
Sbjct:  203 VFTVLNYLLPAKGVMPMHCSANVGPDGDAAVFFGLSGTGKTTLSADPARTLIGDDEHGWSENGIFNFEGGCYAKTIRLSAEAEPEIYATTQRFGTVLENVVLNE-SREPDFNDGSLTENTRCAYPMDFIPNASKTGRAGHPKTIIMLTADAFGVMPPIARLTPDQAMYHFLSGYTAKVAGTEKGVVEPEATFSTCFGAPFMPRHPAEYGNLLKELIGRHGVQCWLV 427          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_PELPD (Phosphoenolpyruvate carboxykinase [ATP] OS=Pelobacter propionicus (strain DSM 2379) GN=pckA PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.696e-62
Identity = 116/227 (51.10%), Postives = 151/227 (66.52%), Query Frame = 3
Query:    3 LFSLMHYLMP-KRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIK-FGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +F++++Y++P +++ILS+H   N+G  GD A               D +R LIGDDEH W D G+ N EGGCYAK I L  E EP+I+   + FGT+LEN+  +  TR VD  D S TENTRA+YP+ +IPN     +  HP NII+L CDA+GVLPP+S L+ EQ MYHF+SGYTA VAGTE G KEP ATFS CFG  F+ L+PT Y  +L EK+ +H  + WLV
Sbjct:  203 IFTILNYILPVEKKILSMHCSANVGPKGDSAVFFGLSGTGKTTLSADSSRALIGDDEHGWDDKGLFNFEGGCYAKIIRLCPESEPEIFATTRRFGTILENVAINTRTRRVDLDDDSFTENTRASYPLTHIPNIVPSGIAGHPANIIMLTCDAYGVLPPISHLTKEQAMYHFLSGYTARVAGTEAGVKEPTATFSTCFGGPFMALNPTVYGELLREKISRHNVSCWLV 429          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_FUSNN (Phosphoenolpyruvate carboxykinase [ATP] OS=Fusobacterium nucleatum subsp. nucleatum GN=pckA PE=3 SV=2)

HSP 1 Score: 239.195 bits (609), Expect = 1.696e-62
Identity = 116/236 (49.15%), Postives = 152/236 (64.41%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGK-DGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVTLAGQVEAMG 707
            +FS+M+Y+MP   IL +H   NM     + A               D NR LIGDDEH W D G+ N EGGCYAKCI+L  E EP+I+ AIKFG+++EN+V D  TR++ Y D S+T NTR  YPI+YIPNA++  VG  PK +I L  D+FGVLPP+S+LS E  MYHF++G+TA +AGTE G KEP  TFS CFG  F+ + P+ YA ML E+++KH    +L+       A G
Sbjct:  194 VFSIMNYIMPHENILPMHCSANMDPVTHETAIFFGLSGTGKTTLSADPNRKLIGDDEHGWCDKGIFNFEGGCYAKCINLKEESEPEIYRAIKFGSLVENVVVDPITRKIQYEDASITPNTRVGYPIDYIPNAELSGVGGIPKVVIFLTADSFGVLPPISRLSQEAAMYHFVTGFTAKLAGTELGVKEPVPTFSTCFGEPFMPMDPSVYAEMLGERLKKHNTKVYLINTGWSGGAYG 429          
The following BLAST results are available for this feature:
BLAST of FC931264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_STACT5.829e-6351.11Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_GEOSM7.612e-6350.88Phosphoenolpyruvate carboxykinase [ATP] OS=Geobact... [more]
PCKA_CAMJR7.612e-6354.22Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]
PCKA_CAMJD7.612e-6354.22Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]
PCKA_CAMJJ9.942e-6354.22Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]
PCKA_CAMJE9.942e-6354.22Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]
PCKA_CAMJ89.942e-6354.22Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]
PCKA_RHIL31.298e-6251.33Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobi... [more]
PCKA_PELPD1.696e-6251.10Phosphoenolpyruvate carboxykinase [ATP] OS=Pelobac... [more]
PCKA_FUSNN1.696e-6249.15Phosphoenolpyruvate carboxykinase [ATP] OS=Fusobac... [more]

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Properties
Property NameValue
Genbank descriptionC34103C07EF PostHarvP1 Citrus clementina cDNA clone C34103C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931264 ID=FC931264; Name=FC931264; organism=Citrus clementina; type=EST; length=724bp
GTCTATTCAGCTTAATGCATTACCTAATGCCTAAACGTCAAATCCTCTCC
CTCCACTCTGGCTGCAATATGGGAAAAGATGGGGATGTTGCCCTTTTCTT
CGGACTATCCGGTACTGGGAAGACAACTCTGTCTACTGATCATAACCGGT
ACTTAATTGGAGATGATGAGCACTGCTGGAGTGATAATGGAGTATCAAAC
ATTGAAGGCGGGTGCTATGCCAAATGCATTGATCTTTCAAGGGAGAAGGA
GCCTGATATCTGGAATGCCATCAAATTCGGGACTGTGCTAGAAAACATTG
TGTTTGATGAGCATACACGAGAAGTGGACTACTTGGACAAATCTGTCACG
GAGAACACTCGTGCCGCGTATCCCATAGAGTATATCCCAAATGCAAAGAT
ACCTTGTGTTGGCCCTCATCCAAAGAATATAATCCTTTTGGCTTGTGATG
CATTTGGTGTACTCCCACCTGTGAGCAAGTTGAGCTTGGAACAGACCATG
TACCACTTCATCAGTGGCTACACTGCTCTGGTTGCTGGAACAGAGGAAGG
TGCGAAGGAGCCACGGGCAACATTCTCAGCCTGTTTTGGTGCCGCATTTA
TAATGCTACACCCTACAAAGTATGCTGCCATGCTGGCTGAAAAAATGCAG
AAGCATGGGGCTACTGGATGGTTGGTTACACTGGCTGGTCAGGTGGAAGC
TATGGGTCNAGAATCGTATTAATT
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