FC931272

Overview
NameFC931272
Unique NameFC931272
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC931272_ssr610 microsatellite FC931272_ssr610:610..621. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig9193 contig Ccv1_Contig9193:169..845. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931272 vs. ExPASy Swiss-Prot
Match: CIPKU_ORYSJ (CBL-interacting protein kinase 30 OS=Oryza sativa subsp. japonica GN=CIPK30 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.522e-27
Identity = 77/217 (35.48%), Postives = 113/217 (52.07%), Query Frame = 2
Query:    2 ITKLLDPNPNSRIAISKIMESSWFKK------------SAPKVVITKQEME----------FEADKSSK------------QPETLNAFHIISLSEGFDLSPXXXXXXXXXXXXXXXXTTRPASSVISRFEEVAKAVKFNVKTSES-RVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVW-MSTADNPTL 544
            + +LLDPNP +RI ISKIM+  WF++            SAP V++ ++E            F  +K  +            +P ++NAF IIS S G DLS                 T    ++++S+ EE+A+A +F+ K  E  RV L+G + GRKG LAI A+IF V P + VVEV+K  GD+ ++  F   EL+P+L D+VW     D+P L
Sbjct:  249 LARLLDPNPKTRITISKIMDRPWFQQATCPLGDMSLVASAPSVLLARKEASQQHDDEEDDGFAREKKKRSNVIMSSPVIDVRPSSMNAFDIISRSRGLDLSKMFDAEERRSEARFS--TRETTTAIVSKLEEIAEAGRFSFKLKEKGRVELEGSQDGRKGALAIEAEIFKVAPEVHVVEVRKTGGDSPDFRDFYKQELKPSLGDMVWAWQGGDSPPL 463          
BLAST of FC931272 vs. ExPASy Swiss-Prot
Match: CIPKB_ORYSJ (CBL-interacting protein kinase 11 OS=Oryza sativa subsp. japonica GN=CIPK11 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.338e-26
Identity = 79/212 (37.26%), Postives = 115/212 (54.25%), Query Frame = 2
Query:    2 ITKLLDPNPNSRIAISKIMESSWFKKS----------------APKVVITKQEMEF---EADKSSKQPETLNAFHIISLSEGFDLSPXXXXXXXXXXXXXXXXTTRPASSVISRFEEVAKAVKFNVKTSESRV-RLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMSTAD---NPTLGLNLEEQQ 568
            I K+LD +P++RI+I +I  S+W++K                 +  V  T    E    E ++ S     LNAF IISLS GF+LS                 T +P ++V+ + +E+AK +K  VK  ++ V RL   + G+KG L ++A+IF VTPS L+VE+KK NGDT+EY +    ++RPALKDIVW+   D   N    L  E+QQ
Sbjct:  244 IHKILDSDPSTRISIPRIKRSTWYRKPVEINAKNSEAATTNSISSGVATTSGSAECSTSEENQGSLSLPNLNAFDIISLSTGFNLS--GFFEDTHGHQEERFTTRQPVTTVLGKLKELAKRLKLKVKKKDNGVLRLAAPKEGKKGFLELDAEIFEVTPSFLLVELKKTNGDTMEYRKLVKEDIRPALKDIVWVWQGDEHLNSQSILQGEQQQ 453          
BLAST of FC931272 vs. ExPASy Swiss-Prot
Match: CIPKN_ARATH (CBL-interacting serine/threonine-protein kinase 23 OS=Arabidopsis thaliana GN=CIPK23 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.283e-26
Identity = 68/191 (35.60%), Postives = 107/191 (56.02%), Query Frame = 2
Query:    2 ITKLLDPNPNSRIAISKIMESSWFKKS--APK-----VVITKQEMEFEADKSSKQ------------PETLNAFHIISLSEGFDLSPXXXXXXXXXXXXXXXXTTRPASSVISRFEEVAKAVKFNVKTSESRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVW 517
            I ++LDPNP +RI  ++++E+ WFKK   APK     V +   +  F+    SK             P T+NAF +IS S+G +L                  +   A+ ++++ E  A  + F+VKT+  +++L G++SGRKG+LA+  ++F V PSL +VE++K  GDTLE+++F  N L   LKDIVW
Sbjct:  263 IKRILDPNPATRITFAEVIENEWFKKGYKAPKFENADVSLDDVDAIFDDSGESKNLVVERREEGLKTPVTMNAFELISTSQGLNLGSLFEKQMGLVKRKTRFTSKSSANEIVTKIEAAAAPMGFDVKTNNYKMKLTGEKSGRKGQLAVATEVFQVAPSLYMVEMRKSGGDTLEFHKFYKN-LTTGLKDIVW 452          
BLAST of FC931272 vs. ExPASy Swiss-Prot
Match: CIPK9_ARATH (CBL-interacting serine/threonine-protein kinase 9 OS=Arabidopsis thaliana GN=CIPK9 PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 2.982e-26
Identity = 63/191 (32.98%), Postives = 105/191 (54.97%), Query Frame = 2
Query:    2 ITKLLDPNPNSRIAISKIMESSWFKKSAPKVVITKQEMEFEAD---------------KSSKQPETLNAFHIISLSEGFDLSPXXXXXXXXXXXXXXXXTTRPASSVISRFEEVAKAVKFNVKTSESRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMSTA 529
            I ++L+PNP +RI+I++++E  WFKK        + + +   D               +  ++P ++NAF +IS S  F L                  + R AS ++S+ EE AK + FNV+    +++++G +SGRKG+L++  ++F V PSL VVE++K  GDTLE+++F  N     LKD+VW + A
Sbjct:  251 IKRILEPNPITRISIAELLEDEWFKKGYKPPSFDQDDEDITIDDVDAAFSNSKECLVTEKKEKPVSMNAFELISSSSEFSLENLFEKQAQLVKKETRFTSQRSASEIMSKMEETAKPLGFNVRKDNYKIKMKGDKSGRKGQLSVATEVFEVAPSLHVVELRKTGGDTLEFHKFYKN-FSSGLKDVVWNTDA 440          
BLAST of FC931272 vs. ExPASy Swiss-Prot
Match: CIPKN_ORYSJ (CBL-interacting protein kinase 23 OS=Oryza sativa subsp. japonica GN=CIPK23 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.894e-26
Identity = 63/189 (33.33%), Postives = 105/189 (55.56%), Query Frame = 2
Query:    2 ITKLLDPNPNSRIAISKIMESSWFKKSAPKVVITKQEMEFE----------------ADKSSKQPETLNAFHIISLSEGFDLSPXXXXXXXXXXXXXXXXTTR-PASSVISRFEEVAKAVKFNVKTSESRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVW 517
            I K+LDPNP++RI I++++ + WFKK          ++  +                 ++  ++P  +NAF +IS S+G +L                   +R PA+ ++S+ E  A  + FNV+    +++LQG+  GRKG+LAI  ++F VTPSL +VE++K NGDTLE+++F  N +   LKD++W
Sbjct:  245 IKKILDPNPSTRITIAELINNEWFKKGYQPPRFETADVNLDDINSIFNESGDQTQLVVERREERPSVMNAFELISTSQGLNLGTLFEKQSQGSVKRETRFASRLPANEILSKIEAAAGPMGFNVQKRNYKLKLQGENPGRKGQLAIATEVFEVTPSLYMVELRKSNGDTLEFHKFYHN-ISNGLKDVMW 432          
BLAST of FC931272 vs. ExPASy Swiss-Prot
Match: CIPKA_ORYSJ (CBL-interacting protein kinase 10 OS=Oryza sativa subsp. japonica GN=CIPK10 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.894e-26
Identity = 75/202 (37.13%), Postives = 111/202 (54.95%), Query Frame = 2
Query:    2 ITKLLDPNPNSRIAISKIMESSWFK---------KSAP-----KVVITKQEMEF--------EADKSSKQPETLNAFHIISLSEGFDLSPXXXXXXXXXXXXXXXXTTRPASSVISRFEEVAKAVKFN-VKTSESRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMSTADNP 538
            + ++LDPNP +RI++S+IME  WF+         K+ P     KVV    +  F        E  + ++   +LNAF IISLS GFDLS                 +T  A+++  + E+VAK ++   +K +   ++++G + GRKG ++INA+IF +TP   +VE  K NGDTLEY Q    E+RPALKDIVW    + P
Sbjct:  244 LRRILDPNPATRISVSEIMEDPWFRVGLNSDLLNKTIPTDKVDKVVHVDMDSTFGNLSNNINEGKQEAENLTSLNAFDIISLSSGFDLSAMFEDENSKEESKFT--STNTATTITKKLEDVAKNLRLKFLKKNGGLLKMEGSKPGRKGVMSINAEIFQITPDFHLVEFTKINGDTLEY-QKVKQEMRPALKDIVWAWQGEQP 442          
BLAST of FC931272 vs. ExPASy Swiss-Prot
Match: CIPK2_ARATH (CBL-interacting serine/threonine-protein kinase 2 OS=Arabidopsis thaliana GN=CIPK2 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.676e-26
Identity = 74/210 (35.24%), Postives = 109/210 (51.90%), Query Frame = 2
Query:    2 ITKLLDPNPNSRIAISKIMESSWFKKSAPKVVITKQEMEFEADKSSKQP--------------------ETLNAFHIISLSEGFDLSPXXXXXXXXXXXXXXXXTTRPASSVISRFEEVAKAVKFNV-KTSESRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMSTADNPTLGLNLEEQQ 568
            + K+LDPN  +RI I+KI ESSWF+K         ++ME +  + +  P                     TLNAF II+LS GF L+                 + +PAS +IS+  EVAK +K  + K      +L+  + G+ G L ++A+IF VTP+  +VEVKK NGDT+EY +    +LRPAL DIVW+   +       L+++Q
Sbjct:  243 LCKMLDPNHETRITIAKIKESSWFRKGLHLKQKKMEKMEKQQVREATNPMEAGGSGQNENGENHEPPRLATLNAFDIIALSTGFGLA--GLFGDVYDKRESRFASQKPASEIISKLVEVAKCLKLKIRKQGAGLFKLERVKEGKNGILTMDAEIFQVTPTFHLVEVKKCNGDTMEYQKLVEEDLRPALADIVWVWQGEKEKEEQLLQDEQ 450          
BLAST of FC931272 vs. ExPASy Swiss-Prot
Match: CIPKF_ORYSJ (CBL-interacting protein kinase 15 OS=Oryza sativa subsp. japonica GN=CIPK15 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.933e-25
Identity = 70/189 (37.04%), Postives = 104/189 (55.03%), Query Frame = 2
Query:    8 KLLDPNPNSRIAISKIMESSWFKKSAPKVVITKQEMEFEADKSSKQP-------------------ETLNAFHIISLSEGFDLSPXXXXXXXXXXXXXXXXTTRPASSVISRFEEVAKAVKFNVKTSESRV-RLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIV 514
            K++DPNP++RI+I KI ES+WF+K   +  I K+    E    +  P                     LNAF IIS S+GFDLS                 + + AS++IS+ E+VAKA+   V+  ++ V ++QG++ GR G L  + +IF VT S  ++E+K+ +GD+LEY Q     +RPALKDIV
Sbjct:  246 KIMDPNPSTRISIQKIKESTWFRKGPEENRILKERTLNENTTKNVAPVLGVRRKKNAHEDVKPMSVTNLNAFEIISFSKGFDLS--GMFIVKEWRNEARFTSDKSASTIISKLEDVAKALNLRVRKKDNGVVKMQGRKEGRNGVLQFDIEIFEVTTSYHIIEMKQTSGDSLEYRQLLEEGIRPALKDIV 432          
BLAST of FC931272 vs. ExPASy Swiss-Prot
Match: CIPKE_ORYSJ (CBL-interacting protein kinase 14 OS=Oryza sativa subsp. japonica GN=CIPK14 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.297e-25
Identity = 70/189 (37.04%), Postives = 103/189 (54.50%), Query Frame = 2
Query:    8 KLLDPNPNSRIAISKIMESSWFKKSAPKVVITKQEMEFE-------------------ADKSSKQPETLNAFHIISLSEGFDLSPXXXXXXXXXXXXXXXXTTRPASSVISRFEEVAKAVKFNVKTSESRV-RLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIV 514
            K++DPNP++RI+I KI ES+WF+K   +  I K+    E                    D        LNAF IIS S+GFDLS                 + + AS++IS+ E+VAKA+   V+  ++ V ++QG++ GR G L  + +IF VT S  ++E+K+ +GD+LEY Q     +RPALKDIV
Sbjct:  246 KIMDPNPSTRISIQKIKESTWFRKGPEENRILKERTLNENTTKNVALVLGVRRKKNAHEDVKPMSVTNLNAFEIISFSKGFDLS--GMFIVKEWRNEARFTSDKSASTIISKLEDVAKALNLRVRKKDNGVVKMQGRKEGRNGVLQFDIEIFEVTTSYHIIEMKQTSGDSLEYRQLLEEGIRPALKDIV 432          
BLAST of FC931272 vs. ExPASy Swiss-Prot
Match: CIPKV_ORYSJ (CBL-interacting protein kinase 31 OS=Oryza sativa subsp. japonica GN=CIPK31 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.306e-25
Identity = 66/187 (35.29%), Postives = 102/187 (54.55%), Query Frame = 2
Query:    2 ITKLLDPNPNSRIAISKIMESSWFKKS-APKVVITKQEMEFE--------------ADKSSKQPETLNAFHIISLSEGFDLSPXXXXXXXXXXXXXXXXTTRPASSVISRFEEVAKAVKFNVKTSESRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVW 517
            IT++LDPNP +RI IS+I+E  WFKK   P V   K E  F+               +++  QP ++NAF +ISL++  +L                  +  P   +I++ EE AK + F+++    ++R++  ++GRKG L +  ++F V PSL VVE+KK  GDTLE+ +F    L   LKD+VW
Sbjct:  252 ITRILDPNPTTRITISQILEDPWFKKGYKPPVFDEKYETSFDDVDAAFGDSEDRHVKEETEDQPTSMNAFELISLNQALNLD-NLFEAKKEYKRETRFTSQCPPKEIITKIEEAAKPLGFDIQKKNYKMRMENLKAGRKGNLNVATEVFQVAPSLHVVELKKAKGDTLEFQKF-YRTLSTQLKDVVW 436          
The following BLAST results are available for this feature:
BLAST of FC931272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
CIPKU_ORYSJ3.522e-2735.48CBL-interacting protein kinase 30 OS=Oryza sativa ... [more]
CIPKB_ORYSJ1.338e-2637.26CBL-interacting protein kinase 11 OS=Oryza sativa ... [more]
CIPKN_ARATH2.283e-2635.60CBL-interacting serine/threonine-protein kinase 23... [more]
CIPK9_ARATH2.982e-2632.98CBL-interacting serine/threonine-protein kinase 9 ... [more]
CIPKN_ORYSJ3.894e-2633.33CBL-interacting protein kinase 23 OS=Oryza sativa ... [more]
CIPKA_ORYSJ3.894e-2637.13CBL-interacting protein kinase 10 OS=Oryza sativa ... [more]
CIPK2_ARATH8.676e-2635.24CBL-interacting serine/threonine-protein kinase 2 ... [more]
CIPKF_ORYSJ1.933e-2537.04CBL-interacting protein kinase 15 OS=Oryza sativa ... [more]
CIPKE_ORYSJ3.297e-2537.04CBL-interacting protein kinase 14 OS=Oryza sativa ... [more]
CIPKV_ORYSJ4.306e-2535.29CBL-interacting protein kinase 31 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionC34103D03EF PostHarvP1 Citrus clementina cDNA clone C34103D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931272 ID=FC931272; Name=FC931272; organism=Citrus clementina; type=EST; length=677bp
GATCACCAAGCTTCTCGATCCAAACCCTAACTCAAGAATCGCTATTTCAA
AGATCATGGAGTCTTCTTGGTTCAAAAAGTCTGCTCCCAAGGTTGTGATA
ACTAAGCAAGAGATGGAATTTGAAGCTGACAAGTCATCGAAGCAACCTGA
GACTCTAAATGCGTTTCATATCATCTCTTTGTCGGAAGGGTTTGATTTGT
CACCTTTGTTTGAGGAGAAAAAGAGAGCGGAAAGAGAGGAGCTGAGATTT
GCAACCACGAGGCCTGCAAGCAGTGTGATCTCAAGATTTGAAGAGGTGGC
CAAGGCCGTTAAGTTTAATGTCAAAACGAGCGAGTCAAGAGTCAGATTAC
AAGGCCAAGAAAGCGGAAGGAAAGGCAAATTGGCTATCAATGCTGACATC
TTTGCCGTTACACCGTCGCTTTTGGTGGTGGAAGTGAAGAAAGATAATGG
TGATACATTGGAGTACAATCAATTCTGTAGCAACGAGCTTCGGCCGGCGC
TTAAGGACATTGTCTGGATGTCAACTGCTGACAATCCCACGCTTGGCTTG
AACCTGGAGGAGCAACAAATTTAAAATTGATTGCTGATGAATTGTGGGTA
TATCTCAGATGATTGATTGATTGTTGTTGATTATGGGATTTAGAGTTTGA
TTAATTTGATGGTGATCATGGAATATC
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