FC931267

Overview
NameFC931267
Unique NameFC931267
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length741
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: BPT1_YEAST (Bile pigment transporter 1 OS=Saccharomyces cerevisiae GN=BPT1 PE=1 SV=2)

HSP 1 Score: 227.254 bits (578), Expect = 6.986e-59
Identity = 123/262 (46.95%), Postives = 165/262 (62.98%), Query Frame = 3
Query:    6 EAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRR------------------NSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELLS 737
            EA  +    RP   WPS G I+F++   +YR  L PVL+ ++  I P +KVGIVGRTGAGKS++   LFRI+E   G+I+IDG DI+  GL DLR  L IIPQ    F GTV+ NLDPF+ +S+ +L  A+E+AHLK  + +                  N + LD +++E G N SVGQRQ            KILVLDEATA+VD+ TD +IQ TIR EFK  T+L IAHR++T++D D+I++LD G V  +D+P +LLS
Sbjct: 1282 EAQSINPEKRPDENWPSKGGIEFKNYSTKYRENLDPVLNNINVKIEPCEKVGIVGRTGAGKSTLSLALFRILEPTEGKIIIDGIDISDIGLFDLRSHLAIIPQDAQAFEGTVKTNLDPFNRYSEDELKRAVEQAHLKPHLEKMLHSKPRGDDSNEEDGNVNDI-LDVKINENGSNLSVGQRQLLCLARALLNRSKILVLDEATASVDMETDKIIQDTIRREFKDRTILTIAHRIDTVLDSDKIIVLDQGSVREFDSPSKLLS 1542          
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: YOR1_YEAST (Oligomycin resistance ATP-dependent permease YOR1 OS=Saccharomyces cerevisiae GN=YOR1 PE=1 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.556e-58
Identity = 124/251 (49.40%), Postives = 157/251 (62.55%), Query Frame = 3
Query:   36 PPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALER--AHLKDAI---------------RRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELLS 737
            PP  WPS G I FE+V   YRP LP VL  L+  I   +K+GI GRTGAGKS++++ L+R+ EL  G+ILID  DI++ GL DLR+ L IIPQ PVLF GT+R NLDPF+E +D +LW+AL R  A  KD +               + +   LD  V E G NFS+G+RQ            KIL+LDEAT++VD  TD  IQ  I EEF  CT+L IAHRL TI++ DRIL+L+ G V  +DTP  L S
Sbjct: 1203 PPESWPSMGEIIFENVDFAYRPGLPIVLKNLNLNIKSGEKIGICGRTGAGKSTIMSALYRLNELTAGKILIDNVDISQLGLFDLRRKLAIIPQDPVLFRGTIRKNLDPFNERTDDELWDALVRGGAIAKDDLPEVKLQKPDENGTHGKMHKFHLDQAVEEEGSNFSLGERQLLALTRALVRQSKILILDEATSSVDYETDGKIQTRIVEEFGDCTILCIAHRLKTIVNYDRILVLEKGEVAEFDTPWTLFS 1453          
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: MRP7_MOUSE (Multidrug resistance-associated protein 7 OS=Mus musculus GN=Abcc10 PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.009e-57
Identity = 113/228 (49.56%), Postives = 155/228 (67.98%), Query Frame = 3
Query:   48 WPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEEL 731
            W + GS++F+DVVL YRP LP  L G++F + P +K+GIVGRTG+GKSS+   LFR++E   GR+L+D  D ++  L +LR  L +IPQ P LFSGT+R NLDP   H D  LW+ALE+ HL +       GLD ++ E G+N S+GQRQ            KIL +DEATA+VD +TD L+Q+TI + F + T+L IAHRLNTI++ DR+L+L +GRV+  D+P  L
Sbjct: 1249 WLTQGSVEFQDVVLVYRPGLPNALDGVTFRVEPGEKLGIVGRTGSGKSSLFLVLFRLLEPNAGRVLLDNVDTSQLELAELRSQLAVIPQEPFLFSGTIRENLDPQGLHEDRALWQALEQCHLSEVAVAMG-GLDGELGERGQNLSLGQRQLLCLARALLTDAKILCIDEATASVDQKTDQLLQQTICKRFANKTVLTIAHRLNTILNSDRVLVLQAGRVVELDSPSAL 1475          

HSP 2 Score: 67.3958 bits (163), Expect = 9.252e-11
Identity = 56/197 (28.43%), Postives = 88/197 (44.67%), Query Frame = 3
Query:  156 VGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLW-EALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVR-TDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELLSM 740
            VGIVG+ G GKSS+L  +   +    G + +           +L K  G+  Q P +   T+R N+  F +  DA L+ E LE   L D +     G   +V E G   S GQR              + +LD+  AAVD    + L+ + I       T L+  HR   +   D +LL+++G+++    P E+L +
Sbjct:  630 VGIVGKVGCGKSSLLAAITGELHRLCGWVAVS----------ELSKGFGLATQEPWIQCATIRDNI-LFGKTFDAQLYREVLEACALNDDLSILPAGDQTEVGEKGVTLSGGQRARIALARAVYQEKALYLLDDPLAAVDADVANHLLHRCILGVLSHTTRLLCTHRTEYLERADVVLLMEAGQLVRTGPPSEILPL 815          
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: YBT1_YEAST (ATP-dependent bile acid permease OS=Saccharomyces cerevisiae GN=YBT1 PE=1 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 4.238e-56
Identity = 117/254 (46.06%), Postives = 157/254 (61.81%), Query Frame = 3
Query:   36 PPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHL-------KDAIRRNS--------------LGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELL 734
            PPP WP  G I+  D+ LRY P LP V+  +SF++    K+GIVGRTGAGKS+++  LFR +E E G I ID  DI+   L  LR+ + IIPQ P LFSGT++ NLDP+ E SD  ++EAL+R +L       + A R  S              L L +++SE G N S GQRQ            KI++LDEATA++D  +DA IQ+TIR+EF+  T+L IAHRL ++ID D+IL++D+G V  YD P  LL
Sbjct: 1371 PPPQWPQDGKIEVNDLSLRYAPNLPRVIKNVSFSVDAQSKIGIVGRTGAGKSTIITALFRFLEPETGHIKIDNIDISGVDLQRLRRSITIIPQDPTLFSGTIKTNLDPYDEFSDRQIFEALKRVNLISEEQLQQGATRETSNEASSTNSENVNKFLDLSSEISEGGSNLSQGQRQLMCLARSLLRSPKIILLDEATASIDYSSDAKIQETIRKEFQGSTILTIAHRLRSVIDYDKILVMDAGEVKEYDHPYSLL 1624          
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: ABCC8_RAT (ATP-binding cassette transporter sub-family C member 8 OS=Rattus norvegicus GN=Abcc8 PE=1 SV=4)

HSP 1 Score: 213.772 bits (543), Expect = 7.993e-55
Identity = 110/233 (47.21%), Postives = 150/233 (64.38%), Query Frame = 3
Query:   39 PPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELLS 737
            P  WP  G I+ +++ +RY   L PVL  ++  I P  K+GI GRTG+GKSS     FR+V++  GRI+IDG DIAK  L  LR  L II Q PVLFSGT+RFNLDP  + SD+ LWEALE A LK  ++    GLDA ++E GENFS GQRQ             I ++DEATA++D+ T+ ++QK +   F   T++ IAHR++TI+  D +++L  G +L +D PE+LLS
Sbjct: 1336 PKNWPDQGKIQIQNLSVRYDSSLKPVLKHVNALISPGQKIGICGRTGSGKSSFSLAFFRMVDMFEGRIIIDGIDIAKLPLHTLRSRLSIILQDPVLFSGTIRFNLDPEKKCSDSTLWEALEIAQLKLVVKALPGGLDAIITEGGENFSQGQRQLFCLARAFVRKTSIFIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVHTILSADLVMVLKRGAILEFDKPEKLLS 1568          
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: ABCC1_DICDI (ABC transporter C family member 1 OS=Dictyostelium discoideum GN=abcC1 PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.044e-54
Identity = 104/229 (45.41%), Postives = 150/229 (65.50%), Query Frame = 3
Query:   48 WPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELL 734
            W + G I+F +V ++Y       L   +  I   D +GIVGRTGAGKS++ N LFR+VE  +G ILIDG DI+K GL +LR  LGI+PQ P +FSGT+R N+DPF++++D+++W ALE+  LK  I    L L+  + E G+  S GQ+Q            K++++DEAT+ +D  T  LI++TI   FK+CTML IAHRL+TIID  +I ++D G+++ YDTP  L+
Sbjct: 1110 WLTKGEIEFRNVEIKYGHSGESSLKNFTLKINQKDHIGIVGRTGAGKSTIGNGLFRMVECSKGSILIDGVDISKIGLHELRSSLGIVPQDPFIFSGTIRLNIDPFNKYTDSEIWVALEKVKLKSTISSMPLKLETMIEEGGDGLSFGQKQLLCLSRTILKNSKVVLMDEATSGIDYVTSDLIKQTINNCFKNCTMLTIAHRLDTIIDSTKIAVIDKGKLIEYDTPNNLI 1338          
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: ABCC8_CRICR (ATP-binding cassette transporter sub-family C member 8 OS=Cricetus cricetus GN=ABCC8 PE=1 SV=3)

HSP 1 Score: 213.001 bits (541), Expect = 1.363e-54
Identity = 110/233 (47.21%), Postives = 149/233 (63.95%), Query Frame = 3
Query:   39 PPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELLS 737
            P  WP  G I+ +++ +RY   L PVL  ++  I P  K+GI GRTG+GKSS     FR+V++  GRI+IDG DIAK  L  LR  L II Q PVLFSGT+RFNLDP  + SD+ LWEALE A LK  ++    GLDA ++E GENFS GQRQ             I ++DEATA++D+ T+ ++QK +   F   T++ IAHR++TI+  D +++L  G +L +D PE LLS
Sbjct: 1336 PKNWPDQGKIQIQNLSVRYDSSLKPVLKHVNTLISPGQKIGICGRTGSGKSSFSLAFFRMVDMFEGRIIIDGIDIAKLPLHTLRSRLSIILQDPVLFSGTIRFNLDPEKKCSDSTLWEALEIAQLKLVVKALPGGLDAIITEGGENFSQGQRQLFCLARAFVRKTSIFIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVHTILSADLVMVLKRGAILEFDKPETLLS 1568          
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: ABCC8_HUMAN (ATP-binding cassette transporter sub-family C member 8 OS=Homo sapiens GN=ABCC8 PE=1 SV=5)

HSP 1 Score: 210.305 bits (534), Expect = 8.838e-54
Identity = 109/233 (46.78%), Postives = 148/233 (63.52%), Query Frame = 3
Query:   39 PPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELLS 737
            P  WP  G I+ +++ +RY   L PVL  ++  I P  K+GI GRTG+GKSS     FR+V+   G I+IDG DIAK  L  LR  L II Q PVLFSGT+RFNLDP  + SD+ LWEALE A LK  ++    GLDA ++E GENFS GQRQ             I ++DEATA++D+ T+ ++QK +   F   T++ IAHR++TI+  D +++L  G +L +D PE+LLS
Sbjct: 1335 PKNWPDQGKIQIQNLSVRYDSSLKPVLKHVNALISPGQKIGICGRTGSGKSSFSLAFFRMVDTFEGHIIIDGIDIAKLPLHTLRSRLSIILQDPVLFSGTIRFNLDPERKCSDSTLWEALEIAQLKLVVKALPGGLDAIITEGGENFSQGQRQLFCLARAFVRKTSIFIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVHTILSADLVIVLKRGAILEFDKPEKLLS 1567          
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: MRP6_HUMAN (Multidrug resistance-associated protein 6 OS=Homo sapiens GN=ABCC6 PE=1 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 1.154e-53
Identity = 112/244 (45.90%), Postives = 149/244 (61.07%), Query Frame = 3
Query:    6 EAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELLS 737
            EAP  + +    P WP  G I+F D  LRYRPELP  + G+SF I   +KVGIVGRTGAGKSS+ + L R+ E   G I IDG  IA  GL  LR  + IIPQ P+LF G++R NLD   EHSD  +W ALE   LK  +      L  + ++ GE+ SVGQ+Q            +IL+LDEATAAVD  T+  +Q  +   F  CT+L+IAHRL +++DC R+L++D G+V    +P +LL+
Sbjct: 1245 EAPWRLPTCAAQPPWPQGGQIEFRDFGLRYRPELPLAVQGVSFKIHAGEKVGIVGRTGAGKSSLASGLLRLQEAAEGGIWIDGVPIAHVGLHTLRSRISIIPQDPILFPGSLRMNLDLLQEHSDEAIWAALETVQLKALVASLPGQLQYKCADRGEDLSVGQKQLLCLARALLRKTQILILDEATAAVDPGTELQMQAMLGSWFAQCTVLLIAHRLRSVMDCARVLVMDKGQVAESGSPAQLLA 1488          
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: VMR1_YEAST (ABC transporter ATP-binding protein/permease VMR1 OS=Saccharomyces cerevisiae GN=VMR1 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.969e-53
Identity = 109/246 (44.31%), Postives = 155/246 (63.01%), Query Frame = 3
Query:   42 PGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAH----------LKDAIRRNS-----LGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELL 734
            P WP  G I+ E++ LRY P LPPV+  +SF + P  K+GIVGRTGAGKS+++  LFR++E   G I IDG DI+K  L+ LR+ + IIPQ P+LF+GT++ N+DP+ E+ +  +++AL + +          L    R NS     L L  +++E G N S G+RQ            KI++LDEAT+++D  +D LIQ  IR EF   T+L IAHRL ++ID DRI+++D+G V  YD P ELL
Sbjct: 1315 PSWPKDGEIEIENLSLRYAPNLPPVIRNVSFKVDPQSKIGIVGRTGAGKSTIITALFRLLEPITGCIKIDGQDISKIDLVTLRRSITIIPQDPILFAGTIKSNVDPYDEYDEKKIFKALSQVNLISSHEFEEVLNSEERFNSTHNKFLNLHTEIAEGGLNLSQGERQLLFIARSLLREPKIILLDEATSSIDYDSDHLIQGIIRSEFNKSTILTIAHRLRSVIDYDRIIVMDAGEVKEYDRPSELL 1560          
The following BLAST results are available for this feature:
BLAST of FC931267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BPT1_YEAST6.986e-5946.95Bile pigment transporter 1 OS=Saccharomyces cerevi... [more]
YOR1_YEAST1.556e-5849.40Oligomycin resistance ATP-dependent permease YOR1 ... [more]
MRP7_MOUSE1.009e-5749.56Multidrug resistance-associated protein 7 OS=Mus m... [more]
YBT1_YEAST4.238e-5646.06ATP-dependent bile acid permease OS=Saccharomyces ... [more]
ABCC8_RAT7.993e-5547.21ATP-binding cassette transporter sub-family C memb... [more]
ABCC1_DICDI1.044e-5445.41ABC transporter C family member 1 OS=Dictyostelium... [more]
ABCC8_CRICR1.363e-5447.21ATP-binding cassette transporter sub-family C memb... [more]
ABCC8_HUMAN8.838e-5446.78ATP-binding cassette transporter sub-family C memb... [more]
MRP6_HUMAN1.154e-5345.90Multidrug resistance-associated protein 6 OS=Homo ... [more]
VMR1_YEAST1.969e-5344.31ABC transporter ATP-binding protein/permease VMR1 ... [more]

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Properties
Property NameValue
Genbank descriptionC34103C10EF PostHarvP1 Citrus clementina cDNA clone C34103C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931267 ID=FC931267; Name=FC931267; organism=Citrus clementina; type=EST; length=741bp
CATCAGAGGCTCCACTTGTTATTGAGAGTAACCGTCCCCCTCCTGGGTGG
CCTTCATCAGGATCTATAAAATTTGAGGATGTTGTCCTACGTTATAGGCC
TGAGCTTCCTCCAGTACTGCATGGATTGTCTTTTACAATTCCTCCAAGTG
ATAAAGTAGGAATAGTTGGAAGGACTGGTGCTGGGAAATCTAGCATGCTT
AATACATTATTTAGAATTGTAGAGCTAGAAAGAGGAAGAATCTTGATTGA
TGGTTTTGACATTGCTAAGTTTGGATTGATGGACCTGCGTAAAATACTCG
GTATTATACCACAATCACCAGTTCTTTTCTCAGGAACTGTAAGATTTAAT
CTTGATCCTTTCAGTGAACACAGTGATGCCGATCTTTGGGAGGCCTTAGA
GAGGGCACATTTGAAGGATGCCATACGCAGGAATTCTTTGGGTCTGGATG
CACAGGTCTCGGAGGCAGGGGAGAATTTTAGTGTTGGACAAAGGCAACTA
TTAAGTCTTTCTCGGGCGTTATTGCGGAGATCTAAGATACTTGTTCTTGA
TGAAGCAACTGCAGCTGTTGATGTTAGAACAGATGCACTTATTCAGAAAA
CCATAAGAGAAGAGTTTAAATCATGTACTATGCTTATTATAGCTCACCGT
CTTAATACCATCATTGACTGTGATCGGATTCTTCTGCTTGATTCTGGCCG
GGTTCTTTGATATGATACACCAGAGGAGCTGTTGTCCATGA
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