FC931272

Overview
NameFC931272
Unique NameFC931272
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC931272_ssr610 microsatellite FC931272_ssr610:610..621. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig9193 contig Ccv1_Contig9193:169..845. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931272 vs. ExPASy Swiss-Prot
Match: CIPKP_ARATH (CBL-interacting serine/threonine-protein kinase 25 OS=Arabidopsis thaliana GN=CIPK25 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.173e-22
Identity = 69/196 (35.20%), Postives = 102/196 (52.04%), Query Frame = 2
Query:    2 ITKLLDPNPNSRIAISKIMESSWFKKSAPKVVITK------QEMEFEADKSSK----------QPETLNAFHIIS-LSEGFDLSPXXXXXXXXXXXXXXXXTTRPASSVISRFEEVAKAVKFNVK-TSESRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMSTADN 535
            I+KLL  +PN RI+I  IM + WF+K+    +  K      Q +E E   ++            P+  NAF  IS +S GFDLS                 +   AS ++ + E + K +   VK T + +V+L G+  GRKG++A+ A++F V P + VVE+ K  GDTLEYN+     +RPAL++IVW    DN
Sbjct:  274 ISKLLVVDPNKRISIPAIMRTPWFRKNINSPIEFKIDELEIQNVEDETPTTTATTATTTTTPVSPKFFNAFEFISSMSSGFDLSSLFESKRKLRSMFTSRWS---ASEIMGKLEGIGKEMNMKVKRTKDFKVKLFGKTEGRKGQIAVTAEVFEVAPEVAVVELCKSAGDTLEYNRLYEEHVRPALEEIVWSWHGDN 466          
BLAST of FC931272 vs. ExPASy Swiss-Prot
Match: CIPK3_ARATH (CBL-interacting serine/threonine-protein kinase 3 OS=Arabidopsis thaliana GN=CIPK3 PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 3.412e-22
Identity = 65/188 (34.57%), Postives = 98/188 (52.13%), Query Frame = 2
Query:    2 ITKLLDPNPNSRIAISKIMESSWFKKS-APKV--------------VITKQEMEFEADKSSKQPETLNAFHIISLSEGFDLSPXXXXXXXXXXXXXXXXTTRP-ASSVISRFEEVAKAVKFNVKTSESRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVW 517
            IT++LDPNP +R+   ++ E  WFKK   P V              V    E     +K  +QP  +NAF IIS+S G +L                  T R  A+ +I + EE AK + F+V+    ++RL+  ++GRKG L +  +IF V PSL +V+V K  GDTLE+++F   +L  +L+ +VW
Sbjct:  246 ITRILDPNPMTRVTPQEVFEDEWFKKDYKPPVFEERDDSNMDDIDAVFKDSEEHLVTEKREEQPAAINAFEIISMSRGLNLE--NLFDPEQEFKRETRITLRGGANEIIEKIEEAAKPLGFDVQKKNYKMRLENVKAGRKGNLNVATEIFQVAPSLHMVQVSKSKGDTLEFHKF-YKKLSNSLEQVVW 430          
BLAST of FC931272 vs. ExPASy Swiss-Prot
Match: CIPK5_ARATH (CBL-interacting serine/threonine-protein kinase 5 OS=Arabidopsis thaliana GN=CIPK5 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.693e-21
Identity = 68/197 (34.52%), Postives = 102/197 (51.78%), Query Frame = 2
Query:    2 ITKLLDPNPNSRIAISKIMESSWFKKSAPKVVITK-------------QEMEFEADKSSK----QPETLNAFHIIS-LSEGFDLSPXXXXXXXXXXXXXXXXTTRPASSVISRFEEVAKAVKFNVK-TSESRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMSTADN 535
            I+KLL  +P+ RI+I  IM + W +K+    +  K             +E E + D  ++     P+  NAF  IS +S GFDLS                 +   A+ V+ + E V K +   VK T + +V+++G+  GRKG+L++ A++F V P + VVE  K  GDTLEY++    E+RPAL DIVW    DN
Sbjct:  244 ISKLLVVDPDRRISIPAIMRTPWLRKNFTPPLAFKIDEPICSQSSKNNEEEEEDGDCENQTEPISPKFFNAFEFISSMSSGFDLSSLFESKRKVQSVFTSRSS---ATEVMEKIETVTKEMNMKVKRTKDFKVKMEGKTEGRKGRLSMTAEVFEVAPEISVVEFCKSAGDTLEYDRLYEEEVRPALNDIVWSWHGDN 437          
BLAST of FC931272 vs. ExPASy Swiss-Prot
Match: CIPKJ_ORYSJ (CBL-interacting protein kinase 19 OS=Oryza sativa subsp. japonica GN=CIPK19 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.211e-21
Identity = 59/155 (38.06%), Postives = 85/155 (54.84%), Query Frame = 2
Query:   59 ESSWFKKSAPK---VVITKQEMEFEADKSSKQPETLNAFHIISLSEGFDLSPXXXXXXXXXXXXXXXXTTRPASSVISRFEEVAKAVKFNVKTSESRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIV 514
            ES W   S+       ++ +E       S  +P +LNAF IIS S+GFDLS                 +  P  ++I++ EE+AK   F V+  + RV ++G   G KG L I A+IF +TPSL+VVEVKK  GD  EY+ FC+ EL+P ++ +V
Sbjct:  344 ESGWESDSSVASCPATLSSEERRQRPLGSLTRPASLNAFDIISFSKGFDLS----GLFEERGSEVRFISAEPMQTIITKLEEIAKVKSFFVRRKDWRVSIEGTREGLKGPLTIGAEIFELTPSLVVVEVKKKAGDKEEYDDFCNRELKPGMQHLV 494          
BLAST of FC931272 vs. ExPASy Swiss-Prot
Match: CIPKX_ORYSJ (CBL-interacting protein kinase 33 OS=Oryza sativa subsp. japonica GN=CIPK33 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.888e-21
Identity = 64/204 (31.37%), Postives = 98/204 (48.04%), Query Frame = 2
Query:    2 ITKLLDPNPNSRIAISKIMESSWFKKSAPKV--------------VITKQEMEFEADKSSKQPETLNAFHIISLSEGFDLSPXXXXXXXXXXXXXXXXTTRPASSVISRFEEVAKAVKFNVKTSESRV----------------RLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMS 523
            +T++LDPNP +RI I +I+E  WFKK   +                +     E    +  ++PE LNAF +IS+S G +L                  +  P   ++ + EE AK + F+V+    ++                RL+  ++GRKG L +  +I  V PSL +VEV+K  GDTLE+++F  N L   LKD+VW S
Sbjct:  245 LTRILDPNPMTRITIPEILEDEWFKKGYKRPEFDEKYDTTLDDVDAVFNDSEEHHVTEKKEEPEALNAFELISMSAGLNLG-NLFDSEQEFKRETRFTSKCPPKEIVRKIEEAAKPLGFDVQKKNYKICSPCLTTICMNIPFKLRLEKVKAGRKGNLNVATEILQVAPSLHMVEVRKAKGDTLEFHKFYKN-LSRTLKDVVWKS 446          
BLAST of FC931272 vs. ExPASy Swiss-Prot
Match: CIPKF_ARATH (CBL-interacting serine/threonine-protein kinase 15 OS=Arabidopsis thaliana GN=CIPK15 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 2.888e-21
Identity = 65/183 (35.52%), Postives = 93/183 (50.82%), Query Frame = 2
Query:    2 ITKLLDPNPNSRIAISKIMESSWFKKSAPKVVITKQEMEFE----------ADKSSKQPETLNAFHIISLSEGFDLSPXXXXXXXXXXXXXXXXTTRPASSVISRFEEVAKAVKFNV--KTSESRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIV 514
            + ++LDPNPN+R++  KIM+SSWF+K   + V    E E E          A+K  K+   LNAF IISLS GFDLS                 + R AS +  +  E+ K +K  V  K  E RV++  + +       + A++F + PS  +V +KK  GDT EY +     +RPAL D V
Sbjct:  243 LKRILDPNPNTRVSTEKIMKSSWFRKGLQEEVKESVEEETEVDAEAEGNASAEKEKKRCINLNAFEIISLSTGFDLS--GLFEKGEEKEEMRFTSNREASEITEKLVEIGKDLKMKVRKKEHEWRVKMSAEAT------VVEAEVFEIAPSYHMVVLKKSGGDTAEYKRVMKESIRPALIDFV 417          
BLAST of FC931272 vs. ExPASy Swiss-Prot
Match: CIPKG_ORYSJ (CBL-interacting protein kinase 16 OS=Oryza sativa subsp. japonica GN=CIPK16 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.097e-20
Identity = 64/192 (33.33%), Postives = 99/192 (51.56%), Query Frame = 2
Query:    2 ITKLLDPNPNSRIAISKIMESSWFKKS----APKVVITKQEMEFE------ADKSSKQPETLNAFHIIS-LSEGFDLSPXXXXXXXXXXXXXXXXTTR-PASSVISRFEEVAKAVKFNVKTSES-RVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMSTADNP 538
            I +LL  +P  RI+I +IM + WFKK      P   ++ ++ E +       D  +  P T NAF +IS +S GFDLS                 T+R PA++VI + E V +++ ++    +  ++RL+    G  G+LA+  +   V   + VVE   D GD LE+N+FC+ ++RP L DIVW    D P
Sbjct:  254 IVRLLVVDPAKRISIPEIMRTPWFKKGFVPPVPTSPVSPKKWEEDDVLLDGGDSGAMSPRTCNAFQLISSMSSGFDLS----GMFESEQKAATVFTSRAPAATVIQKLEAVGRSLGYSATRGKGWKLRLEATADGANGRLAVTVEALEVAADVAVVEFAHDAGDELEFNKFCAVDVRPGLADIVWAWQGDRP 441          
BLAST of FC931272 vs. ExPASy Swiss-Prot
Match: CIPKO_ORYSJ (CBL-interacting protein kinase 24 OS=Oryza sativa subsp. japonica GN=CIPK24 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.433e-20
Identity = 64/192 (33.33%), Postives = 98/192 (51.04%), Query Frame = 2
Query:    2 ITKLLDPNPNSRIAISKIMESSWFKKSAPKVVITKQEME-------------FEADKSSKQ-------PETLNAFHIISLSEGFDLSPXXXXXXXXXXXXXXXXTTRPASSVISRFEEVAKAVKFNVKTSESRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVW 517
            I ++LDPNP +RI I +I E +WFKK+   V I + E E              E    S+Q       P  +NAF +I+LS+G DLS                 + +PA ++++  E VA+ +   V +   ++RL+G  S R    A+   +F V PSL +V+V+K  GDTLEY++F  N L   ++ I+W
Sbjct:  248 IHRILDPNPKTRITIEQIREDTWFKKTY--VAIKRGEDENVDLDDVQAVFDNIEDKYVSEQVTHNDGGPLVMNAFEMITLSQGLDLSALFDRQQEFVKRQTRFVSRKPAKTIVATIEVVAETMGLKVHSQNYKLRLEGVSSNRMSPFAVVLQVFEVAPSLFMVDVRKVAGDTLEYHRFYKN-LCNKMESIIW 436          
BLAST of FC931272 vs. ExPASy Swiss-Prot
Match: CIPKC_ORYSJ (CBL-interacting protein kinase 12 OS=Oryza sativa subsp. japonica GN=CIPK12 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.447e-20
Identity = 52/127 (40.94%), Postives = 74/127 (58.27%), Query Frame = 2
Query:  134 SSKQPETLNAFHIISLSEGFDLSPXXXXXXXXXXXXXXXXTTRPASSVISRFEEVAKAVKFNVKTSESRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIV 514
            S  +P +LNAF IIS S+GF+LS                 +  P S ++ + EE+AK   F V+  + RV ++G   G KG L I A+IF +TPSL+VVEVK+  GD  EY  FC+ EL+P ++ +V
Sbjct:  380 SLPRPASLNAFDIISFSKGFNLS----GLFEERGNEIRFVSGEPMSDIVKKLEEIAKVKSFTVRRKDWRVSIEGTREGVKGPLTIGAEIFELTPSLVVVEVKRKAGDNEEYEDFCNMELKPGMQHLV 502          
BLAST of FC931272 vs. ExPASy Swiss-Prot
Match: CIPKO_ARATH (CBL-interacting serine/threonine-protein kinase 24 OS=Arabidopsis thaliana GN=CIPK24 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.530e-19
Identity = 58/197 (29.44%), Postives = 100/197 (50.76%), Query Frame = 2
Query:    2 ITKLLDPNPNSRIAISKIMESSWFKKSAPKVVITKQE------------------MEFEADKSSKQPETLNAFHIISLSEGFDLSPXXXXXXXXXXXXXXXXTTRPASSVISRFEEVAKAVKFNVKTSESRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMSTADNP 538
            I ++LDPNP +RI I  I +  WF+ +   +   ++E                  +    +++ + P  +NAF +I+LS+G +LS                 + R  S +I+  E VA ++ F   T   + RL+G  S + G+LA+  +I+ V PSL +V+V+K  G+TLEY++F   +L   L++I+W +T   P
Sbjct:  241 IHRILDPNPKTRIQIQGIKKDPWFRLNYVPIRAREEEEVNLDDIRAVFDGIEGSYVAENVERNDEGPLMMNAFEMITLSQGLNLSALFDRRQDFVKRQTRFVSRREPSEIIANIEAVANSMGFKSHTRNFKTRLEGLSSIKAGQLAVVIEIYEVAPSLFMVDVRKAAGETLEYHKF-YKKLCSKLENIIWRATEGIP 436          
The following BLAST results are available for this feature:
BLAST of FC931272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
CIPKP_ARATH1.173e-2235.20CBL-interacting serine/threonine-protein kinase 25... [more]
CIPK3_ARATH3.412e-2234.57CBL-interacting serine/threonine-protein kinase 3 ... [more]
CIPK5_ARATH1.693e-2134.52CBL-interacting serine/threonine-protein kinase 5 ... [more]
CIPKJ_ORYSJ2.211e-2138.06CBL-interacting protein kinase 19 OS=Oryza sativa ... [more]
CIPKX_ORYSJ2.888e-2131.37CBL-interacting protein kinase 33 OS=Oryza sativa ... [more]
CIPKF_ARATH2.888e-2135.52CBL-interacting serine/threonine-protein kinase 15... [more]
CIPKG_ORYSJ1.097e-2033.33CBL-interacting protein kinase 16 OS=Oryza sativa ... [more]
CIPKO_ORYSJ1.433e-2033.33CBL-interacting protein kinase 24 OS=Oryza sativa ... [more]
CIPKC_ORYSJ5.447e-2040.94CBL-interacting protein kinase 12 OS=Oryza sativa ... [more]
CIPKO_ARATH3.530e-1929.44CBL-interacting serine/threonine-protein kinase 24... [more]

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Properties
Property NameValue
Genbank descriptionC34103D03EF PostHarvP1 Citrus clementina cDNA clone C34103D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931272 ID=FC931272; Name=FC931272; organism=Citrus clementina; type=EST; length=677bp
GATCACCAAGCTTCTCGATCCAAACCCTAACTCAAGAATCGCTATTTCAA
AGATCATGGAGTCTTCTTGGTTCAAAAAGTCTGCTCCCAAGGTTGTGATA
ACTAAGCAAGAGATGGAATTTGAAGCTGACAAGTCATCGAAGCAACCTGA
GACTCTAAATGCGTTTCATATCATCTCTTTGTCGGAAGGGTTTGATTTGT
CACCTTTGTTTGAGGAGAAAAAGAGAGCGGAAAGAGAGGAGCTGAGATTT
GCAACCACGAGGCCTGCAAGCAGTGTGATCTCAAGATTTGAAGAGGTGGC
CAAGGCCGTTAAGTTTAATGTCAAAACGAGCGAGTCAAGAGTCAGATTAC
AAGGCCAAGAAAGCGGAAGGAAAGGCAAATTGGCTATCAATGCTGACATC
TTTGCCGTTACACCGTCGCTTTTGGTGGTGGAAGTGAAGAAAGATAATGG
TGATACATTGGAGTACAATCAATTCTGTAGCAACGAGCTTCGGCCGGCGC
TTAAGGACATTGTCTGGATGTCAACTGCTGACAATCCCACGCTTGGCTTG
AACCTGGAGGAGCAACAAATTTAAAATTGATTGCTGATGAATTGTGGGTA
TATCTCAGATGATTGATTGATTGTTGTTGATTATGGGATTTAGAGTTTGA
TTAATTTGATGGTGATCATGGAATATC
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