FC931267
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: BPT1_YEAST (Bile pigment transporter 1 OS=Saccharomyces cerevisiae GN=BPT1 PE=1 SV=2) HSP 1 Score: 227.254 bits (578), Expect = 6.986e-59 Identity = 123/262 (46.95%), Postives = 165/262 (62.98%), Query Frame = 3 Query: 6 EAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRR------------------NSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELLS 737 EA + RP WPS G I+F++ +YR L PVL+ ++ I P +KVGIVGRTGAGKS++ LFRI+E G+I+IDG DI+ GL DLR L IIPQ F GTV+ NLDPF+ +S+ +L A+E+AHLK + + N + LD +++E G N SVGQRQ KILVLDEATA+VD+ TD +IQ TIR EFK T+L IAHR++T++D D+I++LD G V +D+P +LLS Sbjct: 1282 EAQSINPEKRPDENWPSKGGIEFKNYSTKYRENLDPVLNNINVKIEPCEKVGIVGRTGAGKSTLSLALFRILEPTEGKIIIDGIDISDIGLFDLRSHLAIIPQDAQAFEGTVKTNLDPFNRYSEDELKRAVEQAHLKPHLEKMLHSKPRGDDSNEEDGNVNDI-LDVKINENGSNLSVGQRQLLCLARALLNRSKILVLDEATASVDMETDKIIQDTIRREFKDRTILTIAHRIDTVLDSDKIIVLDQGSVREFDSPSKLLS 1542
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: YOR1_YEAST (Oligomycin resistance ATP-dependent permease YOR1 OS=Saccharomyces cerevisiae GN=YOR1 PE=1 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 1.556e-58 Identity = 124/251 (49.40%), Postives = 157/251 (62.55%), Query Frame = 3 Query: 36 PPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALER--AHLKDAI---------------RRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELLS 737 PP WPS G I FE+V YRP LP VL L+ I +K+GI GRTGAGKS++++ L+R+ EL G+ILID DI++ GL DLR+ L IIPQ PVLF GT+R NLDPF+E +D +LW+AL R A KD + + + LD V E G NFS+G+RQ KIL+LDEAT++VD TD IQ I EEF CT+L IAHRL TI++ DRIL+L+ G V +DTP L S Sbjct: 1203 PPESWPSMGEIIFENVDFAYRPGLPIVLKNLNLNIKSGEKIGICGRTGAGKSTIMSALYRLNELTAGKILIDNVDISQLGLFDLRRKLAIIPQDPVLFRGTIRKNLDPFNERTDDELWDALVRGGAIAKDDLPEVKLQKPDENGTHGKMHKFHLDQAVEEEGSNFSLGERQLLALTRALVRQSKILILDEATSSVDYETDGKIQTRIVEEFGDCTILCIAHRLKTIVNYDRILVLEKGEVAEFDTPWTLFS 1453
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: MRP7_MOUSE (Multidrug resistance-associated protein 7 OS=Mus musculus GN=Abcc10 PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.009e-57 Identity = 113/228 (49.56%), Postives = 155/228 (67.98%), Query Frame = 3 Query: 48 WPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEEL 731 W + GS++F+DVVL YRP LP L G++F + P +K+GIVGRTG+GKSS+ LFR++E GR+L+D D ++ L +LR L +IPQ P LFSGT+R NLDP H D LW+ALE+ HL + GLD ++ E G+N S+GQRQ KIL +DEATA+VD +TD L+Q+TI + F + T+L IAHRLNTI++ DR+L+L +GRV+ D+P L Sbjct: 1249 WLTQGSVEFQDVVLVYRPGLPNALDGVTFRVEPGEKLGIVGRTGSGKSSLFLVLFRLLEPNAGRVLLDNVDTSQLELAELRSQLAVIPQEPFLFSGTIRENLDPQGLHEDRALWQALEQCHLSEVAVAMG-GLDGELGERGQNLSLGQRQLLCLARALLTDAKILCIDEATASVDQKTDQLLQQTICKRFANKTVLTIAHRLNTILNSDRVLVLQAGRVVELDSPSAL 1475 HSP 2 Score: 67.3958 bits (163), Expect = 9.252e-11 Identity = 56/197 (28.43%), Postives = 88/197 (44.67%), Query Frame = 3 Query: 156 VGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLW-EALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVR-TDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELLSM 740 VGIVG+ G GKSS+L + + G + + +L K G+ Q P + T+R N+ F + DA L+ E LE L D + G +V E G S GQR + +LD+ AAVD + L+ + I T L+ HR + D +LL+++G+++ P E+L + Sbjct: 630 VGIVGKVGCGKSSLLAAITGELHRLCGWVAVS----------ELSKGFGLATQEPWIQCATIRDNI-LFGKTFDAQLYREVLEACALNDDLSILPAGDQTEVGEKGVTLSGGQRARIALARAVYQEKALYLLDDPLAAVDADVANHLLHRCILGVLSHTTRLLCTHRTEYLERADVVLLMEAGQLVRTGPPSEILPL 815
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: YBT1_YEAST (ATP-dependent bile acid permease OS=Saccharomyces cerevisiae GN=YBT1 PE=1 SV=2) HSP 1 Score: 218.009 bits (554), Expect = 4.238e-56 Identity = 117/254 (46.06%), Postives = 157/254 (61.81%), Query Frame = 3 Query: 36 PPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHL-------KDAIRRNS--------------LGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELL 734 PPP WP G I+ D+ LRY P LP V+ +SF++ K+GIVGRTGAGKS+++ LFR +E E G I ID DI+ L LR+ + IIPQ P LFSGT++ NLDP+ E SD ++EAL+R +L + A R S L L +++SE G N S GQRQ KI++LDEATA++D +DA IQ+TIR+EF+ T+L IAHRL ++ID D+IL++D+G V YD P LL Sbjct: 1371 PPPQWPQDGKIEVNDLSLRYAPNLPRVIKNVSFSVDAQSKIGIVGRTGAGKSTIITALFRFLEPETGHIKIDNIDISGVDLQRLRRSITIIPQDPTLFSGTIKTNLDPYDEFSDRQIFEALKRVNLISEEQLQQGATRETSNEASSTNSENVNKFLDLSSEISEGGSNLSQGQRQLMCLARSLLRSPKIILLDEATASIDYSSDAKIQETIRKEFQGSTILTIAHRLRSVIDYDKILVMDAGEVKEYDHPYSLL 1624
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: ABCC8_RAT (ATP-binding cassette transporter sub-family C member 8 OS=Rattus norvegicus GN=Abcc8 PE=1 SV=4) HSP 1 Score: 213.772 bits (543), Expect = 7.993e-55 Identity = 110/233 (47.21%), Postives = 150/233 (64.38%), Query Frame = 3 Query: 39 PPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELLS 737 P WP G I+ +++ +RY L PVL ++ I P K+GI GRTG+GKSS FR+V++ GRI+IDG DIAK L LR L II Q PVLFSGT+RFNLDP + SD+ LWEALE A LK ++ GLDA ++E GENFS GQRQ I ++DEATA++D+ T+ ++QK + F T++ IAHR++TI+ D +++L G +L +D PE+LLS Sbjct: 1336 PKNWPDQGKIQIQNLSVRYDSSLKPVLKHVNALISPGQKIGICGRTGSGKSSFSLAFFRMVDMFEGRIIIDGIDIAKLPLHTLRSRLSIILQDPVLFSGTIRFNLDPEKKCSDSTLWEALEIAQLKLVVKALPGGLDAIITEGGENFSQGQRQLFCLARAFVRKTSIFIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVHTILSADLVMVLKRGAILEFDKPEKLLS 1568
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: ABCC1_DICDI (ABC transporter C family member 1 OS=Dictyostelium discoideum GN=abcC1 PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.044e-54 Identity = 104/229 (45.41%), Postives = 150/229 (65.50%), Query Frame = 3 Query: 48 WPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELL 734 W + G I+F +V ++Y L + I D +GIVGRTGAGKS++ N LFR+VE +G ILIDG DI+K GL +LR LGI+PQ P +FSGT+R N+DPF++++D+++W ALE+ LK I L L+ + E G+ S GQ+Q K++++DEAT+ +D T LI++TI FK+CTML IAHRL+TIID +I ++D G+++ YDTP L+ Sbjct: 1110 WLTKGEIEFRNVEIKYGHSGESSLKNFTLKINQKDHIGIVGRTGAGKSTIGNGLFRMVECSKGSILIDGVDISKIGLHELRSSLGIVPQDPFIFSGTIRLNIDPFNKYTDSEIWVALEKVKLKSTISSMPLKLETMIEEGGDGLSFGQKQLLCLSRTILKNSKVVLMDEATSGIDYVTSDLIKQTINNCFKNCTMLTIAHRLDTIIDSTKIAVIDKGKLIEYDTPNNLI 1338
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: ABCC8_CRICR (ATP-binding cassette transporter sub-family C member 8 OS=Cricetus cricetus GN=ABCC8 PE=1 SV=3) HSP 1 Score: 213.001 bits (541), Expect = 1.363e-54 Identity = 110/233 (47.21%), Postives = 149/233 (63.95%), Query Frame = 3 Query: 39 PPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELLS 737 P WP G I+ +++ +RY L PVL ++ I P K+GI GRTG+GKSS FR+V++ GRI+IDG DIAK L LR L II Q PVLFSGT+RFNLDP + SD+ LWEALE A LK ++ GLDA ++E GENFS GQRQ I ++DEATA++D+ T+ ++QK + F T++ IAHR++TI+ D +++L G +L +D PE LLS Sbjct: 1336 PKNWPDQGKIQIQNLSVRYDSSLKPVLKHVNTLISPGQKIGICGRTGSGKSSFSLAFFRMVDMFEGRIIIDGIDIAKLPLHTLRSRLSIILQDPVLFSGTIRFNLDPEKKCSDSTLWEALEIAQLKLVVKALPGGLDAIITEGGENFSQGQRQLFCLARAFVRKTSIFIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVHTILSADLVMVLKRGAILEFDKPETLLS 1568
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: ABCC8_HUMAN (ATP-binding cassette transporter sub-family C member 8 OS=Homo sapiens GN=ABCC8 PE=1 SV=5) HSP 1 Score: 210.305 bits (534), Expect = 8.838e-54 Identity = 109/233 (46.78%), Postives = 148/233 (63.52%), Query Frame = 3 Query: 39 PPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELLS 737 P WP G I+ +++ +RY L PVL ++ I P K+GI GRTG+GKSS FR+V+ G I+IDG DIAK L LR L II Q PVLFSGT+RFNLDP + SD+ LWEALE A LK ++ GLDA ++E GENFS GQRQ I ++DEATA++D+ T+ ++QK + F T++ IAHR++TI+ D +++L G +L +D PE+LLS Sbjct: 1335 PKNWPDQGKIQIQNLSVRYDSSLKPVLKHVNALISPGQKIGICGRTGSGKSSFSLAFFRMVDTFEGHIIIDGIDIAKLPLHTLRSRLSIILQDPVLFSGTIRFNLDPERKCSDSTLWEALEIAQLKLVVKALPGGLDAIITEGGENFSQGQRQLFCLARAFVRKTSIFIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVHTILSADLVIVLKRGAILEFDKPEKLLS 1567
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: MRP6_HUMAN (Multidrug resistance-associated protein 6 OS=Homo sapiens GN=ABCC6 PE=1 SV=2) HSP 1 Score: 209.92 bits (533), Expect = 1.154e-53 Identity = 112/244 (45.90%), Postives = 149/244 (61.07%), Query Frame = 3 Query: 6 EAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELLS 737 EAP + + P WP G I+F D LRYRPELP + G+SF I +KVGIVGRTGAGKSS+ + L R+ E G I IDG IA GL LR + IIPQ P+LF G++R NLD EHSD +W ALE LK + L + ++ GE+ SVGQ+Q +IL+LDEATAAVD T+ +Q + F CT+L+IAHRL +++DC R+L++D G+V +P +LL+ Sbjct: 1245 EAPWRLPTCAAQPPWPQGGQIEFRDFGLRYRPELPLAVQGVSFKIHAGEKVGIVGRTGAGKSSLASGLLRLQEAAEGGIWIDGVPIAHVGLHTLRSRISIIPQDPILFPGSLRMNLDLLQEHSDEAIWAALETVQLKALVASLPGQLQYKCADRGEDLSVGQKQLLCLARALLRKTQILILDEATAAVDPGTELQMQAMLGSWFAQCTVLLIAHRLRSVMDCARVLVMDKGQVAESGSPAQLLA 1488
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: VMR1_YEAST (ABC transporter ATP-binding protein/permease VMR1 OS=Saccharomyces cerevisiae GN=VMR1 PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.969e-53 Identity = 109/246 (44.31%), Postives = 155/246 (63.01%), Query Frame = 3 Query: 42 PGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAH----------LKDAIRRNS-----LGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELL 734 P WP G I+ E++ LRY P LPPV+ +SF + P K+GIVGRTGAGKS+++ LFR++E G I IDG DI+K L+ LR+ + IIPQ P+LF+GT++ N+DP+ E+ + +++AL + + L R NS L L +++E G N S G+RQ KI++LDEAT+++D +D LIQ IR EF T+L IAHRL ++ID DRI+++D+G V YD P ELL Sbjct: 1315 PSWPKDGEIEIENLSLRYAPNLPPVIRNVSFKVDPQSKIGIVGRTGAGKSTIITALFRLLEPITGCIKIDGQDISKIDLVTLRRSITIIPQDPILFAGTIKSNVDPYDEYDEKKIFKALSQVNLISSHEFEEVLNSEERFNSTHNKFLNLHTEIAEGGLNLSQGERQLLFIARSLLREPKIILLDEATSSIDYDSDHLIQGIIRSEFNKSTILTIAHRLRSVIDYDRIIVMDAGEVKEYDRPSELL 1560 The following BLAST results are available for this feature:
BLAST of FC931267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931267 ID=FC931267; Name=FC931267; organism=Citrus clementina; type=EST; length=741bpback to top |