FC931267
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: ABCC9_RABIT (ATP-binding cassette transporter sub-family C member 9 OS=Oryctolagus cuniculus GN=ABCC9 PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.571e-53 Identity = 109/239 (45.61%), Postives = 153/239 (64.02%), Query Frame = 3 Query: 21 IESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELLS 737 ++ ++ P WP G IK D+ +RY L PVL + I P KVGI GRTG+GKSS+ FR+V++ G+I+IDG DI+K L LR L II Q P+LFSG++RFNLDP + +D LWEALE A LK+ ++ S GLDA V+E GENFSVGQRQ IL++DEATA++D+ T+ ++QK + F T++ IAHR+++I+D D +L+ G ++ DT LL+ Sbjct: 1297 MDPSQVPEHWPQEGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLSGGLDAVVTEGGENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSSIVDADLVLVFSEGILVECDTGPNLLT 1535
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: ABCC9_MOUSE (ATP-binding cassette transporter sub-family C member 9 OS=Mus musculus GN=Abcc9 PE=1 SV=2) HSP 1 Score: 204.142 bits (518), Expect = 6.333e-52 Identity = 107/238 (44.96%), Postives = 150/238 (63.03%), Query Frame = 3 Query: 21 IESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELL 734 ++ ++ P WP G IK D+ +RY L PVL + I P KVGI GRTG+GKSS+ FR+V++ G+I+IDG DI+K L LR L II Q P+LFSG++RFNLDP + +D LWEALE A LK+ ++ GLDA V+E GENFSVGQRQ IL++DEATA++D+ T+ ++QK + F T++ IAHR+++I+D +L+ G ++ DT LL Sbjct: 1294 MDPSQVPEHWPQEGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDATVTEGGENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSSIVDAGLVLVFSEGILVECDTGPNLL 1531
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: ABCC9_RAT (ATP-binding cassette transporter sub-family C member 9 OS=Rattus norvegicus GN=Abcc9 PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.080e-51 Identity = 107/238 (44.96%), Postives = 150/238 (63.03%), Query Frame = 3 Query: 21 IESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELL 734 ++ ++ P WP G IK D+ +RY L PVL + I P KVGI GRTG+GKSS+ FR+V++ G+I+IDG DI+K L LR L II Q P+LFSG++RFNLDP + +D LWEALE A LK+ ++ GLDA V+E GENFSVGQRQ IL++DEATA++D+ T+ ++QK + F T++ IAHR+++I+D +L+ G ++ DT LL Sbjct: 1293 MDPSQVPEHWPQEGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDATVTEGGENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSSIMDAGLVLVFSEGILVECDTGPNLL 1530
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: ABCC9_HUMAN (ATP-binding cassette transporter sub-family C member 9 OS=Homo sapiens GN=ABCC9 PE=1 SV=2) HSP 1 Score: 203.371 bits (516), Expect = 1.080e-51 Identity = 107/239 (44.77%), Postives = 151/239 (63.18%), Query Frame = 3 Query: 21 IESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELLS 737 ++ ++ P WP G IK D+ +RY L PVL + I P KVGI GRTG+GKSS+ FR+V++ G+I+IDG DI+K L LR L II Q P+LFSG++RFNLDP + +D LWEALE A LK+ ++ GLDA V+E GENFSVGQRQ IL++DEATA++D+ T+ ++QK + F T++ IAHR+++I+D +L+ G ++ DT LL+ Sbjct: 1297 MDPSQVPEHWPQEGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSSIMDAGLVLVFSEGILVECDTVPNLLA 1535
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: ABCCF_DICDI (ABC transporter C family member 15 OS=Dictyostelium discoideum GN=abcC15 PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 7.002e-51 Identity = 95/229 (41.48%), Postives = 149/229 (65.07%), Query Frame = 3 Query: 48 WPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELL 734 WPS G I+F++V +RYRP L S I +++GI+GR+G+GKS++ +LFR++E G ILIDG DI++ L LR +GI+PQ P +FSG++R NLDPF + +D ++WEAL + LK + + L++ V + G+ ++G +Q KI++ DEAT ++D +T LI++TI E FK CT+L IAH ++TI+D D+I ++D G ++ +DTP L+ Sbjct: 1187 WPSRGEIEFKNVEIRYRPNSIATLRNFSMKINAQERIGIIGRSGSGKSTIGMSLFRMIECSSGSILIDGDDISQIDLKRLRSSIGIVPQDPFIFSGSIRLNLDPFDQFTDNEIWEALSKVKLKKMVSTMPMKLESLV-QGGDGLTIGNKQLLCLCRAILRNSKIVLFDEATNSIDFQTTRLIKQTIEENFKDCTILTIAHNIDTILDSDKIAIIDEGELIEFDTPLNLI 1414
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: MRP6_RAT (Multidrug resistance-associated protein 6 OS=Rattus norvegicus GN=Abcc6 PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 7.742e-50 Identity = 107/244 (43.85%), Postives = 146/244 (59.84%), Query Frame = 3 Query: 6 EAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELLS 737 EAP + S+ P WP G I+F D LR+RPELP + G+S I +KVGIVGRTGAGKSS+ L R+ E G I IDG I GL LR + IIPQ PVLF G++R NLD E++D +W ALE LK + L + S G++ SVGQ+Q +IL+LDEATA+VD T+ +Q + F CT+L+IAHRL ++++C R+L++D G+V +P +LL+ Sbjct: 1244 EAPWRLPSSAAQPLWPCGGQIEFRDFGLRHRPELPMAVQGVSLKIHAGEKVGIVGRTGAGKSSLTWGLLRLQEATEGGIWIDGVPITDMGLHTLRSRITIIPQDPVLFPGSLRMNLDLLQENTDEGIWAALETVQLKAFVTSLPGQLQYECSGQGDDLSVGQKQLLCLARALLRKTQILILDEATASVDPGTEIQMQAALERWFAQCTVLLIAHRLRSVMNCARVLVMDEGQVAESGSPAQLLA 1487 HSP 2 Score: 73.559 bits (179), Expect = 1.291e-12 Identity = 58/235 (24.68%), Postives = 99/235 (42.13%), Query Frame = 3 Query: 39 PPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTI---REEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELL 734 P S I + + E PP LHG++ T+P + +VG GAGKSS+L+ L + G + I+G + +PQ + + +V N+ E L E LE L + G+ V E G N S GQ+Q + ++D+ AA+D + K + + T +++ H L+ + D+IL+L +G + + ++LL Sbjct: 618 PSRCSSKDRISIHNGTFAWSQESPPCLHGINLTVPQGCLLAVVGPVGAGKSSLLSALLGELLKVEGSVSIEG-------------SVAYVPQEAWVQNTSVVENVCFRQELDLPWLQEVLEACALGSDVASFPAGVHTPVGEQGMNLSGGQKQRLSLARAVYRRAAVYLMDDPLAALDAHVSQEVFKQVIGPSGLLQGTTRILVTHTLHVLPQADQILVLANGTIAEMGSYQDLL 839
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: AB13C_ARATH (ABC transporter C family member 13 OS=Arabidopsis thaliana GN=ABCC13 PE=2 SV=2) HSP 1 Score: 197.208 bits (500), Expect = 7.742e-50 Identity = 103/229 (44.98%), Postives = 143/229 (62.45%), Query Frame = 3 Query: 48 WPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELL 734 WP G ++F +V +RY LPP L +SFTI VG++GRTGAGKSS+LN LFR+ + G IL+DG +I+ + +LR L ++PQSP LF G++R NLDP D +WE L++ +K A+ GLD+ V E+G +FSVGQRQ KIL LDE TA +DV T +L+ TI E K T++ IAHR++T++D D IL+LD G ++ P+ LL Sbjct: 952 WPVHGLVEFHNVTMRYISTLPPALTQISFTIQGGMHVGVIGRTGAGKSSILNALFRLTPVCSGEILVDGKNISHLPIRELRSCLAVVPQSPFLFQGSLRDNLDPLGLSEDWRIWEILDKCKVKAAVESVG-GLDSYVKESGCSFSVGQRQLLCLARALLKSSKILCLDECTANIDVHTASLLHNTISSECKGVTVITIAHRISTVVDLDSILILDRGILVEQGKPQHLL 1179
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: MRP6_MOUSE (Multidrug resistance-associated protein 6 OS=Mus musculus GN=Abcc6 PE=1 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.725e-49 Identity = 106/244 (43.44%), Postives = 143/244 (58.61%), Query Frame = 3 Query: 6 EAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELLS 737 EAP + + P WP G I+F D LR+RPELP + G+S I +KVGIVGRTGAGKSS+ L R+ E G I IDG I GL LR + IIPQ PVLF G++R NLD EH+D +W ALE LK + L + + G++ SVG +Q +IL+LDEATA+VD T+ +Q + F CT+L+IAHRL +++DC R+L++D G+V P +LL+ Sbjct: 1240 EAPWRLPTCAAQPLWPCGGQIEFRDFGLRHRPELPLAVQGVSLKIHAGEKVGIVGRTGAGKSSLAWGLLRLQEAAEGNIWIDGVPITHVGLHTLRSRITIIPQDPVLFPGSLRMNLDLLQEHTDEGIWAALETVQLKAFVTSLPGQLQYECAGQGDDLSVGHKQLLCLARALLRKTQILILDEATASVDPGTEMQMQAALERWFTQCTLLLIAHRLRSVMDCARVLVMDEGQVAESGNPAQLLA 1483 HSP 2 Score: 73.559 bits (179), Expect = 1.291e-12 Identity = 57/230 (24.78%), Postives = 98/230 (42.61%), Query Frame = 3 Query: 54 SSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTI---REEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELL 734 S I + + E PP LHG++ T+P + +VG GAGKSS+L+ L + G + I+G + +PQ + + +V N+ E L + L+ L + G+ + E G N S GQ+Q I +LD+ AA+D + K + + T +++ H L+ + DRIL+L +G + + ++LL Sbjct: 623 SKDRISVHNGTFAWSQESPPCLHGINLTVPQGCLLAVVGPVGAGKSSLLSALLGELLKVEGSVSIEG-------------SVAYVPQEAWVQNTSVAENVCFRQELDLPWLQKVLDACALGSDVASFPAGVHTPIGEQGMNLSGGQKQRLSLARAVYKKAAIYLLDDPLAALDAHVSQQVFKQVIGPSGLLQGTTRILVTHTLHVLPQADRILVLANGTIAEMGSYQDLL 839
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: MDR_LEITA (Multidrug resistance protein OS=Leishmania tarentolae GN=PGPA PE=3 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 1.460e-48 Identity = 102/227 (44.93%), Postives = 147/227 (64.76%), Query Frame = 3 Query: 57 SGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXK-ILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELL 734 +GS+ E V +RYR LP VL G+SF I P +KVGIVGRTG+GKS++L T R+VE+ G I ++G +++ +GL D+R+ +IPQ PVLF GTVR N+DPF E S A++W ALE L++ + S G+D++V E G N+SVGQRQ +++DEATA +D D IQ T+ F + T++ IAHRL+T+ D+I+++D G V +P EL+ Sbjct: 1283 AGSLVLEGVQMRYREGLPLVLRGVSFQIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGVIHVNGREMSAYGLRDVRRHFSMIPQDPVLFDGTVRQNVDPFLEASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKRGSGFILMDEATANIDPALDRQIQATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGVVAEMGSPRELV 1509 HSP 2 Score: 71.2478 bits (173), Expect = 6.407e-12 Identity = 46/199 (23.12%), Postives = 89/199 (44.72%), Query Frame = 3 Query: 114 VLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRT-DALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL 707 +L +S TIP ++G TG+GKS++L L +E G + + + + +PQ + + T+R N+ F E DL + + L+ + + GLD ++ E G N S GQ+ + +LD+ +A+D ++Q I + T ++ H+++ + D I++L G ++ Sbjct: 649 LLRNVSLTIPKGKLTMVIGSTGSGKSTLLGALMGEYSVESGELWAE-------------RSIAYVPQQAWIMNATLRGNILFFDEERAEDLQDVIRCCQLEADLAQFCGGLDTEIGEMGVNLSGGQKARVSLARAVYANRDVYLLDDPLSALDAHVGQRIVQDVILGRLRGKTRVLATHQIHLLPLADYIVVLQHGSIV 834
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: ABCC7_DICDI (ABC transporter C family member 7 OS=Dictyostelium discoideum GN=abcC7 PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 5.548e-48 Identity = 96/229 (41.92%), Postives = 146/229 (63.76%), Query Frame = 3 Query: 21 IESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL 707 +ESN P WP G I+F++V ++YRP L P L +SF I ++K+GIVG++G+GKS+ + LFR++E +G I IDG DI+K L LR +GI PQ P +FSGT+R N+DPF +SD+++W ALE+ LK+ I + +D + E N S GQ+Q K++ DE ++++D T + +++E + T L IAHR++TIID DRIL++DSG ++ Sbjct: 1069 LESNLPI-NWPQKGEIQFKNVEIKYRPNLKPSLKNISFDIKSNEKIGIVGKSGSGKSTTMLALFRMIECSKGSIHIDGIDISKISLSKLRNSIGICPQEPFIFSGTIRKNIDPFGIYSDSEIWLALEKVKLKETISLLPMKIDTIIHEQA-NLSFGQKQLLCLTRVLLKSPKLVFFDEHSSSIDYFTAHQLNISVKENITNSTTLTIAHRIDTIIDSDRILVIDSGELI 1295 The following BLAST results are available for this feature:
BLAST of FC931267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931267 ID=FC931267; Name=FC931267; organism=Citrus clementina; type=EST; length=741bpback to top |