FC931271

Overview
NameFC931271
Unique NameFC931271
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15265 contig Ccv1_Contig15265:627..1332. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK_MESCR (S-adenosylmethionine synthetase OS=Mesembryanthemum crystallinum GN=METK PE=2 SV=1)

HSP 1 Score: 394.045 bits (1011), Expect = 4.005e-109
Identity = 195/228 (85.53%), Postives = 206/228 (90.35%), Query Frame = 2
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            ++LTEVRKNGTCPWLRPDGKTQVTVEYYNENGA VPVRVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYI RQAAKSIVA+GLARRCIVQ+SYAIGV EPLSVFVD+YGTGKI DK+ILKIVKE FDFRPGMI+ NLDL RGGN R+LKTAAYGHFGRDD D
Sbjct:  150 ARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVAAGLARRCIVQISYAIGVAEPLSVFVDTYGTGKISDKDILKIVKETFDFRPGMIANNLDLLRGGN-RYLKTAAYGHFGRDDAD 376          
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK1_HORVU (S-adenosylmethionine synthetase 1 OS=Hordeum vulgare GN=SAM1 PE=2 SV=1)

HSP 1 Score: 394.045 bits (1011), Expect = 4.005e-109
Identity = 193/228 (84.65%), Postives = 205/228 (89.91%), Query Frame = 2
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            ++LTEVRKNGTC WLRPDGKTQVT+EY NE GA VPVRVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP KYLD+ TIFHLNPSGRFVIGGPHGDAGLT RKIIIDTY             KDPTKVDRSGAYI RQAAKSI+ASGLARRCIVQ+SYAIGVPEPLSVFVDSYGTGKIPD+EILK+VKENFDFRPGMI+INLDLK+GGN RF+KTAAYGHFGRDD D
Sbjct:  152 ARLTEVRKNGTCAWLRPDGKTQVTIEYLNEGGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPGKYLDENTIFHLNPSGRFVIGGPHGDAGLTARKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIIASGLARRCIVQISYAIGVPEPLSVFVDSYGTGKIPDREILKLVKENFDFRPGMITINLDLKKGGN-RFIKTAAYGHFGRDDAD 378          
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK3_VITVI (S-adenosylmethionine synthetase 3 OS=Vitis vinifera GN=METK3 PE=3 SV=1)

HSP 1 Score: 393.275 bits (1009), Expect = 6.832e-109
Identity = 190/228 (83.33%), Postives = 205/228 (89.91%), Query Frame = 2
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            +KLTEVRKN TCPWLRPDGKTQVTVEY NE GA VP+RVHTVLISTQHDETVTND+IA +L++HVIKPVIP K++DDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKS+VASGLARRC+VQVSYAIGVPEPLSVFVD+Y TGKIPDK+IL ++KENFDFRPGMI+INLDLKRGGN RF KTAAYGHFGRDDPD
Sbjct:  150 AKLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPIRVHTVLISTQHDETVTNDQIAKELREHVIKPVIPSKFMDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYKTGKIPDKDILDLIKENFDFRPGMIAINLDLKRGGNFRFQKTAAYGHFGRDDPD 377          
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK4_POPTR (S-adenosylmethionine synthetase 4 OS=Populus trichocarpa GN=METK4 PE=2 SV=1)

HSP 1 Score: 391.734 bits (1005), Expect = 1.988e-108
Identity = 189/228 (82.89%), Postives = 205/228 (89.91%), Query Frame = 2
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            +KLTEVRKN TCPWLRPDGKTQVTVEY NE GA VP+RVHT+LISTQHDE VTN++IAADLK+HVIKPVIP +YLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKS+VASGLARRCIVQVSYAIGVPEPLSVFVD+Y TGKIPD++IL+++KENFDFRPGMI+INLDL RGGN R+ KTAAYGHFGRDDPD
Sbjct:  150 AKLTEVRKNKTCPWLRPDGKTQVTVEYKNEGGAMVPIRVHTILISTQHDENVTNEQIAADLKEHVIKPVIPVQYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVPEPLSVFVDTYKTGKIPDRDILELIKENFDFRPGMIAINLDLMRGGNSRYQKTAAYGHFGRDDPD 377          
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK1_PEA (S-adenosylmethionine synthetase 1 (Fragment) OS=Pisum sativum GN=SAMS1 PE=2 SV=2)

HSP 1 Score: 391.734 bits (1005), Expect = 1.988e-108
Identity = 193/228 (84.65%), Postives = 203/228 (89.04%), Query Frame = 2
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            ++LTEVRKNGTC WLRPDG TQVTVEYYN+ GA VP+RVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP+KYLD KTI HLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDR GAYIVRQAAKSIVASGLARR IVQ+  AIGVPEPLSVFVD+YGTGKIPD+EILKIVKE FDFRPGMISINLDL RGGNGRFLKTAAYGHFGR+DPD
Sbjct:  125 ARLTEVRKNGTCAWLRPDGNTQVTVEYYNDKGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDSKTICHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRRGAYIVRQAAKSIVASGLARRAIVQLLRAIGVPEPLSVFVDTYGTGKIPDREILKIVKETFDFRPGMISINLDLLRGGNGRFLKTAAYGHFGREDPD 352          
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK3_ARATH (S-adenosylmethionine synthetase 3 OS=Arabidopsis thaliana GN=METK3 PE=1 SV=1)

HSP 1 Score: 389.808 bits (1000), Expect = 7.554e-108
Identity = 190/228 (83.33%), Postives = 203/228 (89.04%), Query Frame = 2
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            +KLTEVRKN TCPWLRPDGKTQVTVEY N+ GA +P+RVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP KYLDD TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKS+VA+GLARRCIVQVSYAIGVPEPLSVFVD+Y TG IPDK+IL ++KE FDFRPGM++INLDLKRGGN RF KTAAYGHFGRDDPD
Sbjct:  150 AKLTEVRKNKTCPWLRPDGKTQVTVEYKNDGGAMIPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPAKYLDDNTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVAAGLARRCIVQVSYAIGVPEPLSVFVDTYKTGTIPDKDILVLIKEAFDFRPGMMAINLDLKRGGNFRFQKTAAYGHFGRDDPD 377          
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK1_PICSI (S-adenosylmethionine synthetase 1 OS=Picea sitchensis GN=METK1 PE=2 SV=1)

HSP 1 Score: 389.808 bits (1000), Expect = 7.554e-108
Identity = 191/230 (83.04%), Postives = 206/230 (89.57%), Query Frame = 2
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSY--GTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            ++LTEVRK+GTCPWLRPDGKTQVTVEY NE GA VP+RVHTVLISTQHDETVTNDEIAADLK+HVIKPV+P +YLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKS+VA+GLARRC+VQVSYAIGVPEPLSVFVD+Y  GTGKI D EILK++KENFDFRPGMISINLDLKRGGN RF KTAAYGHFGR+DPD
Sbjct:  150 ARLTEVRKDGTCPWLRPDGKTQVTVEYKNEGGAMVPLRVHTVLISTQHDETVTNDEIAADLKEHVIKPVVPSQYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVAAGLARRCLVQVSYAIGVPEPLSVFVDTYGTGTGKIQDAEILKLIKENFDFRPGMISINLDLKRGGNMRFQKTAAYGHFGREDPD 379          
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK2_ACTCH (S-adenosylmethionine synthetase 2 OS=Actinidia chinensis GN=SAM2 PE=2 SV=1)

HSP 1 Score: 388.652 bits (997), Expect = 1.683e-107
Identity = 189/228 (82.89%), Postives = 203/228 (89.04%), Query Frame = 2
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            +KLTEVRKN TCPWLRPDGKTQVTVEY NE GA VPVRVHTVLISTQHDETVTN++IA DLK+HVIKPVIP +Y+DD TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAY+VRQAAKS+VASGLARRCIVQVSYAIGVPEPLSVFVD+Y TGKIPDK+IL ++KENFDFRPGMI+INLDLKRGGN R+ KTAAYGHFGRDD D
Sbjct:  150 AKLTEVRKNNTCPWLRPDGKTQVTVEYRNEGGAMVPVRVHTVLISTQHDETVTNEQIAKDLKEHVIKPVIPAQYMDDDTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVVRQAAKSVVASGLARRCIVQVSYAIGVPEPLSVFVDTYKTGKIPDKDILALIKENFDFRPGMIAINLDLKRGGNFRYQKTAAYGHFGRDDAD 377          
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK4_BRAJU (S-adenosylmethionine synthetase 4 OS=Brassica juncea GN=MSAMS4 PE=2 SV=1)

HSP 1 Score: 387.882 bits (995), Expect = 2.870e-107
Identity = 189/228 (82.89%), Postives = 202/228 (88.60%), Query Frame = 2
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            +KLTEVRKN TCPWLRPDGKTQVTVEY NE GA +P+RVHTVLISTQHDETVTNDEIA DLK+HVIKPVIP KYLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKS+VA+GLARRCIVQVSYAIGVPEPLSVFVD+Y TG IPDK+IL ++KE FDFRPGM++INLDLKRGGN RF KTAAYGHFGRDDPD
Sbjct:  150 AKLTEVRKNKTCPWLRPDGKTQVTVEYKNEGGAMIPIRVHTVLISTQHDETVTNDEIAVDLKEHVIKPVIPAKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVATGLARRCIVQVSYAIGVPEPLSVFVDTYKTGTIPDKDILVLIKEAFDFRPGMMAINLDLKRGGNFRFQKTAAYGHFGRDDPD 377          
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK3_SOLLC (S-adenosylmethionine synthetase 3 OS=Solanum lycopersicum GN=SAM3 PE=2 SV=1)

HSP 1 Score: 386.341 bits (991), Expect = 8.351e-107
Identity = 189/228 (82.89%), Postives = 202/228 (88.60%), Query Frame = 2
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            +KLTEVRKN TCPWLRPDGKTQVTVEY N+NGA VP+RVHTVLISTQHDETVTND+IA DLK+HVIKPVIP KYLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKS+VASGLARRCIVQVSYAIGV EPLSVFVD+Y TG IPDK+IL ++KENFDFRPGM+SINLDL RGGN R+ KTAAYGHFGRDDPD
Sbjct:  150 AKLTEVRKNKTCPWLRPDGKTQVTVEYKNDNGAMVPIRVHTVLISTQHDETVTNDQIAQDLKEHVIKPVIPAKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILVLIKENFDFRPGMMSINLDLLRGGNYRYQKTAAYGHFGRDDPD 377          
The following BLAST results are available for this feature:
BLAST of FC931271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_MESCR4.005e-10985.53S-adenosylmethionine synthetase OS=Mesembryanthemu... [more]
METK1_HORVU4.005e-10984.65S-adenosylmethionine synthetase 1 OS=Hordeum vulga... [more]
METK3_VITVI6.832e-10983.33S-adenosylmethionine synthetase 3 OS=Vitis vinifer... [more]
METK4_POPTR1.988e-10882.89S-adenosylmethionine synthetase 4 OS=Populus trich... [more]
METK1_PEA1.988e-10884.65S-adenosylmethionine synthetase 1 (Fragment) OS=Pi... [more]
METK3_ARATH7.554e-10883.33S-adenosylmethionine synthetase 3 OS=Arabidopsis t... [more]
METK1_PICSI7.554e-10883.04S-adenosylmethionine synthetase 1 OS=Picea sitchen... [more]
METK2_ACTCH1.683e-10782.89S-adenosylmethionine synthetase 2 OS=Actinidia chi... [more]
METK4_BRAJU2.870e-10782.89S-adenosylmethionine synthetase 4 OS=Brassica junc... [more]
METK3_SOLLC8.351e-10782.89S-adenosylmethionine synthetase 3 OS=Solanum lycop... [more]

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Properties
Property NameValue
Genbank descriptionC34103D02EF PostHarvP1 Citrus clementina cDNA clone C34103D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931271 ID=FC931271; Name=FC931271; organism=Citrus clementina; type=EST; length=706bp
CATGTGCTTGCAACAAGCTTGGTCTAAGCTTACAGAAGTGAGGAAGAATG
GGACCTGTCCATGGCTGAGGCCAGATGGCAAAACACAAGTCACTGTTGAG
TATTACAATGAGAATGGCGCCAGGGTTCCTGTTCGTGTCCATACTGTGCT
TATCTCAACTCAGCACGATGAGACTGTAACTAATGATGAGATTGCTGCAG
ATCTCAAGCAACATGTGATCAAGCCCGTGATTCCTGACAAGTACTTGGAT
GACAAAACTATTTTCCATCTTAACCCATCTGGCCGTTTTGTTATTGGTGG
CCCTCACGGTGATGCTGGGCTCACTGGCCGGAAGATTATTATTGATACTT
ATGGTGGCTGGGGGGCACACGGCGGTGGGGCTTTCTCAGGGAAAGATCCT
ACCAAGGTTGATAGAAGCGGTGCTTACATTGTACGGCAAGCTGCTAAGAG
TATTGTGGCAAGTGGGCTTGCCAGGAGATGCATTGTTCAGGTTTCTTACG
CTATTGGTGTGCCCGAGCCTTTGTCAGTTTTTGTTGATAGTTATGGGACT
GGGAAGATCCCTGACAAGGAAATTTTGAAGATTGTGAAGGAGAATTTTGA
TTTTAGGCCTGGGATGATTTCTATTAATCTTGATCTCAAGAGGGGTGGCA
ACGGCAGGTTCTTGAAGACTGCCGCTTATGGGCACTTTGGCAGAGATGAT
CCTGAT
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