FC931283
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_SHEPA (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=dxs PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.466e-57 Identity = 114/217 (52.53%), Postives = 151/217 (69.59%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFL 648 D IAEQHAVT AG A EG KP AIYS+FLQRGYDQ++HDV LQ+LPV FA+DR G+VGADGPTH GAFD++FM +PNMV+MAPSDE E M+ T +D P+ R+PRG+ GA T + IGKG I +G ++AIL +G+ +LA+++ ++ + TVAD RF KPLD +L++QLA H++L+TVEE ++ GG GS + L Sbjct: 365 DAAIAEQHAVTLGAGFACEGYKPVVAIYSTFLQRGYDQMIHDVALQRLPVLFAIDRGGIVGADGPTHQGAFDLSFMRIVPNMVIMAPSDENECRQMLYTGYCYNDGPTAVRYPRGSATGA--KQVETMTAMPIGKGLIKRQGKKIAILNFGT-----LLASSLTAAEALDATVADMRFVKPLDVELVKQLAESHDMLVTVEENAIMGGAGSGILELL 574
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_SHESA (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella sp. (strain ANA-3) GN=dxs PE=3 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 1.915e-57 Identity = 116/217 (53.46%), Postives = 146/217 (67.28%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFL 648 D IAEQHAVT AG A EG KP AIYS+FLQRGYDQ++HDV LQ+LPV FA+DR G+VGADGPTH GAFD++FM C+PNMV+MAPSDE E M+ T D PS R+PRG+ GA T L IGKG I G +A+L +G+ LAA + ++ + TV D RF KPLD DL++++A H++L+TVEE ++ GG GS V L Sbjct: 365 DAAIAEQHAVTLGAGFACEGFKPVVAIYSTFLQRGYDQLIHDVALQRLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGSATGAT--QVEAMTALPIGKGVIKRLGKGIAMLNFGT-----TLAAALTAAESLDATVVDMRFVKPLDVDLVKEMAQTHDVLVTVEENAIMGGAGSGVLELL 574
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_SHEB5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=dxs PE=3 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 1.915e-57 Identity = 116/213 (54.46%), Postives = 146/213 (68.54%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHV 636 D IAEQHAVT +AG A EG KP AIYS+FLQR YDQ++HDV LQKLPV FA+DR G+VGADGPTH GAFD++FM C+PNMV+MAPSDE E M+ T D PS R+PRG GA T L IGKG I G R+AIL +G+ +LA+ + ++ + TV D RF KPLD DL++++A HE+L+TVEE ++ GG G+ V Sbjct: 365 DAAIAEQHAVTLSAGFACEGFKPVVAIYSTFLQRAYDQLIHDVALQKLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGCATGAT--QVEAMTALPIGKGVIKRVGKRIAILNFGT-----LLASALTAAESLDATVVDMRFVKPLDVDLVKEMAQTHEVLVTVEENAIMGGAGAGV 570
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_PSEA6 (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=dxs PE=3 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 1.915e-57 Identity = 117/217 (53.92%), Postives = 151/217 (69.59%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFGSHVCHFL 648 DV IAEQHAVTFAAGLA EG AIYS+FLQR YDQ++HDV LQ LPV FA+DRAGLVGADGPTH GAFDI F+ C+PNMV+M P+DE E M+ T + ++P+ R+PRG+G G + P+N LEIGK R + +G++VAIL +G ++ AA +L + TV D RF KPLDT+ + +A HE+LIT+E+G + GG G V +L Sbjct: 365 DVAIAEQHAVTFAAGLAKEGQNAVVAIYSTFLQRAYDQLIHDVALQNLPVLFAIDRAGLVGADGPTHQGAFDIPFLRCIPNMVIMTPADENECRQMLYTGHKL-NKPAAVRYPRGSGTG--VKPDNTMQALEIGKSRTIRQGEKVAILNFGVLLPYAEKAAEVL-----NATVIDMRFVKPLDTEAVANVAKNHELLITLEDGATTGGAGGAVAEYL 573
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_ACISJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Acidovorax sp. (strain JS42) GN=dxs PE=3 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 1.915e-57 Identity = 117/222 (52.70%), Postives = 151/222 (68.02%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGI 663 DVGIAEQHAVTFAAG+A EGVKP AIYS+FLQR YDQ++HDV LQ LPV FA+DRAGLVGADG TH GA+DI F+ C+P+M + P+DE E ++ T A D P R+PRG G+G P+ +G P GKG + G R+AIL +G+++ + AA Q + TV + R+ KPLDT L+ Q+A EH+ L+TVEEG + GG GS V L +G+ Sbjct: 363 DVGIAEQHAVTFAAGMACEGVKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIAFVRCIPHMSMACPADERECRQLL-TTAYEQDHPVAVRYPRGAGVGVAPLPDLEGLP--FGKGEVRRTGQRIAILAFGTLLYPALQAA-----QALDATVVNMRWAKPLDTQLLLQVAAEHDALVTVEEGCIMGGAGSAVAEALAAAGL 576
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_YERPY (1-deoxy-D-xylulose-5-phosphate synthase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=dxs PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.501e-57 Identity = 118/217 (54.38%), Postives = 154/217 (70.97%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFL 648 DV IAEQHAVTFAAGLA G KP AIYS+FLQR YDQ++HDV +Q LPV FA+DR GLVGADG TH GAFD++FM C+PNMV+MAPSDE E M+ T + P+ R+PRGNG AVL P L IGKG + EG+++AIL +G+++ Q LAA ++++ T+ D RF KPLD +L+ ++A +H++L+TVEE ++ GG GS V L Sbjct: 365 DVAIAEQHAVTFAAGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAIDRGGLVGADGQTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYT-GYHHNGPAAVRYPRGNGTSAVLEPLEM---LPIGKGVLRREGEKIAILCFGTLLAQAQLAA-----ENLNATLVDMRFVKPLDEELVLEMAAKHQVLVTVEENAIMGGAGSGVNELL 572
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_YERPP (1-deoxy-D-xylulose-5-phosphate synthase OS=Yersinia pestis (strain Pestoides F) GN=dxs PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.501e-57 Identity = 118/217 (54.38%), Postives = 154/217 (70.97%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFL 648 DV IAEQHAVTFAAGLA G KP AIYS+FLQR YDQ++HDV +Q LPV FA+DR GLVGADG TH GAFD++FM C+PNMV+MAPSDE E M+ T + P+ R+PRGNG AVL P L IGKG + EG+++AIL +G+++ Q LAA ++++ T+ D RF KPLD +L+ ++A +H++L+TVEE ++ GG GS V L Sbjct: 365 DVAIAEQHAVTFAAGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAIDRGGLVGADGQTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYT-GYHHNGPAAVRYPRGNGTSAVLEPLEM---LPIGKGVLRREGEKIAILCFGTLLAQAQLAA-----ENLNATLVDMRFVKPLDEELVLEMAAKHQVLVTVEENAIMGGAGSGVNELL 572
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_YERPN (1-deoxy-D-xylulose-5-phosphate synthase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=dxs PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.501e-57 Identity = 118/217 (54.38%), Postives = 154/217 (70.97%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFL 648 DV IAEQHAVTFAAGLA G KP AIYS+FLQR YDQ++HDV +Q LPV FA+DR GLVGADG TH GAFD++FM C+PNMV+MAPSDE E M+ T + P+ R+PRGNG AVL P L IGKG + EG+++AIL +G+++ Q LAA ++++ T+ D RF KPLD +L+ ++A +H++L+TVEE ++ GG GS V L Sbjct: 365 DVAIAEQHAVTFAAGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAIDRGGLVGADGQTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYT-GYHHNGPAAVRYPRGNGTSAVLEPLEM---LPIGKGVLRREGEKIAILCFGTLLAQAQLAA-----ENLNATLVDMRFVKPLDEELVLEMAAKHQVLVTVEENAIMGGAGSGVNELL 572
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_YERPG (1-deoxy-D-xylulose-5-phosphate synthase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=dxs PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.501e-57 Identity = 118/217 (54.38%), Postives = 154/217 (70.97%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFL 648 DV IAEQHAVTFAAGLA G KP AIYS+FLQR YDQ++HDV +Q LPV FA+DR GLVGADG TH GAFD++FM C+PNMV+MAPSDE E M+ T + P+ R+PRGNG AVL P L IGKG + EG+++AIL +G+++ Q LAA ++++ T+ D RF KPLD +L+ ++A +H++L+TVEE ++ GG GS V L Sbjct: 365 DVAIAEQHAVTFAAGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAIDRGGLVGADGQTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYT-GYHHNGPAAVRYPRGNGTSAVLEPLEM---LPIGKGVLRREGEKIAILCFGTLLAQAQLAA-----ENLNATLVDMRFVKPLDEELVLEMAAKHQVLVTVEENAIMGGAGSGVNELL 572
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_YERPE (1-deoxy-D-xylulose-5-phosphate synthase OS=Yersinia pestis GN=dxs PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.501e-57 Identity = 118/217 (54.38%), Postives = 154/217 (70.97%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFL 648 DV IAEQHAVTFAAGLA G KP AIYS+FLQR YDQ++HDV +Q LPV FA+DR GLVGADG TH GAFD++FM C+PNMV+MAPSDE E M+ T + P+ R+PRGNG AVL P L IGKG + EG+++AIL +G+++ Q LAA ++++ T+ D RF KPLD +L+ ++A +H++L+TVEE ++ GG GS V L Sbjct: 365 DVAIAEQHAVTFAAGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAIDRGGLVGADGQTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYT-GYHHNGPAAVRYPRGNGTSAVLEPLEM---LPIGKGVLRREGEKIAILCFGTLLAQAQLAA-----ENLNATLVDMRFVKPLDEELVLEMAAKHQVLVTVEENAIMGGAGSGVNELL 572 The following BLAST results are available for this feature:
BLAST of FC931283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931283 ID=FC931283; Name=FC931283; organism=Citrus clementina; type=EST; length=677bpback to top |