FC931264

Overview
NameFC931264
Unique NameFC931264
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15351 contig Ccv1_Contig15351:261..985. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_RHIEC (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=pckA PE=3 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.215e-62
Identity = 116/226 (51.33%), Postives = 152/226 (67.26%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +F++++YL+P + ++ +H   N+G DGD A               D  R LIGDDEH WS+NG+ N EGGCYAK I LS E EP+I+    +FGTVLEN+V +E  RE D+ D S+TENTR AYP+ +IPNA       HPK II+L  DAFGV+PP+++L+ +Q MYHF+SGYTA VAGTE+G  EP ATFS CFGA F+  HP +Y  +L E + +HG   WLV
Sbjct:  203 VFTVLNYLLPAKGVMPMHCSANVGPDGDAAVFFGLSGTGKTTLSADPARTLIGDDEHGWSENGIFNFEGGCYAKTIRLSAEAEPEIYATTQRFGTVLENVVLNER-REPDFDDGSLTENTRCAYPMHFIPNASETGRAGHPKTIIMLTADAFGVMPPIARLTPDQAMYHFLSGYTAKVAGTEKGVVEPEATFSTCFGAPFMPRHPAEYGNLLKELISRHGVECWLV 427          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_SINMW (Phosphoenolpyruvate carboxykinase [ATP] OS=Sinorhizobium medicae (strain WSM419) GN=pckA PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.893e-62
Identity = 118/239 (49.37%), Postives = 154/239 (64.44%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVTLAGQVEAMGXES 716
            +F++++YL+P++ ++ +H   N+G  GD A               D NR LIGDDEH W + GV N EGGCYAK I LS   EP+I+    +FGTV+EN+V DE  R  D+ D S+TENTR AYP+ +IPNA      P P+ II+L  DAFGVLPP++KL+ EQ MYHF+SGYTA VAGTE+G  EP ATFS CFGA F+  HP++Y  +L E + ++G T WLV       A G  S
Sbjct:  203 VFTVLNYLLPRKSVMPMHCSANVGPAGDTAIFFGLSGTGKTTLSADPNRTLIGDDEHGWGEKGVFNFEGGCYAKAIRLSEAAEPEIFATTQRFGTVMENVVLDER-RMPDFEDGSLTENTRCAYPLHFIPNASKTGTAPQPRTIIMLTADAFGVLPPIAKLTPEQAMYHFLSGYTAKVAGTEKGVTEPEATFSTCFGAPFMPRHPSEYGNLLKELIARNGVTCWLVNTGWTGGAYGTGS 440          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_VIBPA (Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio parahaemolyticus GN=pckA PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.778e-62
Identity = 121/226 (53.54%), Postives = 150/226 (66.37%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +F++M+Y +P + I S+H   NMGKDGDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS+E EPDI+NAI+   +LEN+        +D+ D S TENTR +YPI +I N   P   G H   +I L+ DAFGVLPPVSKL+ EQT YHF+SG+TA +AGTE G  EP  TFSACFGAAF+ LHPTKYA +L ++M+  GA  +LV
Sbjct:  216 MFAMMNYFLPLKDIASMHCSANMGKDGDVAVFFGLSGTGKTTLSTDPKRALIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPDIYNAIRRDALLENVTV-RSDGSIDFDDGSKTENTRVSYPIYHIENIVKPVSKGGHANKVIFLSADAFGVLPPVSKLTPEQTKYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLTLHPTKYAEVLVKRMEAAGAEAYLV 440          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_RHIME (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobium meliloti GN=pckA PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.778e-62
Identity = 118/239 (49.37%), Postives = 155/239 (64.85%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIK-FGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVTLAGQVEAMGXES 716
            +F++++YL+P++ ++ +H   N+G  GD A               D NR LIGDDEH WS+ GV N EGGCYAK I LS   EP+I+   + FGTV+EN+V DE  R  D+ D S+TENTR AYP+ +IPNA      P P+ II+L  DAFGVLPP++KL+ EQ MYHF+SGYTA VAGTE+G  EP ATFS CFGA F+  HP++Y  +L + + ++G T WLV       A G  S
Sbjct:  203 VFTVLNYLLPEKSVMPMHCSANVGPAGDTAIFFGLSGTGKTTLSADPNRTLIGDDEHGWSEKGVFNFEGGCYAKAIRLSEAAEPEIFATTRRFGTVMENVVLDER-RLPDFDDGSLTENTRCAYPLHFIPNASKTGTAPQPRTIIMLTADAFGVLPPIAKLTPEQAMYHFLSGYTAKVAGTEKGVTEPEATFSTCFGAPFMPRHPSEYGNLLKDLIARNGVTCWLVNTGWTGGAFGTGS 440          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_EUBE2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=pckA PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.778e-62
Identity = 122/227 (53.74%), Postives = 153/227 (67.40%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGD-VAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVG-PHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +FS+M+Y +P + I S+H   N  K+G+  A               D  R LIGDDEH W DNGV N EGGCYAK I+L ++ EPDI+NAIK   +LEN+  DE+ + +D+ DKSVTENTR +YPI +I N   P    P  KN+I L+ DAFGVLPPVS L+ EQT Y+F+SG+TA +AGTE G  EP  TFSACFG AF+ LHPTKYAA L +KM+K GA  +LV
Sbjct:  208 MFSMMNYYLPLKGIASMHCSANTDKNGENTAIFFGLSGTGKTTLSTDPKRLLIGDDEHGWDDNGVFNFEGGCYAKVINLDKDSEPDIYNAIKRNALLENVTLDENGK-IDFADKSVTENTRVSYPINHIENIVRPISSAPAAKNVIFLSADAFGVLPPVSILTPEQTQYYFLSGFTAKLAGTERGITEPTPTFSACFGQAFLELHPTKYAAELVKKMEKSGAKAYLV 433          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_ERWT9 (Phosphoenolpyruvate carboxykinase [ATP] OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=pckA PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.778e-62
Identity = 121/226 (53.54%), Postives = 149/226 (65.93%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            LF++M+YL+P + I S+H   N+G DGDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS + EP+I+ AI+   +LEN+V   H   VDY D S TENTR +YPI +I N   P     H K +I L  DAFGVLPPVS+L+ +QT YHF+SG+TA +AGTE G  EP  TFSACFGAAF+ LHPT+YA +L ++MQ  GA  WLV
Sbjct:  214 LFAIMNYLLPLKGIASMHCSANVGADGDVAVFFGLSGTGKTTLSTDPQRQLIGDDEHGWDDDGVFNFEGGCYAKTIKLSPQAEPEIYQAIRRDALLENVVV-RHDGSVDYDDGSKTENTRVSYPIYHIDNIVKPVSKAGHAKKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLTLHPTQYAEVLVKRMQAAGAEAWLV 438          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_RHISN (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobium sp. (strain NGR234) GN=pckA PE=3 SV=2)

HSP 1 Score: 237.654 bits (605), Expect = 4.934e-62
Identity = 118/239 (49.37%), Postives = 155/239 (64.85%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIW-NAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVTLAGQVEAMGXES 716
            +F++++YL+P + ++ +H   N+G  GD A               D NR LIGDDEH WSD GV N EGGCYAK I LS   EP+I+    +FGTV+EN+V DE  R  D+ + S+TENTR AYP+++IPNA      P P+ II+L  DAFGVLPP++KL+ EQ MYHF+SGYTA VAGTE+G  EP ATFS CFGA F+  HP++Y  +L + + ++G T WLV       A G  S
Sbjct:  203 VFTVLNYLLPNKAVMPMHCSANVGPAGDTAIFFGLSGTGKTTLSADPNRTLIGDDEHGWSDKGVFNFEGGCYAKAIRLSEAAEPEIFATTRRFGTVMENVVLDER-RAPDFDNGSLTENTRIAYPLDFIPNASETGTAPQPRTIIMLTADAFGVLPPIAKLTPEQAMYHFLSGYTAKVAGTEKGVTEPEATFSTCFGAPFMPRHPSEYGNLLKDLIARNGVTCWLVNTGWTGGAYGTGS 440          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_DINSH (Phosphoenolpyruvate carboxykinase [ATP] OS=Dinoroseobacter shibae (strain DFL 12) GN=pckA PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 4.934e-62
Identity = 119/241 (49.38%), Postives = 153/241 (63.49%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCN--MGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIK-FGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVTLAGQVEAMGXES 716
            +F+L++Y++P++ I+ +H   N  +G   D A               D  R LIGDDEH WS+ G  N EGGCYAK I+LS E EP+I+   + FGTV+EN+VFD  T ++D+ D S+T N R AYP+ YI NA    +G HPKNII+L CDAFGVLPP+S+L+  Q MYHF+SG+T+ VAGTE G  EP  TFS CFGA F+   P  Y  +L EK+ KHGAT WLV       A G  S
Sbjct:  202 VFTLLNYMLPEKGIMPMHCSANHAVGNPVDTAVFFGLSGTGKTTLSADPERVLIGDDEHGWSERGTFNFEGGCYAKTINLSAEAEPEIYATTEMFGTVIENMVFDPETLDLDFEDDSLTANMRCAYPLNYISNASETALGGHPKNIIMLTCDAFGVLPPISRLTPAQAMYHFLSGFTSKVAGTERGVTEPEPTFSTCFGAPFMPRRPEVYGKLLQEKIAKHGATCWLVNTGWTGGAYGTGS 442          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_BRASB (Phosphoenolpyruvate carboxykinase [ATP] OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=pckA PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 4.934e-62
Identity = 117/227 (51.54%), Postives = 150/227 (66.08%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEG-AKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +F+ ++Y +P+R ++ +H   N+G  GD A               D NR LIGDDEH W  +GV N EGGCYAKCI LS+E EP I+ A  +FG VLEN+V DE +R  D+ D S TENTR+AYP++YIPNA      PHPKN+++LA DAFGVLPP++KLS  Q MYHF+SGYTA VAGTE G   EP+  FS CFG+ F+ L P+ Y  ML + + +H    WLV
Sbjct:  202 VFTTLNYYLPERGVMPMHCSANVGPKGDTAIFFGLSGTGKTTLSADPNRTLIGDDEHGWGPSGVFNFEGGCYAKCIKLSQEAEPQIFAASNRFGAVLENVVLDEDSRVPDFDDGSKTENTRSAYPLDYIPNASRTGRAPHPKNVVMLAADAFGVLPPIAKLSPAQAMYHFLSGYTAKVAGTERGLGNEPQPEFSTCFGSPFLPLDPSVYGNMLRQLIAEHNVDCWLV 428          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_MANSM (Phosphoenolpyruvate carboxykinase [ATP] OS=Mannheimia succiniciproducens (strain MBEL55E) GN=pckA PE=3 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 8.416e-62
Identity = 124/227 (54.63%), Postives = 153/227 (67.40%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPC--VGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +FS+M+Y +P R I S+H   N+GKDGD A               D  R LIGDDEH W D GV N EGGCYAK I+LS E EPDI+ AIK   +LEN+V  ++  +VDY D S TENTR +YPI +I N   P    GP  K +I L+ DAFGVLPPVSKL+ EQT Y+F+SG+TA +AGTE G  EP  TFSACFGAAF+ LHPT+YA +L ++MQ+ GA  +LV
Sbjct:  213 MFSMMNYFLPLRGIASMHCSANVGKDGDTAIFFGLSGTGKTTLSTDPKRQLIGDDEHGWDDEGVFNFEGGCYAKTINLSAENEPDIYGAIKRDALLENVVVLDNG-DVDYADGSKTENTRVSYPIYHIQNIVKPVSKAGPATK-VIFLSADAFGVLPPVSKLTPEQTKYYFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQESGAEAYLV 437          
The following BLAST results are available for this feature:
BLAST of FC931264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_RHIEC2.215e-6251.33Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobi... [more]
PCKA_SINMW2.893e-6249.37Phosphoenolpyruvate carboxykinase [ATP] OS=Sinorhi... [more]
PCKA_VIBPA3.778e-6253.54Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio ... [more]
PCKA_RHIME3.778e-6249.37Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobi... [more]
PCKA_EUBE23.778e-6253.74Phosphoenolpyruvate carboxykinase [ATP] OS=Eubacte... [more]
PCKA_ERWT93.778e-6253.54Phosphoenolpyruvate carboxykinase [ATP] OS=Erwinia... [more]
PCKA_RHISN4.934e-6249.37Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobi... [more]
PCKA_DINSH4.934e-6249.38Phosphoenolpyruvate carboxykinase [ATP] OS=Dinoros... [more]
PCKA_BRASB4.934e-6251.54Phosphoenolpyruvate carboxykinase [ATP] OS=Bradyrh... [more]
PCKA_MANSM8.416e-6254.63Phosphoenolpyruvate carboxykinase [ATP] OS=Mannhei... [more]

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Properties
Property NameValue
Genbank descriptionC34103C07EF PostHarvP1 Citrus clementina cDNA clone C34103C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931264 ID=FC931264; Name=FC931264; organism=Citrus clementina; type=EST; length=724bp
GTCTATTCAGCTTAATGCATTACCTAATGCCTAAACGTCAAATCCTCTCC
CTCCACTCTGGCTGCAATATGGGAAAAGATGGGGATGTTGCCCTTTTCTT
CGGACTATCCGGTACTGGGAAGACAACTCTGTCTACTGATCATAACCGGT
ACTTAATTGGAGATGATGAGCACTGCTGGAGTGATAATGGAGTATCAAAC
ATTGAAGGCGGGTGCTATGCCAAATGCATTGATCTTTCAAGGGAGAAGGA
GCCTGATATCTGGAATGCCATCAAATTCGGGACTGTGCTAGAAAACATTG
TGTTTGATGAGCATACACGAGAAGTGGACTACTTGGACAAATCTGTCACG
GAGAACACTCGTGCCGCGTATCCCATAGAGTATATCCCAAATGCAAAGAT
ACCTTGTGTTGGCCCTCATCCAAAGAATATAATCCTTTTGGCTTGTGATG
CATTTGGTGTACTCCCACCTGTGAGCAAGTTGAGCTTGGAACAGACCATG
TACCACTTCATCAGTGGCTACACTGCTCTGGTTGCTGGAACAGAGGAAGG
TGCGAAGGAGCCACGGGCAACATTCTCAGCCTGTTTTGGTGCCGCATTTA
TAATGCTACACCCTACAAAGTATGCTGCCATGCTGGCTGAAAAAATGCAG
AAGCATGGGGCTACTGGATGGTTGGTTACACTGGCTGGTCAGGTGGAAGC
TATGGGTCNAGAATCGTATTAATT
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