FC931271

Overview
NameFC931271
Unique NameFC931271
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15265 contig Ccv1_Contig15265:627..1332. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK3_ORYSJ (S-adenosylmethionine synthetase 3 OS=Oryza sativa subsp. japonica GN=METK3 PE=2 SV=1)

HSP 1 Score: 397.897 bits (1021), Expect = 2.774e-110
Identity = 193/228 (84.65%), Postives = 207/228 (90.79%), Query Frame = 2
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            ++LTEVRKNG C WLRPDGKTQVTVEY N+NGA VP+RVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP++YLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYI RQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPD+EIL+IV ENFDFRPGMI INLDL RGGNGR+LKTAAYGHFGR+DPD
Sbjct:  153 ARLTEVRKNGACAWLRPDGKTQVTVEYQNDNGAMVPLRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEQYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDREILRIVTENFDFRPGMIIINLDLMRGGNGRYLKTAAYGHFGREDPD 380          
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK3_PICSI (S-adenosylmethionine synthetase 3 OS=Picea sitchensis GN=METK3 PE=2 SV=1)

HSP 1 Score: 397.512 bits (1020), Expect = 3.623e-110
Identity = 193/228 (84.65%), Postives = 206/228 (90.35%), Query Frame = 2
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            +KLTEVRKNGTC WLRPDGKTQVT+EY N+ GA VP RVHTVLISTQHDETVTND+IAADLKQHVIKPVIP+KYLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVA+GLARRC+VQVSYAIGVPEPLSVFVDSYGTG IPDK IL+++K+NFDFRPGMI+INLDLKRGGNGRF KTAAYGHFGRDDPD
Sbjct:  150 AKLTEVRKNGTCAWLRPDGKTQVTIEYRNDGGAMVPERVHTVLISTQHDETVTNDQIAADLKQHVIKPVIPEKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVAAGLARRCLVQVSYAIGVPEPLSVFVDSYGTGTIPDKVILELIKKNFDFRPGMITINLDLKRGGNGRFQKTAAYGHFGRDDPD 377          
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK2_DIACA (S-adenosylmethionine synthetase 2 OS=Dianthus caryophyllus GN=SAM2 PE=2 SV=1)

HSP 1 Score: 397.512 bits (1020), Expect = 3.623e-110
Identity = 195/228 (85.53%), Postives = 208/228 (91.23%), Query Frame = 2
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            ++LTEVRKNGTC WLRPDGKTQVTVEYYNENGA VP+RVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP+KYLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYI RQAAKSIVASGLARRCIVQ+SYAIGVPEPLSVFVD+YGTGKI D+EILKIVKENFDFRPGMI+I LDLK+GGN R+LKTAAYGHFGR+DPD
Sbjct:  154 ARLTEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSRKDPTKVDRSGAYIARQAAKSIVASGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIHDREILKIVKENFDFRPGMIAIALDLKKGGN-RYLKTAAYGHFGREDPD 380          
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK3_HORVU (S-adenosylmethionine synthetase 3 OS=Hordeum vulgare GN=SAM3 PE=2 SV=1)

HSP 1 Score: 396.741 bits (1018), Expect = 6.179e-110
Identity = 195/228 (85.53%), Postives = 207/228 (90.79%), Query Frame = 2
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            ++LTEVRKNGTC W+RPDGKTQVTVEY NE+GA VPVRVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP KYLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYI RQAAKSI+ASGLARRCIVQ+SYAIGVPEPLSVFVDSYGTGKIPD+EILK+VKENFDFRPGMISINLDLK+GGN RF+KTAAYGHFGRDD D
Sbjct:  152 ARLTEVRKNGTCAWVRPDGKTQVTVEYLNEDGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPAKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIIASGLARRCIVQISYAIGVPEPLSVFVDSYGTGKIPDREILKLVKENFDFRPGMISINLDLKKGGN-RFIKTAAYGHFGRDDAD 378          
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK_PINBN (S-adenosylmethionine synthetase OS=Pinus banksiana GN=METK PE=2 SV=1)

HSP 1 Score: 396.356 bits (1017), Expect = 8.070e-110
Identity = 194/228 (85.09%), Postives = 205/228 (89.91%), Query Frame = 2
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            +KLTEVRKNGTCPWLRP GKTQVTVEY N+NGA VP RVHTVLISTQHDETV NDEIA DLK+HVIKPVIP+KYLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLS+FVD+YGTG IPDKEIL+I+KE+FDFRPGMISINLDLKRGGNGR  KTAAYGHFGRDDPD
Sbjct:  150 AKLTEVRKNGTCPWLRPHGKTQVTVEYRNDNGAMVPERVHTVLISTQHDETVPNDEIAPDLKEHVIKPVIPEKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSLFVDTYGTGSIPDKEILEIIKEHFDFRPGMISINLDLKRGGNGRSQKTAAYGHFGRDDPD 377          
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK1_VITVI (S-adenosylmethionine synthetase 1 OS=Vitis vinifera GN=METK1 PE=3 SV=1)

HSP 1 Score: 396.356 bits (1017), Expect = 8.070e-110
Identity = 192/228 (84.21%), Postives = 206/228 (90.35%), Query Frame = 2
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            +KLTEVRKNGTCPWLRPDGKTQVTVEY NE GA VP+RVHTVL+STQHDETVTN++IA DLK+HVIKPVIP +YLDD+TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKS+VASGLARRCIVQVSYAIGVPEPLSVFVD+Y TGKIPDK+IL ++K+NFDFRPGMISINLDLKRGGN RF KTAAYGHFGRDDPD
Sbjct:  150 AKLTEVRKNGTCPWLRPDGKTQVTVEYRNEGGAMVPIRVHTVLVSTQHDETVTNEQIAKDLKEHVIKPVIPPQYLDDQTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVPEPLSVFVDTYKTGKIPDKDILALIKKNFDFRPGMISINLDLKRGGNFRFQKTAAYGHFGRDDPD 377          
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK2_HORVU (S-adenosylmethionine synthetase 2 OS=Hordeum vulgare GN=SAM2 PE=2 SV=1)

HSP 1 Score: 395.201 bits (1014), Expect = 1.798e-109
Identity = 194/228 (85.09%), Postives = 205/228 (89.91%), Query Frame = 2
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            ++LTEVRKNGTC WLRPDGKTQVT+EY NE GA VPVRVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP KYLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYI RQAAKSI+ASGLARRCIVQ+SYAIGVPEPLSVFVDSYGTGKIPD+EILK+VKENFDFRPGMISINLDLK+GG  RF+KTAAYGHFGRDD D
Sbjct:  152 ARLTEVRKNGTCAWLRPDGKTQVTIEYLNEGGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPGKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIIASGLARRCIVQISYAIGVPEPLSVFVDSYGTGKIPDREILKLVKENFDFRPGMISINLDLKKGGK-RFIKTAAYGHFGRDDAD 378          
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK1_PETCR (S-adenosylmethionine synthetase 1 (Fragment) OS=Petroselinum crispum GN=SMS-1 PE=2 SV=1)

HSP 1 Score: 395.201 bits (1014), Expect = 1.798e-109
Identity = 191/220 (86.82%), Postives = 202/220 (91.82%), Query Frame = 2
Query:   47 NGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            NGTC WLRPDGKTQVTVEY N++GA VP+RVHT+LISTQHDETVTNDEIAADLK+HVIKPV+P+ YLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPD+EILKIVKE FDFRPGMISINLDLKRGGNGRFLKTAAYGHFGR+DPD
Sbjct:    1 NGTCAWLRPDGKTQVTVEYQNDHGAMVPIRVHTILISTQHDETVTNDEIAADLKEHVIKPVVPENYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDREILKIVKETFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGREDPD 220          
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK_MUSAC (S-adenosylmethionine synthetase OS=Musa acuminata GN=METK PE=2 SV=1)

HSP 1 Score: 394.815 bits (1013), Expect = 2.348e-109
Identity = 194/228 (85.09%), Postives = 208/228 (91.23%), Query Frame = 2
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            ++LTEVRKNGTCPWLRPDGKTQVTVEY N++GA +PVRVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP++YLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAY+ RQAAKSIVAS LARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKENFDFRPG+I+INL LKRGG  R+LKTAAYGHFGRDDPD
Sbjct:  151 ARLTEVRKNGTCPWLRPDGKTQVTVEYRNDHGAMIPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEQYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVASELARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGLITINLGLKRGGY-RYLKTAAYGHFGRDDPD 377          
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK2_PINCO (S-adenosylmethionine synthetase 2 OS=Pinus contorta GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 394.43 bits (1012), Expect = 3.067e-109
Identity = 192/228 (84.21%), Postives = 205/228 (89.91%), Query Frame = 2
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            +KLTEVRKNGTCPWLRPDGKTQVT+EY NE GA VP RVHTVLISTQHDETVTND+IAADLK+HVIKPVIP+KYLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVA+GLARRC+VQVSYAIGV   LS+FVDSYGTG IPDKEIL+I+KE+FDFRPGMI+INLDLKRGGNGRF KTAAYGHFGRDDPD
Sbjct:  150 AKLTEVRKNGTCPWLRPDGKTQVTIEYRNEGGAMVPERVHTVLISTQHDETVTNDQIAADLKEHVIKPVIPEKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVAAGLARRCLVQVSYAIGVRGALSIFVDSYGTGSIPDKEILEIIKEHFDFRPGMITINLDLKRGGNGRFQKTAAYGHFGRDDPD 377          
The following BLAST results are available for this feature:
BLAST of FC931271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK3_ORYSJ2.774e-11084.65S-adenosylmethionine synthetase 3 OS=Oryza sativa ... [more]
METK3_PICSI3.623e-11084.65S-adenosylmethionine synthetase 3 OS=Picea sitchen... [more]
METK2_DIACA3.623e-11085.53S-adenosylmethionine synthetase 2 OS=Dianthus cary... [more]
METK3_HORVU6.179e-11085.53S-adenosylmethionine synthetase 3 OS=Hordeum vulga... [more]
METK_PINBN8.070e-11085.09S-adenosylmethionine synthetase OS=Pinus banksiana... [more]
METK1_VITVI8.070e-11084.21S-adenosylmethionine synthetase 1 OS=Vitis vinifer... [more]
METK2_HORVU1.798e-10985.09S-adenosylmethionine synthetase 2 OS=Hordeum vulga... [more]
METK1_PETCR1.798e-10986.82S-adenosylmethionine synthetase 1 (Fragment) OS=Pe... [more]
METK_MUSAC2.348e-10985.09S-adenosylmethionine synthetase OS=Musa acuminata ... [more]
METK2_PINCO3.067e-10984.21S-adenosylmethionine synthetase 2 OS=Pinus contort... [more]

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Properties
Property NameValue
Genbank descriptionC34103D02EF PostHarvP1 Citrus clementina cDNA clone C34103D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931271 ID=FC931271; Name=FC931271; organism=Citrus clementina; type=EST; length=706bp
CATGTGCTTGCAACAAGCTTGGTCTAAGCTTACAGAAGTGAGGAAGAATG
GGACCTGTCCATGGCTGAGGCCAGATGGCAAAACACAAGTCACTGTTGAG
TATTACAATGAGAATGGCGCCAGGGTTCCTGTTCGTGTCCATACTGTGCT
TATCTCAACTCAGCACGATGAGACTGTAACTAATGATGAGATTGCTGCAG
ATCTCAAGCAACATGTGATCAAGCCCGTGATTCCTGACAAGTACTTGGAT
GACAAAACTATTTTCCATCTTAACCCATCTGGCCGTTTTGTTATTGGTGG
CCCTCACGGTGATGCTGGGCTCACTGGCCGGAAGATTATTATTGATACTT
ATGGTGGCTGGGGGGCACACGGCGGTGGGGCTTTCTCAGGGAAAGATCCT
ACCAAGGTTGATAGAAGCGGTGCTTACATTGTACGGCAAGCTGCTAAGAG
TATTGTGGCAAGTGGGCTTGCCAGGAGATGCATTGTTCAGGTTTCTTACG
CTATTGGTGTGCCCGAGCCTTTGTCAGTTTTTGTTGATAGTTATGGGACT
GGGAAGATCCCTGACAAGGAAATTTTGAAGATTGTGAAGGAGAATTTTGA
TTTTAGGCCTGGGATGATTTCTATTAATCTTGATCTCAAGAGGGGTGGCA
ACGGCAGGTTCTTGAAGACTGCCGCTTATGGGCACTTTGGCAGAGATGAT
CCTGAT
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