FC931283
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS2_ROSDO (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=dxs2 PE=3 SV=1) HSP 1 Score: 274.248 bits (700), Expect = 4.246e-73 Identity = 138/223 (61.88%), Postives = 167/223 (74.89%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQH VTF+A LA+ G+KPFCA+YS+FLQRGYDQVVHDV +Q+LPVRFA+DRAGLVGADG TH G+FDI +++ LP VVMA +DEAEL HMVATA DD P FRFPRG G G +P G LEIGKGRI+ EG RVAIL +G+ + + A L ++ I+ T+ADARF KPLD ++I L HE LITVEEG++GGFGSHV L+ G+ D Sbjct: 370 DVGIAEQHGVTFSAALAAGGMKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIAYLANLPGFVVMAAADEAELKHMVATAVAHDDGPIAFRFPRGEGNGVDMP--EVGEVLEIGKGRIITEGTRVAILSFGTRLAEVQKAGEALAARGITPTIADARFAKPLDREMILDLVANHEALITVEEGAIGGFGSHVAQLLSDEGVFD 590
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_SPHWW (1-deoxy-D-xylulose-5-phosphate synthase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=dxs PE=3 SV=1) HSP 1 Score: 271.937 bits (694), Expect = 2.107e-72 Identity = 135/224 (60.27%), Postives = 170/224 (75.89%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDG 672 DVGIAEQHAVTFAAGLA++G +PFCAIYS+FLQR YDQVVHDV +Q LPVRFA+DRAGLVGADG TH G+FDIT+++ LPNMVVMA +DEAEL+HMV TAAV D P R+PRGNG+G LP + L IGKGRI+ EG VA+L G+ + + + AA+ L + +S TVAD RF KPLD +I+ L HE+ +T+EEG++GG G+HV + G++DG Sbjct: 366 DVGIAEQHAVTFAAGLAAQGYRPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFDITYLATLPNMVVMAAADEAELVHMVHTAAVHDSGPIALRYPRGNGVGVALPAAPE--RLAIGKGRIVREGKTVALLSLGTRLGEALRAADQLDALGLSTTVADLRFAKPLDEAMIQTLLTSHEVAVTIEEGAIGGLGAHVLTLASDLGLIDG 587
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS1_ROSDO (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=dxs1 PE=3 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 2.752e-72 Identity = 137/224 (61.16%), Postives = 168/224 (75.00%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGD-RVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQH VTFAA +A+ G+KPFCAIYS+FLQRGYDQ+VHDV LQ LPVRFA+DRAGLVGADG TH G+FDI ++ LP MVVMA +DEAEL+HMVATA +D P FR+PRGNG G LP G LEIGKGR++ EGD VAIL G+++ C AA +L+++ I+ T+ADARF KPLD LI L H+ LITVE+G++ GFG+ V + G+LD Sbjct: 368 DVGIAEQHGVTFAAAMAATGLKPFCAIYSTFLQRGYDQIVHDVALQGLPVRFAIDRAGLVGADGATHAGSFDIGYLGALPGMVVMAAADEAELVHMVATAGAHNDGPIAFRYPRGNGTGVPLP--ETGRVLEIGKGRMIREGDGEVAILSLGTLLSDCEAAARILEAEGINATIADARFAKPLDMALIANLVQTHKALITVEQGAMAGFGAMVLQSMAAEGLLD 589
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_RHOCA (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodobacter capsulatus GN=dxs PE=3 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 3.595e-72 Identity = 134/223 (60.09%), Postives = 169/223 (75.78%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQHAVTFAAG+A+ G+KPF A+YSSF+QRGYDQ+VHDV LQ LPVR +DRAGLVG DG TH GAFD++ ++ LPN VMA +DEAEL HMV TAA D P R+PRG G G +P +G LEIGKGR++ EG VAIL +G+ + Q + AA ML+++ +S TVADARFC+PLDTDLI +L H LIT+E+G++GGFG+ V H+L +G L+ Sbjct: 367 DVGIAEQHAVTFAAGMAAAGLKPFLALYSSFVQRGYDQLVHDVALQNLPVRLMIDRAGLVGQDGATHAGAFDVSMLANLPNFTVMAAADEAELCHMVVTAAAHDSGPIALRYPRGEGRGVEMP--ERGEVLEIGKGRVMTEGTEVAILSFGAHLAQALKAAEMLEAEGVSTTVADARFCRPLDTDLIDRLIEGHAALITLEQGAMGGFGAMVLHYLARTGQLE 587
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_ERYLH (1-deoxy-D-xylulose-5-phosphate synthase OS=Erythrobacter litoralis (strain HTCC2594) GN=dxs PE=3 SV=1) HSP 1 Score: 268.855 bits (686), Expect = 1.784e-71 Identity = 131/223 (58.74%), Postives = 170/223 (76.23%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQH VTFAAGLA++G++PF AIYS+FLQR YDQVVHDV +Q LPVRFA+DRAGLVGADG TH G+FD+T+++ LPN VVMA +DEAEL+HM TAA D P FR+PRG GIG LP + LEIGKGRI+ G +VA+L G+ +++ AA+ L+++ +S T+AD RF KPLDT+LI QL HE+++T+EE S+GG G+HV + + G+ D Sbjct: 366 DVGIAEQHGVTFAAGLAAQGMRPFAAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFDVTYLATLPNFVVMAAADEAELVHMTYTAAEHDSGPIAFRYPRGGGIGIDLPETPE--KLEIGKGRIVKHGSKVALLSLGTRLEEAKRAADELEAKGLSTTIADMRFAKPLDTELIAQLMKNHEVVVTIEEASIGGLGAHVLTYASDEGLTD 586
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_SPHAL (1-deoxy-D-xylulose-5-phosphate synthase OS=Sphingopyxis alaskensis GN=dxs PE=3 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 3.043e-71 Identity = 134/223 (60.09%), Postives = 170/223 (76.23%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQHAVTFAAGLA++G++PF AIYS+FLQR YDQVVHDV +Q LPVRFA+DRAGLVGADG TH G+FDIT+++ LPNMVVMA +DEAEL+HM TAA D P FR+PRGNG G LP + LEIGKGR++ EG VAIL G+ + + + AA+ L+++ +S +V D RF KPLD +LIR+ HE+ +TVEEGS+GG G+HV + G++D Sbjct: 366 DVGIAEQHAVTFAAGLAAQGMRPFAAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFDITYLATLPNMVVMAAADEAELVHMTYTAAEHDAGPIAFRYPRGNGTGVALPAVPQ--KLEIGKGRVVREGKTVAILSLGTRLAEALKAADTLEARGLSTSVIDLRFAKPLDEELIRRTLAAHEVCVTVEEGSIGGLGAHVLTLASDEGLID 586
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS2_ZYMMO (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Zymomonas mobilis GN=dxs2 PE=3 SV=2) HSP 1 Score: 258.07 bits (658), Expect = 3.149e-68 Identity = 129/223 (57.85%), Postives = 164/223 (73.54%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQHAVTFAAGLA+ G KPFC +YS+FLQRGYDQ+VHDV +Q LPVRFA+DRAGLVGADG TH G+FD+ FM LPNMVVMAPSDE EL +MV + A D P R+PRGNG+G L + P IGKGR++ G +VAIL G+ +++ + AA+ L +Q +S +VAD RF KPLD L RQL H+++IT+EEG++GGF + V + G++D Sbjct: 366 DVGIAEQHAVTFAAGLAAAGYKPFCCLYSTFLQRGYDQLVHDVAIQNLPVRFAVDRAGLVGADGATHAGSFDLAFMVNLPNMVVMAPSDERELANMVHSMAHYDQGPISVRYPRGNGVGVSLEGEKEILP--IGKGRLIRRGKKVAILSLGTRLEESLKAADRLDAQGLSTSVADMRFAKPLDEALTRQLLKSHQVIITIEEGALGGFATQVLTMASDEGLMD 586
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS1_ZYMMO (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Zymomonas mobilis GN=dxs1 PE=3 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 3.149e-68 Identity = 129/223 (57.85%), Postives = 164/223 (73.54%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQHAVTFAAGLA+ G KPFC +YS+FLQRGYDQ+VHDV +Q LPVRFA+DRAGLVGADG TH G+FD+ FM LPNMVVMAPSDE EL +MV + A D P R+PRGNG+G L + P IGKGR++ G +VAIL G+ +++ + AA+ L +Q +S +VAD RF KPLD L RQL H+++IT+EEG++GGF + V + G++D Sbjct: 366 DVGIAEQHAVTFAAGLAAAGYKPFCCLYSTFLQRGYDQLVHDVAIQNLPVRFAVDRAGLVGADGATHAGSFDLAFMVNLPNMVVMAPSDERELANMVHSMAHYDQGPISVRYPRGNGVGVSLEGEKEILP--IGKGRLIRRGKKVAILSLGTRLEESLKAADRLDAQGLSTSVADMRFAKPLDEALTRQLLKSHQVIITIEEGALGGFATQVLTMASDEGLMD 586
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_THEEB (1-deoxy-D-xylulose-5-phosphate synthase OS=Thermosynechococcus elongatus (strain BP-1) GN=dxs PE=3 SV=2) HSP 1 Score: 239.195 bits (609), Expect = 1.514e-62 Identity = 123/223 (55.16%), Postives = 155/223 (69.51%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGIL 666 DVGIAEQHAVT AAG+A++G++P AIYS+FLQR YDQ+VHDV +QKLPV F MDRAG+VGADGPTH G +DI ++ CLPNMV+MAP DEAEL M+ T D P R+PRGNG G L PLEIGKG +L G+ + ++ YGS+V + A +LK +S V +ARF KPLDT+LI LA + ++T+EEG +GGFGS V L + IL Sbjct: 365 DVGIAEQHAVTMAAGMATQGMRPVAAIYSTFLQRAYDQIVHDVCIQKLPVFFCMDRAGIVGADGPTHQGMYDIAYLRCLPNMVLMAPKDEAELQRMIVTGINYTDGPIALRYPRGNGYGVALMEEG-WEPLEIGKGELLRSGEDLLLVAYGSMVYPAMQVAEILKEHGMSAAVINARFAKPLDTELILPLAKQIGRVVTLEEGCLMGGFGSAVLEALQEADIL 586
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_SYNJB (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp. GN=dxs PE=3 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 1.977e-62 Identity = 122/217 (56.22%), Postives = 150/217 (69.12%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFL 648 DVGIAEQHAVT AAG+A EG++P AIYS+FLQR YDQ++HDV +QKLPV F +DRAG+VGADGPTH G +DI ++ C+P MV+MAP DEAEL MV T P R+PRG+G+G L PL IGK +L G V IL YGS+V + AA +LK IS TV +ARF KPLDT+LI LA + +++TVEEG +GGFGS V L Sbjct: 370 DVGIAEQHAVTLAAGMACEGMRPVVAIYSTFLQRAYDQIIHDVCIQKLPVFFCLDRAGVVGADGPTHQGMYDIAYLRCIPEMVLMAPKDEAELQRMVVTGIQYTQGPIAMRYPRGSGVGVPLAEEG-WEPLPIGKAEVLRSGGEVLILAYGSMVHPSLQAAEILKEHGISATVVNARFAKPLDTELILPLAEQSRLVVTVEEGCLMGGFGSAVAEAL 585 The following BLAST results are available for this feature:
BLAST of FC931283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931283 ID=FC931283; Name=FC931283; organism=Citrus clementina; type=EST; length=677bpback to top |