FC931283
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_BORBR (1-deoxy-D-xylulose-5-phosphate synthase OS=Bordetella bronchiseptica GN=dxs PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 6.581e-58 Identity = 124/222 (55.86%), Postives = 152/222 (68.47%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGI 663 DVGIAEQHAVTFAAGLA EG KP AIYS+FLQRGYDQ+VHDV LQ L V FA+DRAGLVGADG TH G +DI F+ C+PNMVV APSDE+E +++T P+ R+PRG G GA + PL GKG + EG R+AILG+G++VQ + AA I TVAD RF KPLD +L+ +LA H+ L+TVEE ++ GG GS V L +G+ Sbjct: 361 DVGIAEQHAVTFAAGLACEGQKPVVAIYSTFLQRGYDQLVHDVALQNLDVTFALDRAGLVGADGATHAGNYDIAFLRCVPNMVVAAPSDESEARLLLST-CYEHPGPASVRYPRGAGCGAAVGEGLATVPL--GKGLVRREGRRIAILGFGTLVQAALGAAG-----QIDATVADMRFVKPLDRELVLELAARHDALVTVEEAAIMGGAGSAVLETLAEAGV 574
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_RALEJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Ralstonia eutropha (strain JMP134) GN=dxs PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 8.596e-58 Identity = 124/227 (54.63%), Postives = 153/227 (67.40%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRI-----LMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGI 663 DVGIAEQHAVTFA G+A EG+KP AIYS+FLQRGYDQ++HDV LQ LPV FA+DRAGLVGADG TH GA+DI ++ C+PNM+VM PSDE E ++ T A + P+ R+PRG G G K P +GKG + G RVA LG+GS+V + AA Q + +VAD RF KPLD +L+++LA EH L+TVEEGSV GG GS V L +GI Sbjct: 365 DVGIAEQHAVTFAGGMACEGLKPIVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIAYLRCIPNMMVMTPSDENECRQLL-TTAFHQNCPTAVRYPRGAGQGVATEAVLKDVP--VGKGVMRRTGGARSGQRVAFLGFGSMVHPALGAA-----QALDASVADMRFVKPLDVELVKRLAEEHNYLVTVEEGSVMGGAGSAVLEALAEAGI 583
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_PROMH (1-deoxy-D-xylulose-5-phosphate synthase OS=Proteus mirabilis (strain HI4320) GN=dxs PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 8.596e-58 Identity = 117/217 (53.92%), Postives = 152/217 (70.05%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFL 648 DV IAEQHAVTFAAGLA G KP AIYS+FLQR YDQV+HDV +QKLPV FA+DR G+VGADG TH GAFD++F+ C+PNM++MAPSDE E M+ T + P R+PRG+G+GA L P ++ L IGKG I +G +AIL +G+++ + + A + + TVAD RF KPLD +LI LA +H+IL+T+EE ++ GG GS V L Sbjct: 365 DVAIAEQHAVTFAAGLAIGGYKPIVAIYSTFLQRAYDQVIHDVAIQKLPVLFAIDRGGIVGADGQTHQGAFDLSFLRCIPNMIIMAPSDENECRQMLHTGYHYQEGPVAVRYPRGSGVGAPLQPLSE---LPIGKGIIRRQGKSIAILNFGTLLPEALDVA-----EKLDATVADMRFIKPLDKELILSLAKQHDILVTLEENAIMGGAGSGVNELL 573
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_PROM4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Prochlorococcus marinus (strain MIT 9211) GN=dxs PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 8.596e-58 Identity = 117/213 (54.93%), Postives = 149/213 (69.95%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHV 636 DVGIAEQHAVT AAG+A +G++P AIYS+FLQR YDQ++HDV +QKLPV F +DRAG+VGADGPTH G +DI+++ +PN VMAP DEAEL M+ T + +D P R PRG+G G L PL+IG+G IL +GD + IL YGS+V V A +LK IS TV +ARF +PLD LI LA ++T+EEG++ GGFGS V Sbjct: 365 DVGIAEQHAVTLAAGMACDGLRPVVAIYSTFLQRAYDQLIHDVGIQKLPVTFVLDRAGIVGADGPTHQGQYDISYLRSVPNFTVMAPKDEAELQRMLVT-CLENDGPCALRIPRGSGEGVTLMEEG-WEPLKIGRGEILEDGDDLLILAYGSMVTPAVQTAELLKQAGISSTVVNARFLRPLDQALIHPLARRIGKVVTIEEGALGGGFGSAV 575
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_PHOPR (1-deoxy-D-xylulose-5-phosphate synthase OS=Photobacterium profundum GN=dxs PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 8.596e-58 Identity = 118/223 (52.91%), Postives = 157/223 (70.40%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGIL 666 DV IAEQHAVT A+G+A G P AIYS+FLQRGYDQ++HDV + +LPV FA+DR GLVGADG TH GAFD++FM C+PN+V+MAPSDE E M+ T PS R+PRGNG+GA + + T LEIGKG I +G+++AIL +G++++ + AA + ++ TVAD RF KPLD +LI +LA H++L+TVEE ++ GG GS V F+ S L Sbjct: 365 DVAIAEQHAVTLASGMAIGGYNPIVAIYSTFLQRGYDQLIHDVAIMELPVMFAIDRGGLVGADGQTHQGAFDLSFMRCIPNIVIMAPSDENECRQMLYTGHK-HQGPSAVRYPRGNGLGAEI--QKEMTALEIGKGIIRRQGEKIAILNFGTMLEYALEAA-----EKLNATVADMRFVKPLDEELILELAANHDVLVTVEENAIAGGAGSGVIEFMMKSKCL 579
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_METFK (1-deoxy-D-xylulose-5-phosphate synthase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=dxs PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 8.596e-58 Identity = 116/222 (52.25%), Postives = 157/222 (70.72%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGI 663 DVGIAEQHA+TFAAG+A +G+KP AIYS+FLQR YDQ +HD+ LQ LPV FA+DRAGLVGADGPTH G+FD++++ C+PN+++MAPSDE E M+ T A + D PS R+PRG G GA + + + P IGKG + +G VAIL +GS++ + AA + + TVA+ RF KPLD +LI QLA+ H +++TVEE +V GG G+ V + + I Sbjct: 358 DVGIAEQHALTFAAGMACDGLKPVVAIYSTFLQRAYDQFIHDIALQNLPVMFAIDRAGLVGADGPTHAGSFDLSYLRCIPNIIIMAPSDENECRQMLYT-AYLHDGPSAVRYPRGGGPGATITRDMQLLP--IGKGELRRQGSWVAILAFGSMLAPALEAA-----ETLDATVANMRFVKPLDANLINQLASSHTLIVTVEENAVMGGAGAAVMECMQAADI 571
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_ENTS8 (1-deoxy-D-xylulose-5-phosphate synthase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=dxs PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 8.596e-58 Identity = 117/213 (54.93%), Postives = 148/213 (69.48%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHV 636 DV IAEQHAVTFAAGLA G KP AIYS+FLQR YDQV+HDV +QKLPV FA+DRAG+VGADG TH GAFD++++ C+P+MV+M PSDE E M+ T +D PS R+PRGN +G L P K L IGKG + G++VA+L +G+++ + AA L + T+ D RF KPLD LI +LA HE L+T+EE +V GG GS V Sbjct: 365 DVAIAEQHAVTFAAGLAIGGYKPVVAIYSTFLQRAYDQVIHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPDMVIMTPSDENECRQMLFTGYHYNDGPSAVRYPRGNALGVTLEPLQK---LPIGKGVVKRHGEKVALLNFGTLLPEATQAAEAL-----NATLVDMRFVKPLDEALIMELAGRHEALVTIEENAVMGGAGSGV 569
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS2_GEOMG (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=dxs2 PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 8.596e-58 Identity = 122/224 (54.46%), Postives = 151/224 (67.41%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILD 669 DVGIAEQHA+TFAAGLA++G +P AIYS+FLQR YDQV HDV LQKLPV A+DR GLVG DGPTH G FD++++ LP M +MAP DE EL HM+ T A+ RP R+PRG G G LP + LEIG+G +L EGD VAI+ GS V AA +L+++ I TV +ARF KPLD +LI A ++TVEE ++ GGFGS V L G+ D Sbjct: 363 DVGIAEQHALTFAAGLAADGFRPVTAIYSTFLQRAYDQVFHDVCLQKLPVTMALDRGGLVGDDGPTHHGTFDLSYLRHLPEMTLMAPKDENELQHMLKT-AIYAGRPVALRYPRGAGYG--LPLDQTIQSLEIGRGELLTEGDDVAIVAIGSTVYPAQEAAKLLEARGIRATVVNARFVKPLDRELILGAARRTGCIVTVEENALQGGFGSAVLELLADEGMTD 583
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_SHESH (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella sediminis (strain HAW-EB3) GN=dxs PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.123e-57 Identity = 116/217 (53.46%), Postives = 150/217 (69.12%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFL 648 D IAEQHAVT AG A EG+KP AIYS+FLQRGYDQ++HDV LQKLPV FA+DR G+VGADGPTH GAFD++FM +PNMV+MAPSDE E M+ T + P+ R+PRG+ G P + L IGKG I +G +VAIL +G+++ + AA + I TVAD RF KPLD +L+++LA+ H++L+TVEE ++ GG GS V L Sbjct: 365 DAAIAEQHAVTLGAGFACEGLKPVVAIYSTFLQRGYDQLIHDVALQKLPVLFAIDRGGIVGADGPTHQGAFDLSFMRTVPNMVIMAPSDENECRQMLYTGYCYREGPTAVRYPRGSATGE--PQVEEMQALPIGKGLIKRQGQKVAILNFGTLLADVLTAA-----ESIDATVADMRFVKPLDVELVKELASSHDLLVTVEENAIMGGAGSGVLELL 574
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_VIBSL (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio splendidus (strain LGP32) GN=dxs PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.466e-57 Identity = 122/229 (53.28%), Postives = 156/229 (68.12%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILME------GDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGIL 666 DV IAEQHAVT A G+A G KP AIYS+FLQRGYDQ++HDV + LPV FA+DRAGLVGADG TH GAFD++FM C+PNMV+MAPSDE E M+ T PS R+PRGNG+G + ++ T LEIGKGRI+ E G +VAIL +G+ ++ + A+ I TVAD RF KPLD LI+QLA +H++L+T+EE ++ GG G+ V FL +L Sbjct: 365 DVAIAEQHAVTLATGMAIAGDKPIVAIYSTFLQRGYDQLIHDVAIMDLPVMFAIDRAGLVGADGQTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGHQ-HTGPSAVRYPRGNGMGTEI--QSEFTALEIGKGRIVRESKKAKDGSKVAILSFGTFLESALQTADA-----IDATVADMRFVKPLDEALIKQLAADHDVLVTIEENAIAGGAGAGVIEFLMQEKLL 585 The following BLAST results are available for this feature:
BLAST of FC931283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931283 ID=FC931283; Name=FC931283; organism=Citrus clementina; type=EST; length=677bpback to top |