FC931271

Overview
NameFC931271
Unique NameFC931271
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK2_SOLTU (S-adenosylmethionine synthetase 2 OS=Solanum tuberosum GN=METK2 PE=2 SV=1)

HSP 1 Score: 386.341 bits (991), Expect = 8.351e-107
Identity = 189/228 (82.89%), Postives = 202/228 (88.60%), Query Frame = 2
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            +KLTEVRKN TCPWLRPDGKTQVTVEY N+NGA VP+RVHTVLISTQHDETVTND+IA DLK+HVIKPVIP KYLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKS+VASGLARRCIVQVSYAIGV EPLSVFVD+Y TG IPDK+IL ++KENFDFRPGM+SINLDL RGGN R+ KTAAYGHFGRDDPD
Sbjct:  150 AKLTEVRKNKTCPWLRPDGKTQVTVEYKNDNGAMVPIRVHTVLISTQHDETVTNDQIAQDLKEHVIKPVIPAKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILVLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPD 377          
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK1_TOBAC (S-adenosylmethionine synthetase 1 OS=Nicotiana tabacum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 385.956 bits (990), Expect = 1.091e-106
Identity = 188/228 (82.46%), Postives = 202/228 (88.60%), Query Frame = 2
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            +KLTEVRKN TCPWLRPDGKTQVTVEY N+NGA VP+RVHTVLISTQHDETVTND+IA DLK+HVIKPVIP +YLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKS+VASGLARRCIVQVSYAIGV EPLSVFVD+Y TG IPDK+IL ++KENFDFRPGM+SINLDL RGGN R+ KTAAYGHFGRDDPD
Sbjct:  150 AKLTEVRKNKTCPWLRPDGKTQVTVEYKNDNGAMVPIRVHTVLISTQHDETVTNDQIAQDLKEHVIKPVIPSQYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILTLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPD 377          
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK1_ACTCH (S-adenosylmethionine synthetase 1 OS=Actinidia chinensis GN=SAM1 PE=2 SV=1)

HSP 1 Score: 385.956 bits (990), Expect = 1.091e-106
Identity = 188/228 (82.46%), Postives = 202/228 (88.60%), Query Frame = 2
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            +KLTEVRKN TCPWLRPDGKTQVTVEY NE GA VP+RVHTVLISTQHDETVTND+IA DLK+HVIKPV+P +YLDD TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKS+VASGLARRC+VQVSYAIGV EPLSVFVD+Y TGKI DK+IL ++KENFDFRPGMI+INLDLKRGGN R+ KTAAYGHFGRDDPD
Sbjct:  150 AKLTEVRKNSTCPWLRPDGKTQVTVEYRNEGGAMVPIRVHTVLISTQHDETVTNDQIANDLKKHVIKPVVPAQYLDDNTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCLVQVSYAIGVAEPLSVFVDTYKTGKIADKDILALIKENFDFRPGMIAINLDLKRGGNLRYQKTAAYGHFGRDDPD 377          
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK1_PETHY (S-adenosylmethionine synthetase 1 OS=Petunia hybrida GN=SAM1 PE=2 SV=1)

HSP 1 Score: 383.259 bits (983), Expect = 7.070e-106
Identity = 185/228 (81.14%), Postives = 202/228 (88.60%), Query Frame = 2
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            +KLTEVRKN TCPWLRPDGKTQVTVEY N+NGA +P+RVHT+LISTQHDETVTND+IA DLK+HVIKPV+P +YLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKS+VASGLARRCIVQVSYAIGV EPLSVFVD+Y TG IPDK+IL ++KENFDFRPGM+SINLDL RGGN R+ KTAAYGHFGRDDPD
Sbjct:  150 AKLTEVRKNKTCPWLRPDGKTQVTVEYRNDNGAMIPLRVHTILISTQHDETVTNDQIAQDLKEHVIKPVVPAEYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILTLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPD 377          
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK3_CATRO (S-adenosylmethionine synthetase 3 OS=Catharanthus roseus GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 381.719 bits (979), Expect = 2.057e-105
Identity = 186/228 (81.58%), Postives = 202/228 (88.60%), Query Frame = 2
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            +KLTEVRKN TCPWLRPDGKTQVTVEY NE GA VP+RVHTVLISTQHDETVTN++IA DLK+HVIKPVIP +YLDD+TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKS+VASGLARRC+VQVSYAIGV EPLSVFVD++ TGKIPDK+IL ++KENFDFRPGMI+INLDLKRGGN R+ KTAA GH GRDDPD
Sbjct:  150 AKLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPIRVHTVLISTQHDETVTNEQIAQDLKEHVIKPVIPAQYLDDQTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCLVQVSYAIGVAEPLSVFVDTFKTGKIPDKDILALIKENFDFRPGMIAINLDLKRGGNFRYQKTAALGHLGRDDPD 377          
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK2_PETHY (S-adenosylmethionine synthetase 2 OS=Petunia hybrida GN=SAM2 PE=2 SV=1)

HSP 1 Score: 380.178 bits (975), Expect = 5.985e-105
Identity = 183/228 (80.26%), Postives = 201/228 (88.16%), Query Frame = 2
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            +KLTEVRKN TCPWLRPDGKTQVTVEY N+NGA +P+RVHT+LISTQHDETVTND+IA DLK+HVIKPV+P +YLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKS+VASGLARRCIVQVSYAIGV EPLSVFVD+Y TG IP K++L ++KENFDFRPGM+SINLDL RGGN R+ KTAAYGHFGRDDPD
Sbjct:  150 AKLTEVRKNKTCPWLRPDGKTQVTVEYRNDNGAMIPLRVHTILISTQHDETVTNDQIAQDLKEHVIKPVVPAEYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPGKDVLTLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPD 377          
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK2_TOBAC (S-adenosylmethionine synthetase 2 OS=Nicotiana tabacum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 377.481 bits (968), Expect = 3.879e-104
Identity = 185/231 (80.09%), Postives = 201/231 (87.01%), Query Frame = 2
Query:   14 QAWSKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            Q  +KLTEVRKN TCPWLRPDGKTQVTVEY N+NGA VP+RVHTVLISTQHDE VTN++IA DLK+HVIKPVIP KYLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKS+VA+GLARRCIVQVSYAIGV EPLSVFVD+Y TG IPDK+IL ++KENFDFRPGMI+INLDL RGGN R+ KTAAYGHFGRD+ D
Sbjct:  147 QLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNDNGAMVPIRVHTVLISTQHDEGVTNEQIAQDLKEHVIKPVIPAKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGEGAFSGKDPTKVDRSGAYIVRQAAKSVVAAGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILALIKENFDFRPGMIAINLDLLRGGNFRYQKTAAYGHFGRDEAD 377          
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK2_PEA (S-adenosylmethionine synthetase 2 OS=Pisum sativum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 369.777 bits (948), Expect = 8.089e-102
Identity = 182/222 (81.98%), Postives = 195/222 (87.84%), Query Frame = 2
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHF 688
            + LTEVRKNGTCPWLRPDGKTQVTVEYYN+ GA VP+RVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP+KYLD+KTIFHLNPSGRF  GGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVR+AAKSIVA+GLARRC+VQVSYAIGVPEPLSVFVDSYGTGKIPD+EIL IVKE FDFRPGMISI+LDL RGGNGRF + +    F
Sbjct:  152 ASLTEVRKNGTCPWLRPDGKTQVTVEYYNDKGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFRHGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVREAAKSIVANGLARRCLVQVSYAIGVPEPLSVFVDSYGTGKIPDREILNIVKEAFDFRPGMISISLDLLRGGNGRFFEDSCIWTF 373          
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK_CHLRE (S-adenosylmethionine synthetase OS=Chlamydomonas reinhardtii GN=METM PE=3 SV=1)

HSP 1 Score: 362.073 bits (928), Expect = 1.687e-99
Identity = 173/227 (76.21%), Postives = 193/227 (85.02%), Query Frame = 2
Query:   26 KLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            KLTEVRKNG CPWLRPDGKTQVTVEY  E GA +P RVHT+LISTQH+  VTN++I  DL +HVIKPV+P KYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYI RQAAKS+VASGLA+RC+VQVSY+I V EPLSVFVD+YGTG +PD EILK+++++FDFRPG+I  NLDLKRGGN R+ KTAAYGHFGRDDPD
Sbjct:  154 KLTEVRKNGVCPWLRPDGKTQVTVEYKREGGAMIPQRVHTILISTQHNPDVTNEKIREDLMEHVIKPVVPAKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSVVASGLAKRCLVQVSYSIAVAEPLSVFVDTYGTGTMPDAEILKLIRKHFDFRPGLIGKNLDLKRGGNKRYQKTAAYGHFGRDDPD 380          
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK_OSTLU (S-adenosylmethionine synthetase OS=Ostreococcus lucimarinus (strain CCE9901) GN=METK-1 PE=3 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 8.390e-91
Identity = 165/225 (73.33%), Postives = 182/225 (80.89%), Query Frame = 2
Query:   26 KLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDD 700
            +LT VRK+GTCPW+ PDGKTQVT+EY NE GA VP RVHT+LISTQH E VTN++IA DL   VIK V+P+KYLD  TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYI RQAAKS+VA+GLARRC+ Q+SYAIGV EPLSV VD+YGTGKIPD EIL  VK  FDFRPGM+   LDLKRGGN R+  TAAYGHFGRD+
Sbjct:  150 RLTVVRKDGTCPWVLPDGKTQVTIEYENEGGAMVPKRVHTILISTQHIEGVTNEKIAEDLMNEVIKKVVPEKYLDADTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYISRQAAKSVVAAGLARRCLFQISYAIGVAEPLSVHVDTYGTGKIPDSEILAKVKAAFDFRPGMMGKALDLKRGGNKRYQTTAAYGHFGRDE 374          
The following BLAST results are available for this feature:
BLAST of FC931271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_SOLTU8.351e-10782.89S-adenosylmethionine synthetase 2 OS=Solanum tuber... [more]
METK1_TOBAC1.091e-10682.46S-adenosylmethionine synthetase 1 OS=Nicotiana tab... [more]
METK1_ACTCH1.091e-10682.46S-adenosylmethionine synthetase 1 OS=Actinidia chi... [more]
METK1_PETHY7.070e-10681.14S-adenosylmethionine synthetase 1 OS=Petunia hybri... [more]
METK3_CATRO2.057e-10581.58S-adenosylmethionine synthetase 3 OS=Catharanthus ... [more]
METK2_PETHY5.985e-10580.26S-adenosylmethionine synthetase 2 OS=Petunia hybri... [more]
METK2_TOBAC3.879e-10480.09S-adenosylmethionine synthetase 2 OS=Nicotiana tab... [more]
METK2_PEA8.089e-10281.98S-adenosylmethionine synthetase 2 OS=Pisum sativum... [more]
METK_CHLRE1.687e-9976.21S-adenosylmethionine synthetase OS=Chlamydomonas r... [more]
METK_OSTLU8.390e-9173.33S-adenosylmethionine synthetase OS=Ostreococcus lu... [more]

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Properties
Property NameValue
Genbank descriptionC34103D02EF PostHarvP1 Citrus clementina cDNA clone C34103D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931271 ID=FC931271; Name=FC931271; organism=Citrus clementina; type=EST; length=706bp
CATGTGCTTGCAACAAGCTTGGTCTAAGCTTACAGAAGTGAGGAAGAATG
GGACCTGTCCATGGCTGAGGCCAGATGGCAAAACACAAGTCACTGTTGAG
TATTACAATGAGAATGGCGCCAGGGTTCCTGTTCGTGTCCATACTGTGCT
TATCTCAACTCAGCACGATGAGACTGTAACTAATGATGAGATTGCTGCAG
ATCTCAAGCAACATGTGATCAAGCCCGTGATTCCTGACAAGTACTTGGAT
GACAAAACTATTTTCCATCTTAACCCATCTGGCCGTTTTGTTATTGGTGG
CCCTCACGGTGATGCTGGGCTCACTGGCCGGAAGATTATTATTGATACTT
ATGGTGGCTGGGGGGCACACGGCGGTGGGGCTTTCTCAGGGAAAGATCCT
ACCAAGGTTGATAGAAGCGGTGCTTACATTGTACGGCAAGCTGCTAAGAG
TATTGTGGCAAGTGGGCTTGCCAGGAGATGCATTGTTCAGGTTTCTTACG
CTATTGGTGTGCCCGAGCCTTTGTCAGTTTTTGTTGATAGTTATGGGACT
GGGAAGATCCCTGACAAGGAAATTTTGAAGATTGTGAAGGAGAATTTTGA
TTTTAGGCCTGGGATGATTTCTATTAATCTTGATCTCAAGAGGGGTGGCA
ACGGCAGGTTCTTGAAGACTGCCGCTTATGGGCACTTTGGCAGAGATGAT
CCTGAT
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