FC931271

Overview
NameFC931271
Unique NameFC931271
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK5_POPTR (S-adenosylmethionine synthetase 5 OS=Populus trichocarpa GN=METK5 PE=2 SV=1)

HSP 1 Score: 415.231 bits (1066), Expect = 1.679e-115
Identity = 203/228 (89.04%), Postives = 212/228 (92.98%), Query Frame = 2 
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            ++LTEVRKNGTC WLRPDGKTQVTVEYYNENGA VP+RVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEIL+IVKE+FDFRPGMISINLDLKRGGN RFLKTAAYGHFGRDDPD
Sbjct:  151 ARLTEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILQIVKESFDFRPGMISINLDLKRGGNSRFLKTAAYGHFGRDDPD 378
[Close]
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK1_SOLTU (S-adenosylmethionine synthetase 1 OS=Solanum tuberosum GN=METK1 PE=2 SV=1)

HSP 1 Score: 414.846 bits (1065), Expect = 2.193e-115
Identity = 201/228 (88.16%), Postives = 212/228 (92.98%), Query Frame = 2 
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            ++LTEVRKNGTCPWLRPDGKTQVTVEY N+NGA +P++VHTVLISTQHDETVTNDEIA DLK+HVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKENFDFRPGM+SINLDLKRGGNGRFLKTAAYGHFGRDDPD
Sbjct:  150 ARLTEVRKNGTCPWLRPDGKTQVTVEYCNDNGAMIPIKVHTVLISTQHDETVTNDEIARDLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMMSINLDLKRGGNGRFLKTAAYGHFGRDDPD 377
[Close]
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK3_PETHY (S-adenosylmethionine synthetase 3 OS=Petunia hybrida GN=SAM3 PE=2 SV=1)

HSP 1 Score: 414.075 bits (1063), Expect = 3.740e-115
Identity = 202/228 (88.60%), Postives = 211/228 (92.54%), Query Frame = 2 
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            ++LTEVRKNGTCPWLRPDGKTQVTVEYYNENGA VPVRVHTVLISTQHDETVTNDEIA DLK+HVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKS+VA+GLARRCIVQVSYAIGVPEPLSVFVD+YGTG IPDKEILKIVKENFDFRPGMI+INLDLKRGGNGRFLKTAAYGHFGRDD D
Sbjct:  150 ARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAHDLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGMIPDKEILKIVKENFDFRPGMIAINLDLKRGGNGRFLKTAAYGHFGRDDTD 377
[Close]
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK2_POPTR (S-adenosylmethionine synthetase 2 OS=Populus trichocarpa GN=METK2 PE=2 SV=1)

HSP 1 Score: 413.69 bits (1062), Expect = 4.885e-115
Identity = 202/228 (88.60%), Postives = 211/228 (92.54%), Query Frame = 2 
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            ++LTEVRKNGTCPWLRPDGKTQVTVEY NENGA VP+RVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEIL IVKE FDFRPGMI+I+LDLKRGGNGRFLKTAAYGHFGRDDPD
Sbjct:  150 ARLTEVRKNGTCPWLRPDGKTQVTVEYLNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILNIVKEKFDFRPGMIAISLDLKRGGNGRFLKTAAYGHFGRDDPD 377
[Close]
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK2_ELAUM (S-adenosylmethionine synthetase 2 OS=Elaeagnus umbellata GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 413.69 bits (1062), Expect = 4.885e-115
Identity = 201/228 (88.16%), Postives = 212/228 (92.98%), Query Frame = 2 
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            ++LTEVRK+GTCPWLRPDGKTQVTVEYYN+ GA VPVRVHTVLISTQHDETVTNDEIAADLK+HVIKPV+P+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVP+PLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMI+INLDLKRGGN RFLKTAAYGHFGRDDPD
Sbjct:  150 ARLTEVRKDGTCPWLRPDGKTQVTVEYYNDKGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVVPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMITINLDLKRGGNDRFLKTAAYGHFGRDDPD 377
[Close]
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK_MEDTR (S-adenosylmethionine synthetase OS=Medicago truncatula GN=METK PE=3 SV=1)

HSP 1 Score: 412.92 bits (1060), Expect = 8.332e-115
Identity = 200/228 (87.72%), Postives = 212/228 (92.98%), Query Frame = 2 
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            S+LTEVRKNGTC WLRPDGKTQVT+EYYNENGA VPVRVHTVLISTQHDETV+ND+IAADLK+HVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAY+VRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPD+EIL+IVKENFDFRPGMI+INLDLKRGGN RFLKTAAYGHFGRDDPD
Sbjct:  151 SRLTEVRKNGTCAWLRPDGKTQVTIEYYNENGAMVPVRVHTVLISTQHDETVSNDQIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDREILQIVKENFDFRPGMITINLDLKRGGNSRFLKTAAYGHFGRDDPD 378
[Close]
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK1_POPTR (S-adenosylmethionine synthetase 1 OS=Populus trichocarpa GN=METK1 PE=2 SV=1)

HSP 1 Score: 412.92 bits (1060), Expect = 8.332e-115
Identity = 203/228 (89.04%), Postives = 213/228 (93.42%), Query Frame = 2 
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            ++LTEVRKNGTCPWLRPDGKTQVTVEYYN+NGA VPVRVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKENFDFRPGM++INLDLKRGGN RFLKTAAYGHFGRDDPD
Sbjct:  150 ARLTEVRKNGTCPWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMMTINLDLKRGGN-RFLKTAAYGHFGRDDPD 376
[Close]
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK_POPDE (S-adenosylmethionine synthetase OS=Populus deltoides GN=METK PE=2 SV=1)

HSP 1 Score: 412.535 bits (1059), Expect = 1.088e-114
Identity = 202/228 (88.60%), Postives = 211/228 (92.54%), Query Frame = 2 
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            ++LTEVRKNGTC WLRPDGKTQVTVEYYNENGA VPVRVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHG++GLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEIL+IVKE FDFRPGMISINLDLKRGGN RFLKTAAYGHFGRDDPD
Sbjct:  151 ARLTEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGESGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILQIVKERFDFRPGMISINLDLKRGGNSRFLKTAAYGHFGRDDPD 378
[Close]
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK4_VITVI (S-adenosylmethionine synthetase 4 OS=Vitis vinifera GN=METK4 PE=3 SV=1)

HSP 1 Score: 411.764 bits (1057), Expect = 1.856e-114
Identity = 198/228 (86.84%), Postives = 213/228 (93.42%), Query Frame = 2 
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            ++LTEVRKNGTCPWLRPDGKTQVTVEY+N++GA VP+RVHTVLISTQHDETVTNDEIAADLK+HVIKP++P+K+LD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVD+Y TGKIPDKEILKIVKE+FDFRPGMI+INLDLKRGGNGRFLKTAAYGHFGRDDPD
Sbjct:  150 ARLTEVRKNGTCPWLRPDGKTQVTVEYFNDHGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPIVPEKFLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYATGKIPDKEILKIVKESFDFRPGMIAINLDLKRGGNGRFLKTAAYGHFGRDDPD 377
[Close]
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK_MEDFA (S-adenosylmethionine synthetase OS=Medicago falcata GN=SAMS PE=2 SV=1)

HSP 1 Score: 411.379 bits (1056), Expect = 2.424e-114
Identity = 201/228 (88.16%), Postives = 209/228 (91.67%), Query Frame = 2 
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            +KLTEVRKNGTCPWLRPDGKTQVT+EY+N+ GA VP+RVHTVLISTQHDETVTNDEIAADLKQHVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEIL IVKE FDFRPGMISINLDLKRGGN RFLKTAAYGHFGRDD D
Sbjct:  152 AKLTEVRKNGTCPWLRPDGKTQVTIEYFNDKGAMVPIRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILNIVKETFDFRPGMISINLDLKRGGNNRFLKTAAYGHFGRDDAD 379
The following BLAST results are available for this feature:
BLAST of FC931271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK5_POPTR1.679e-11589.04S-adenosylmethionine synthetase 5 OS=Populus trich... [more]
METK1_SOLTU2.193e-11588.16S-adenosylmethionine synthetase 1 OS=Solanum tuber... [more]
METK3_PETHY3.740e-11588.60S-adenosylmethionine synthetase 3 OS=Petunia hybri... [more]
METK2_POPTR4.885e-11588.60S-adenosylmethionine synthetase 2 OS=Populus trich... [more]
METK2_ELAUM4.885e-11588.16S-adenosylmethionine synthetase 2 OS=Elaeagnus umb... [more]
METK_MEDTR8.332e-11587.72S-adenosylmethionine synthetase OS=Medicago trunca... [more]
METK1_POPTR8.332e-11589.04S-adenosylmethionine synthetase 1 OS=Populus trich... [more]
METK_POPDE1.088e-11488.60S-adenosylmethionine synthetase OS=Populus deltoid... [more]
METK4_VITVI1.856e-11486.84S-adenosylmethionine synthetase 4 OS=Vitis vinifer... [more]
METK_MEDFA2.424e-11488.16S-adenosylmethionine synthetase OS=Medicago falcat... [more]

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Properties
Property NameValue
Genbank descriptionC34103D02EF PostHarvP1 Citrus clementina cDNA clone C34103D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931271 ID=FC931271; Name=FC931271; organism=Citrus clementina; type=EST; length=706bp
CATGTGCTTGCAACAAGCTTGGTCTAAGCTTACAGAAGTGAGGAAGAATG
GGACCTGTCCATGGCTGAGGCCAGATGGCAAAACACAAGTCACTGTTGAG
TATTACAATGAGAATGGCGCCAGGGTTCCTGTTCGTGTCCATACTGTGCT
TATCTCAACTCAGCACGATGAGACTGTAACTAATGATGAGATTGCTGCAG
ATCTCAAGCAACATGTGATCAAGCCCGTGATTCCTGACAAGTACTTGGAT
GACAAAACTATTTTCCATCTTAACCCATCTGGCCGTTTTGTTATTGGTGG
CCCTCACGGTGATGCTGGGCTCACTGGCCGGAAGATTATTATTGATACTT
ATGGTGGCTGGGGGGCACACGGCGGTGGGGCTTTCTCAGGGAAAGATCCT
ACCAAGGTTGATAGAAGCGGTGCTTACATTGTACGGCAAGCTGCTAAGAG
TATTGTGGCAAGTGGGCTTGCCAGGAGATGCATTGTTCAGGTTTCTTACG
CTATTGGTGTGCCCGAGCCTTTGTCAGTTTTTGTTGATAGTTATGGGACT
GGGAAGATCCCTGACAAGGAAATTTTGAAGATTGTGAAGGAGAATTTTGA
TTTTAGGCCTGGGATGATTTCTATTAATCTTGATCTCAAGAGGGGTGGCA
ACGGCAGGTTCTTGAAGACTGCCGCTTATGGGCACTTTGGCAGAGATGAT
CCTGAT
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