FC931267

Overview
NameFC931267
Unique NameFC931267
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length741
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: CBIO1_BACSU (Cobalt import ATP-binding protein cbiO 1 OS=Bacillus subtilis GN=cbiO1 PE=3 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 2.353e-14
Identity = 61/230 (26.52%), Postives = 113/230 (49.13%), Query Frame = 3
Query:   66 IKFEDVVLRYRPELPP-VLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSP--VLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIR--EEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELLSM 740
            I  ED+V RYR +     L G+S  +   + + IVG  G+GKS++   L  ++  E G I + G  + +  + ++RK +G++ Q+P       TVR ++    E++     E +ER     A+++  + +   + +   + S GQ+Q             I++LDEAT+ +D      + +T+R  +E    T++ I H LN     DRI++++ G+      PEE+  +
Sbjct:    7 ISVEDIVFRYRKDAERRALDGVSLQVYEGEWLAIVGHNGSGKSTLARALNGLILPESGDIEVAGIQLTEESVWEVRKKIGMVFQNPDNQFVGTTVRDDVAFGLENNGVPREEMIERVDW--AVKQ--VNMQDFLDQEPHHLSGGQKQRVAIAGVIAARPDIIILDEATSMLDPIGREEVLETVRHLKEQGMATVISITHDLNEAAKADRIIVMNGGKKYAEGPPEEIFKL 232          
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: Y2153_ENTFA (Putative ABC transporter ATP-binding protein EF_2153 OS=Enterococcus faecalis GN=EF_2153 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.073e-14
Identity = 75/237 (31.65%), Postives = 122/237 (51.48%), Query Frame = 3
Query:   66 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSM---LNTLF-RIVELE-RGRILIDGFDIAKFGLMDLRKILG-IIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNS--LGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVR----TDALIQKTIREEFKSCTMLIIAHRLNTII--DCDRILLLDSGRVL*YDTPEELL 734
            I F +   +Y  +  P L G+  TI   +KV IVG +G+GKS++   +N L   I E E +G   + G +I +  L DL   +G ++  +   F G        F+  +D     A+E+A +K A+++ S  + L+  +    ++ S GQ+Q            KIL+ DE  A +D R    T  LI  TI++E K+ T+LII HRL  ++    DRI++++ G ++   TP+ELL
Sbjct:    6 ITFNNFSFQYHSQSEPTLKGIQLTIYEGEKVLIVGPSGSGKSTLAQCINGLIPNIYEGEIQGTATVAGKNIQETSLFDLSFDVGTVLQDTDGQFIGLTVAEDIAFALEND-----AVEQAEMKKAVQKWSEIVELNQLLQHRPQDLSGGQKQRVSMAGVLINQSKILLFDEPLANLDPRAGQETMTLID-TIQQETKA-TVLIIEHRLEDVLCESVDRIIVMNEGTIISDTTPDELL 235          
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: Y1037_METMA (Putative ABC transporter ATP-binding protein MM_1037 OS=Methanosarcina mazei GN=MM_1037 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.073e-14
Identity = 66/228 (28.95%), Postives = 113/228 (49.56%), Query Frame = 3
Query:   66 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG-LMDLRKILGIIPQSP-VLFSG-TVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIRE-EFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELLS 737
            I+ E+V   Y P+  P L  ++ TI   + +GI+GR G+GKS++   L  +   ++G++++ G D   F  L ++RKI+GI+ Q+P   F G TV  +L    E+      E  +R     A     + L+     + ++ S GQ Q            + LV DE T+ +D  +   + + I++   K  T++   H L  +   DRIL++D GR++    PE +LS
Sbjct:    2 IRLENVSYCY-PDGTPALTNINLTIRKGEYLGIIGRNGSGKSTLALHLNGLRRPQKGKVIVKGIDAGDFSKLQEVRKIVGIVFQNPETQFIGRTVEEDLAFGPENLCLPPTEIRKRVDRALA----EIKLEKYRHHSPKSLSGGQGQCVALAGVLTMEPECLVFDEVTSMLDPDSGETVLRRIKKLHEKGKTIVYTTHNLEELHVADRILVMDRGRIVLEGEPENVLS 224          
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: METN_XANCP (Methionine import ATP-binding protein metN OS=Xanthomonas campestris pv. campestris GN=metN PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.073e-14
Identity = 66/212 (31.13%), Postives = 107/212 (50.47%), Query Frame = 3
Query:  117 LHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKF---GLMDLRKILGIIPQSPVLFS-----GTVRFNLD----PFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVL 707
            LH L   I P +  GI+G +GAGKS+++  + R+ E   GR+LI   D+      GL  LR+ +G+I Q   L S     G V F L+    P +E  DA + E L R           +GL+   ++     S GQ+Q            +IL+ DEAT+A+D +T A + + + +  +    T+++I H +  I   CDR+ +LD+G+++
Sbjct:   21 LHPLDLRIGPGEVFGIIGHSGAGKSTLIRLINRLEEPTGGRLLIGDEDVTALNSTGLRALRRRVGMIFQHFNLLSSRTVAGNVAFPLELAGTPRAE-IDARVAELLAR-----------VGLEQHATKYPAQLSGGQKQRVGIARALATRPQILLCDEATSALDPQTTASVLQLLAQINRELGLTIVLITHEMEVIRRVCDRVAVLDAGKLV 220          
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: METN_XANC8 (Methionine import ATP-binding protein metN OS=Xanthomonas campestris pv. campestris (strain 8004) GN=metN PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.073e-14
Identity = 66/212 (31.13%), Postives = 107/212 (50.47%), Query Frame = 3
Query:  117 LHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKF---GLMDLRKILGIIPQSPVLFS-----GTVRFNLD----PFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVL 707
            LH L   I P +  GI+G +GAGKS+++  + R+ E   GR+LI   D+      GL  LR+ +G+I Q   L S     G V F L+    P +E  DA + E L R           +GL+   ++     S GQ+Q            +IL+ DEAT+A+D +T A + + + +  +    T+++I H +  I   CDR+ +LD+G+++
Sbjct:   21 LHPLDLRIGPGEVFGIIGHSGAGKSTLIRLINRLEEPTGGRLLIGDEDVTALNSTGLRALRRRVGMIFQHFNLLSSRTVAGNVAFPLELAGTPRAE-IDARVAELLAR-----------VGLEQHATKYPAQLSGGQKQRVGIARALATRPQILLCDEATSALDPQTTASVLQLLAQINRELGLTIVLITHEMEVIRRVCDRVAVLDAGKLV 220          
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: METN_XANAC (Methionine import ATP-binding protein metN OS=Xanthomonas axonopodis pv. citri GN=metN PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.073e-14
Identity = 66/212 (31.13%), Postives = 108/212 (50.94%), Query Frame = 3
Query:  117 LHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIA---KFGLMDLRKILGIIPQSPVLFS-----GTVRFNLD----PFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVL 707
            LH L   I P +  GI+G +GAGKS+++  + R+ E   GR+LI   D+    + GL  LR+ +G+I Q   L S     G V F L+    P +E  DA + E L R           +GL    ++     S GQ+Q            +IL+ DEAT+A+D +T A + + + +  +    T+++I H ++ I   CDR+ +LD+G+++
Sbjct:   21 LHPLDLRIGPGEVFGIIGHSGAGKSTLIRLINRLEEPSGGRLLIGEEDVTALDRQGLRALRRRIGMIFQHFNLLSSRTVAGNVAFPLELAGTPRAE-IDARVAELLAR-----------VGLQEHANKYPAQLSGGQKQRVGIARALATRPQILLCDEATSALDPQTTASVLQLLAQINRELGLTIVLITHEMDVIRRVCDRVAVLDAGKLV 220          
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: METN2_PSEU2 (Methionine import ATP-binding protein metN 2 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=metN2 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.073e-14
Identity = 66/233 (28.33%), Postives = 111/233 (47.64%), Query Frame = 3
Query:   66 IKFEDVVLRYRPELPPV--LHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG---LMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNS-----------LGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIRE--EFKSCTMLIIAHRLNTIID-CDRILLLDSGRVL 707
            ++F ++   Y  +  PV  L  +   +   +  GI+GR+GAGKSS++ T+ R+ +   GR+LID  DI +F    L++LR+ +G+I Q          FNL      S  ++W+ +E       + R             +GL  +        S GQ+Q             IL+ DEAT+A+D  T   I   +RE  +    T+++I H +  I D C R+++L+ GR++
Sbjct:   34 VRFINLGKTYHGKQGPVEALGNIDLAVQHGEIFGIIGRSGAGKSSLIRTINRLEQPSNGRVLIDQVDIGEFDEDKLVELRRRIGMIFQ---------HFNL-----MSAKNVWQNVELPLKVAGVPREQRARKVAQLLELVGLQDKHKAYPAQLSGGQKQRVGIARALVHDPAILLCDEATSALDPETTQSILGLLREINQRLGLTIVLITHEMAVIRDICHRVVVLEQGRIV 252          
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: MCJD_ECOLX (Microcin-J25 export ATP-binding/permease protein mcjD OS=Escherichia coli GN=mcjD PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.073e-14
Identity = 48/199 (24.12%), Postives = 99/199 (49.75%), Query Frame = 3
Query:  114 VLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL 707
            +L+ +S  +       + G +G+GKS+++  +    +   G I ++   +      DL   +  + Q   +F  T+RFNL   + + S+ ++++ L+ A+L   +    + LD  +   G N+S GQ+Q             I+++DEAT+A+D   ++ I  +IR  F    ++ I+HR+N +   D + +L+ G ++
Sbjct:  360 ILNSVSLDLFTGKMYSLTGPSGSGKSTLVKIISGYYKNYFGDIYLNDISLRNISDEDLNDAIYYLTQDDYIFMDTLRFNLRLANYDASENEIFKVLKLANLS-VVNNEPVSLDTHLINRGNNYSGGQKQRISLARLFLRKPAIIIIDEATSALDYINESEILSSIRTHFPDALIINISHRINLLECSDCVYVLNEGNIV 557          
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: CBIO_MOOTA (Cobalt import ATP-binding protein cbiO OS=Moorella thermoacetica (strain ATCC 39073) GN=cbiO PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.073e-14
Identity = 60/212 (28.30%), Postives = 107/212 (50.47%), Query Frame = 3
Query:  111 PVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIA-KFGLMDLRKILGIIPQSP--VLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVD-VRTDALIQKTIR-EEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEEL 731
            P L  +   I P + + I G  G+GKS++   L  ++   +GR+L+DG D      L+ +R+ +G++ Q P   L + TV  ++    E+      E  +R  L  A+R  S+GL+   +      S GQ+Q            + LVLDEATA +D V  + ++++ +R  + +   +++I H +   +  DR+L++ SGR+    +P EL
Sbjct:   17 PALEKIDLAIEPGEFLAITGPNGSGKSTLARLLNGLLRPRQGRVLVDGMDTGDDTALITIRRRVGMVFQDPDNQLVAATVAEDVAFGLENLGLPPAEIEKRVDL--ALR--SVGLEDLAARPPHLLSGGQKQRLALAGVLAMEPRYLVLDEATAMLDPVAREEILEQVLRLRQEQGIAIILITHLMEEAVRADRMLIMKSGRIFWQGSPREL 224          
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: CBIO_METTH (Putative cobalt import ATP-binding protein cbiO OS=Methanobacterium thermoautotrophicum GN=cbiO PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.073e-14
Identity = 64/235 (27.23%), Postives = 117/235 (49.79%), Query Frame = 3
Query:   66 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDG--FDIAKFGLMDLRKILGIIPQSP--VLFSGTVR-------FNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRT-DALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVL*YDTPEEL 731
            I+  D+   Y P+  P L G++  +   ++V ++G  GAGKS++   L  I++   G ++IDG   D +K  L+ +R+ +GI+ Q+P   LFS TVR        NL    +  +  + E+LE+           +G+    + A  + S G+++            +I+VLDE T  +D  T D +I+  +    +  T++I +H +  I    +R+ +L+SG ++   TP E+
Sbjct:    2 IELRDLSYSY-PDGTPALRGINMKVERGERVAVIGPNGAGKSTLFLHLNGILKPAAGEVIIDGERVDYSKDELIKIRQKVGIVFQNPDDQLFSPTVREDVAFGPMNLGLPEDEVEERVAESLEK-----------VGMSGYENRAPHHLSGGEKKRVAIAGILAMKPEIMVLDEPTTGLDPETADGIIRILLELSREGITVMISSHDVEIISQFAERVFVLNSGELIAEGTPLEI 224          
The following BLAST results are available for this feature:
BLAST of FC931267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CBIO1_BACSU2.353e-1426.52Cobalt import ATP-binding protein cbiO 1 OS=Bacill... [more]
Y2153_ENTFA3.073e-1431.65Putative ABC transporter ATP-binding protein EF_21... [more]
Y1037_METMA3.073e-1428.95Putative ABC transporter ATP-binding protein MM_10... [more]
METN_XANCP3.073e-1431.13Methionine import ATP-binding protein metN OS=Xant... [more]
METN_XANC83.073e-1431.13Methionine import ATP-binding protein metN OS=Xant... [more]
METN_XANAC3.073e-1431.13Methionine import ATP-binding protein metN OS=Xant... [more]
METN2_PSEU23.073e-1428.33Methionine import ATP-binding protein metN 2 OS=Ps... [more]
MCJD_ECOLX3.073e-1424.12Microcin-J25 export ATP-binding/permease protein m... [more]
CBIO_MOOTA3.073e-1428.30Cobalt import ATP-binding protein cbiO OS=Moorella... [more]
CBIO_METTH3.073e-1427.23Putative cobalt import ATP-binding protein cbiO OS... [more]

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Properties
Property NameValue
Genbank descriptionC34103C10EF PostHarvP1 Citrus clementina cDNA clone C34103C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931267 ID=FC931267; Name=FC931267; organism=Citrus clementina; type=EST; length=741bp
CATCAGAGGCTCCACTTGTTATTGAGAGTAACCGTCCCCCTCCTGGGTGG
CCTTCATCAGGATCTATAAAATTTGAGGATGTTGTCCTACGTTATAGGCC
TGAGCTTCCTCCAGTACTGCATGGATTGTCTTTTACAATTCCTCCAAGTG
ATAAAGTAGGAATAGTTGGAAGGACTGGTGCTGGGAAATCTAGCATGCTT
AATACATTATTTAGAATTGTAGAGCTAGAAAGAGGAAGAATCTTGATTGA
TGGTTTTGACATTGCTAAGTTTGGATTGATGGACCTGCGTAAAATACTCG
GTATTATACCACAATCACCAGTTCTTTTCTCAGGAACTGTAAGATTTAAT
CTTGATCCTTTCAGTGAACACAGTGATGCCGATCTTTGGGAGGCCTTAGA
GAGGGCACATTTGAAGGATGCCATACGCAGGAATTCTTTGGGTCTGGATG
CACAGGTCTCGGAGGCAGGGGAGAATTTTAGTGTTGGACAAAGGCAACTA
TTAAGTCTTTCTCGGGCGTTATTGCGGAGATCTAAGATACTTGTTCTTGA
TGAAGCAACTGCAGCTGTTGATGTTAGAACAGATGCACTTATTCAGAAAA
CCATAAGAGAAGAGTTTAAATCATGTACTATGCTTATTATAGCTCACCGT
CTTAATACCATCATTGACTGTGATCGGATTCTTCTGCTTGATTCTGGCCG
GGTTCTTTGATATGATACACCAGAGGAGCTGTTGTCCATGA
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