FC931267
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: ABCC9_DICDI (ABC transporter C family member 9 OS=Dictyostelium discoideum GN=abcC9 PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.108e-47 Identity = 95/231 (41.13%), Postives = 145/231 (62.77%), Query Frame = 3 Query: 48 WPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGE-NFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELLS 737 WP G+I+F +V + Y P L ++F++ ++K+GIVGRTGAGKS++ N LFR+VE +G ILIDG DI L LR LGI+PQ P LFSGT+R N+DP +++ D +W LE LK I L L++++ E G S GQ+Q K++++DEAT++VD +T I+ I E + T+L IAHRL+ IID D+I ++D+ +++ ++ P+ L++ Sbjct: 1097 WPEKGNIQFNNVQVNYNSNSVPSLKDITFSVESNEKIGIVGRTGAGKSTIANCLFRLVECSKGSILIDGIDIKTIDLNKLRGSLGIVPQEPWLFSGTIRSNIDPLNQYDDEMIWNYLEMVKLKKLIIEMPLKLNSKIHENGNTTLSYGQKQLLCLCRCLIKNPKLIIMDEATSSVDFQTAETIKSVINENLVNNTILTIAHRLDIIIDSDKIAVIDNSKLIEFENPKNLIN 1327
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: NFT1_YEAST (ABC transporter NFT1 OS=Saccharomyces cerevisiae GN=NFT1 PE=1 SV=2) HSP 1 Score: 188.734 bits (478), Expect = 2.754e-47 Identity = 103/253 (40.71%), Postives = 140/253 (55.34%), Query Frame = 3 Query: 36 PPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHL-------------------KDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELLS 737 PP WP +G ++ +++ LRY P L +SF + KVGIVGRTGAGKSS++ ++R+ + E G I ID DI L LR + IPQ P LF GTVR NLDPF +SD ++ L + L +R + L+ V G N S GQRQ I+++DEATA++D +DA IQKTIRE K+ T+L IAHRL ++ID D+IL+++ GRV YD P L+S Sbjct: 1275 PPANWPQTGDVELKNLSLRYSPHSSKALDNVSFKVKAGTKVGIVGRTGAGKSSIIAAIYRLSDWENGTITIDNKDIKHIPLERLRNSISCIPQDPTLFDGTVRSNLDPFDRYSDVQIYGVLSKVGLIEECDELCLIFEQEQPNFSSHKLRNRFIDLNTVVKSGGSNLSQGQRQLLCLARSMLGARNIMLIDEATASIDYISDAKIQKTIRETMKNTTILTIAHRLRSVIDYDKILVMEMGRVKEYDHPYTLIS 1527
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: ABC1_SCHPO (ATP-binding cassette transporter abc1 OS=Schizosaccharomyces pombe GN=abc1 PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.671e-44 Identity = 100/236 (42.37%), Postives = 140/236 (59.32%), Query Frame = 3 Query: 48 WPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERA---HLKDAIRRNSLG-----LDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEEL 731 WP+ G + +++ + Y VL ++ I P +K+ IVGRTG+GKS+M TL R + G + +DG DI L LR+ + +IPQ PVL SGTVR NLDPF E+ D +L E L+ A L A +NSL LD V G NFS GQRQ +I++LDE+TA+VD TD IQ+ +R FK T+L IAHR+ TI+D D++L+LDSG+ + + +P+ L Sbjct: 1174 WPTLGHVSIKNLTVSYSIGQAAVLEDINLEILPKEKIAIVGRTGSGKSTMGLTLLRFTMIMSGAVEVDGIDINSLDLEVLRQRISLIPQDPVLISGTVRSNLDPFEEYGDGELNEILKTASCESLVQASNKNSLDAFAIHLDTPVDSGGVNFSSGQRQILALARALVRKSRIVILDESTASVDDTTDRRIQQMLRAAFKHATVLCIAHRIKTIVDYDKVLVLDSGKTVEFGSPKSL 1409
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: ABC4_SCHPO (ATP-binding cassette transporter abc4 OS=Schizosaccharomyces pombe GN=abc4 PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.414e-43 Identity = 102/249 (40.96%), Postives = 137/249 (55.02%), Query Frame = 3 Query: 6 EAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNS-------LGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEEL 731 + P + + P WP G I F V + Y P +L ++ I PS+KV +VGRTG+GKS++ TL R G I I+G + L LR+ + IPQ P+LFSGTVR NLDPF E D L EAL+ + I ++ + LD V+ G NFS GQ+Q KI++LDE TA+VD D IQKT+RE F TML IAHRL TI+D D++++LD G ++ Y P L Sbjct: 1192 QEPAPTIAGQVPATWPKEGDIVFNHVSVSYSAAGPTILKDVNLHINPSEKVAVVGRTGSGKSTLGLTLLRFTHRISGEIYINGRETQSVNLNALRQRISFIPQDPILFSGTVRSNLDPFDELEDNFLNEALKTSGASSMIMAHTDDQKPIHITLDTHVASEGSNFSQGQKQVLALARAIVRRSKIIILDECTASVDDAMDQKIQKTLREAFGDATMLCIAHRLKTIVDYDKVMVLDKGVLVEYGPPAVL 1440
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: EXP8_STRPN (Putative ABC transporter ATP-binding protein exp8 OS=Streptococcus pneumoniae GN=exp8 PE=3 SV=3) HSP 1 Score: 161.384 bits (407), Expect = 4.708e-39 Identity = 88/227 (38.77%), Postives = 133/227 (58.59%), Query Frame = 3 Query: 60 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELLSM 740 G+I+FE V Y + P+L +SF++ + + VG TG+GKSS++N L R E + GR+L+D DI F +LRK +G++ Q P L+ GT++ N+ + E SD + A I+ G D+ VSE G +FS GQRQ KIL+LDEATA +D T++L+Q ++ + + T + IAHRL+TI D + I +LD GR++ T EELL++ Sbjct: 339 GNIRFEHVCFSYDGK-HPILDDISFSVNKGETIAFVGHTGSGKSSIINVLMRFYEFQSGRVLLDDVDIRDFSQEELRKNIGLVLQEPFLYHGTIKSNIAMYQETSDEQVQAAAAFVDADSFIQELPQGYDSPVSERGSSFSTGQRQLLAFARTVASQPKILILDEATANIDSETESLVQASLAKMRQGRTTIAIAHRLSTIQDANCIYVLDKGRIIESGTHEELLAL 564
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: CFTR_OTOGA (Cystic fibrosis transmembrane conductance regulator OS=Otolemur garnettii GN=CFTR PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 8.030e-39 Identity = 82/230 (35.65%), Postives = 132/230 (57.39%), Query Frame = 3 Query: 48 WPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELLS 737 WPS G + +D+ RY +L +SF+I P +VG++GRTGAGKS++L+ R++ E G I IDG L RK G+IPQ +FSGT R NLDP+ + SD ++W+ + L+ I + LD + + G S G +Q KIL+LDE +A +D T +I++T+++ F CT+++ HR+ +++C R L+++ +V YD+ ++LLS Sbjct: 1206 WPSGGQMTVKDLTARYIDSGNAILENISFSISPGQRVGLLGRTGAGKSTLLSAFLRLLNTE-GDIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGYVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQIIRRTLKQAFADCTVILCEHRIEAMLECQRFLVIEENKVRQYDSIQKLLS 1434
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: CFTR_CERAE (Cystic fibrosis transmembrane conductance regulator OS=Cercopithecus aethiops GN=CFTR PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.049e-38 Identity = 80/230 (34.78%), Postives = 133/230 (57.83%), Query Frame = 3 Query: 48 WPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELLS 737 WPS G + +D+ +Y P+L +SF+I P +VG++GRTG+GKS++L+ R++ E G I IDG L RK G+IPQ +FSGT R NLDP+ + SD ++WE + L+ I + LD + + G S G +Q KIL+LDE +A +D T +I++T+++ F CT+++ HR+ +++C + L+++ +V YD+ ++LL+ Sbjct: 1205 WPSGGQMTVKDLTAKYTEGGNPILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTE-GEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWEVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLKQAFADCTVILCEHRIEAMLECQQFLVIEENKVRQYDSIQKLLN 1433
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: CFTR_MICMU (Cystic fibrosis transmembrane conductance regulator OS=Microcebus murinus GN=CFTR PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.336e-38 Identity = 81/230 (35.22%), Postives = 131/230 (56.96%), Query Frame = 3 Query: 48 WPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELLS 737 WPS G + +D+ RY +L +SF+I P +VG++GRTG+GKS++L+ R++ E G I IDG L RK G+IPQ +FSGT R NLDP+ + SD ++W+ + L+ I + LD + + G S G +Q KIL+LDE +A +D T +I++T+++ F CT+++ HR+ +++C R L+++ V YD+ ++LLS Sbjct: 1205 WPSGGQMTVKDLTARYLDGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTE-GEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGYVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQIIRRTLKQAFADCTVILCEHRIEAMLECQRFLVIEENNVRQYDSIQKLLS 1433
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: CFTR_PAPAN (Cystic fibrosis transmembrane conductance regulator OS=Papio anubis GN=CFTR PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.052e-38 Identity = 79/230 (34.35%), Postives = 133/230 (57.83%), Query Frame = 3 Query: 48 WPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELLS 737 WPS G + +D+ +Y P+L +SF+I P +VG++GRTG+GKS++L+ R++ E G I IDG L RK G+IPQ +FSGT R NLDP+ + SD ++W+ + L+ I + LD + + G S G +Q KIL+LDE +A +D T +I++T+++ F CT+++ HR+ +++C + L+++ +V YD+ ++LL+ Sbjct: 1205 WPSGGQMTVKDLTAKYTEGGNPILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTE-GEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLKQAFADCTVILCEHRIEAMLECQQFLVIEENKVRQYDSIQKLLN 1433
BLAST of FC931267 vs. ExPASy Swiss-Prot
Match: CFTR_MACNE (Cystic fibrosis transmembrane conductance regulator OS=Macaca nemestrina GN=CFTR PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.052e-38 Identity = 79/230 (34.35%), Postives = 133/230 (57.83%), Query Frame = 3 Query: 48 WPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQXXXXXXXXXXXXKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL*YDTPEELLS 737 WPS G + +D+ +Y P+L +SF+I P +VG++GRTG+GKS++L+ R++ E G I IDG L RK G+IPQ +FSGT R NLDP+ + SD ++W+ + L+ I + LD + + G S G +Q KIL+LDE +A +D T +I++T+++ F CT+++ HR+ +++C + L+++ +V YD+ ++LL+ Sbjct: 1205 WPSGGQMTVKDLTAKYTEGGNPILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTE-GEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLKQAFADCTVILCEHRIEAMLECQQFLVIEENKVRQYDSIQKLLN 1433 The following BLAST results are available for this feature:
BLAST of FC931267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931267 ID=FC931267; Name=FC931267; organism=Citrus clementina; type=EST; length=741bpback to top |