FC931302

Overview
NameFC931302
Unique NameFC931302
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length725
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_PSEU2 (Adenylate kinase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=adk PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.031e-43
Identity = 86/169 (50.89%), Postives = 119/169 (70.41%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            MR+IL+G PGAGKGTQA  + EK+    ++TGDMLR+ V  +T+LG +AK +MD GGLVSD++++ +IK  L    +C NG + DGFPRT+ QAE     L+    ++ H +E+ +DD  +V R++GR VH  SGR YH IFNPPKV+  DD++GEPL+QR DD  ET+
Sbjct:    1 MRVILLGAPGAGKGTQAKFITEKFGIPQVSTGDMLRAAVKAETELGLKAKSVMDSGGLVSDDLIIGLIKDRL-AEPDCANGVLFDGFPRTIPQAE----ALLNAGLEIDHVLEIAVDDEEIVKRMSGRRVHEGSGRIYHTIFNPPKVEGIDDVTGEPLLQRKDDVEETV 164          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_CHLP8 (Adenylate kinase OS=Chlorobaculum parvum (strain NCIB 8327) GN=adk PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.031e-43
Identity = 81/169 (47.93%), Postives = 121/169 (71.60%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            MR+IL+G PGAGKGTQA  + E +    ++TGDMLR+ V  +++LG  AKK+MD+GGLV D+I++ ++K  ++ + +C NG + DGFPRT+AQA    D L     ++ + +E+ + D  ++ R++GR VHPASGR+YH +FNPP V+ KDD++GE L+QR DD  ET+
Sbjct:    1 MRVILLGAPGAGKGTQAQYISEAFDIPQISTGDMLRAAVKAQSELGMAAKKVMDEGGLVPDDIIIGLVKERIEED-DCANGCLFDGFPRTIAQA----DALRTEGIRIDNIIEIDVPDEEIIKRMSGRRVHPASGRTYHIVFNPPAVEGKDDVTGEDLVQRDDDTEETV 164          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_PROA2 (Adenylate kinase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=adk PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.959e-43
Identity = 87/169 (51.48%), Postives = 118/169 (69.82%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            MRIIL+G PGAGKGTQA  +   +    ++TGDMLR+ +  +T LG EAKK+MD G LVSDEI++ ++K  + N  +C+ G + DGFPRT+AQAE L       N  + H +E+ +D+  ++ R++GR VH ASGR+YH IFNPPK +  DDI+GEPLIQR DD  ET+
Sbjct:    1 MRIILLGAPGAGKGTQAQFISTAFNIPQISTGDMLRAAIQAQTPLGLEAKKVMDDGKLVSDEIILKLVKERI-NEPDCQQGCLFDGFPRTLAQAEALRQ----ENITINHVIEIDVDNEEIIQRMSGRRVHLASGRTYHVIFNPPKKEGVDDITGEPLIQREDDTEETV 164          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_LARHH (Adenylate kinase OS=Laribacter hongkongensis (strain HLHK9) GN=adk PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.959e-43
Identity = 89/169 (52.66%), Postives = 119/169 (70.41%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            M++IL+G PGAGKGTQA  + +K+    ++TGDMLR+ V   T LG EAKK+MD GGLVSD+I++ ++K  +   ++C NGF+ DGFPRT+ QAE +     A    L   VE+ + DS +V R++GR VH ASGR+YH  FNPPKV  KDD +GE LIQR+DDN ET+
Sbjct:    1 MKLILLGAPGAGKGTQAQFICQKFGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGGLVSDDIIIGLVKERI-AQADCANGFLFDGFPRTIPQAEAMK----AAGVNLDFVVEIDVPDSAIVERMSGRRVHVASGRTYHVKFNPPKVAGKDDETGEDLIQRADDNEETV 164          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_PECCP (Adenylate kinase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=adk PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.753e-43
Identity = 85/169 (50.30%), Postives = 121/169 (71.60%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            MRIIL+G PGAGKGTQA  + EKY    ++TGDMLR+ V   T+LGK+AK+IMD G LV+DE+++ ++K  +  + +C+NGF+LDGFPRT+ QA+ + D+ +     + + +E  + D L++ RI GR VH ASGR YH  FNPPKV+ KDD++GE L  R DD+ +T+
Sbjct:    1 MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGTELGKQAKEIMDAGKLVTDELVIALVKERIAQD-DCRNGFLLDGFPRTIPQADAMKDVGI----NVDYVIEFAVPDELIIDRIVGRRVHAASGRVYHVKFNPPKVEGKDDVTGEDLTIRKDDHEDTV 164          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_BURTA (Adenylate kinase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=adk PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.753e-43
Identity = 85/169 (50.30%), Postives = 120/169 (71.01%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            MR+IL+G PGAGKGTQA  +KEK+    ++TGDMLR+ V   T LG EAK  MD+G LV D +++ ++K  L   ++C NG++ DGFPRT+AQA+ + +  VA    + + +E+ +  S ++ R++GR  HPASGR+YH  FNPPKV+ KDD++GEPLIQR DD  ET+
Sbjct:    1 MRLILLGAPGAGKGTQANFIKEKFGIPQISTGDMLRAAVKAGTPLGVEAKAYMDEGKLVPDSLIIGLVKERL-KEADCANGYLFDGFPRTIAQADAMKEAGVA----IDYVLEIDVPFSEIIERMSGRRTHPASGRTYHVKFNPPKVEGKDDVTGEPLIQRDDDKEETV 164          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_AZOSE (Adenylate kinase OS=Azoarcus sp. (strain EbN1) GN=adk PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.753e-43
Identity = 85/169 (50.30%), Postives = 120/169 (71.01%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            MR+IL+GPPGAGKGTQA  +KEK+    ++TGDMLR+ V   T LG EAKK+MD GGLVSD+I++ ++K  L    +CK+G++ DGFPRT+ QA+ + +  V     +   +E+ + DS ++ R++GR  H ASGR+YH  +NPPKV  KDD++GE L+QR DD  ET+
Sbjct:    1 MRLILLGPPGAGKGTQANFIKEKFGIPQISTGDMLRAAVKAGTPLGVEAKKVMDAGGLVSDDIIIGLVKDRL-KEDDCKSGYMFDGFPRTIPQADAMKEAGV----PIDFVLEIDVPDSEIIERMSGRRAHLASGRTYHVKYNPPKVAGKDDLTGEDLVQRDDDREETV 164          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_ALTMD (Adenylate kinase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=adk PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.753e-43
Identity = 85/169 (50.30%), Postives = 121/169 (71.60%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            MRIIL+G PGAGKGTQA  L  KY    ++TGDMLR+ +   T+LG EAK++MD+G LVSDEI++ ++K  +  + +CK+GF+LDGFPRT+ QA+ + +  V+    + H +E  + D ++V R+ GR VHPASGR YH ++NPPKV+ KD+ +G+ LI R DD  ET+
Sbjct:    1 MRIILLGAPGAGKGTQAQFLMGKYGIPQISTGDMLRAAIKAGTELGLEAKRVMDEGKLVSDEIIIGLVKERIAQD-DCKDGFLLDGFPRTIPQADAMKEAGVS----VDHCIEFDVPDDVIVERMGGRRVHPASGRVYHVVYNPPKVEGKDNETGDDLIVRDDDKEETV 164          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_ALHEH (Adenylate kinase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=adk PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.753e-43
Identity = 86/169 (50.89%), Postives = 117/169 (69.23%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            M++IL+GPPGAGKGTQA  + E++    ++TGDMLR+ V   T LG++AKK+MD G LVSD+I++ ++K  +    +C NGF+ DGFPRT+AQAE L     A    +   VE+Q+ D  +V R+ GR VHP SGR YH   NPPK + KDD++GEPL+QR DD  ET+
Sbjct:    1 MKVILLGPPGAGKGTQAAGICERFDIPQISTGDMLRAAVKAGTPLGQQAKKVMDAGELVSDDIIMGLVKERI-AEPDCANGFLFDGFPRTIAQAEGLK----AEGINVDAVVEIQVPDEDIVQRMAGRRVHPGSGRVYHVEHNPPKEEGKDDVTGEPLVQRDDDQEETV 164          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_ACIBY (Adenylate kinase OS=Acinetobacter baumannii (strain AYE) GN=adk PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.753e-43
Identity = 83/169 (49.11%), Postives = 120/169 (71.01%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            MRIIL+GPPGAGKGTQA  + ++Y    ++TGDMLR+ + + T+LG +AK +M+ GGLVSDE+++ ++K  +    +C NG I DGFPRT+ QAE L+   ++    + H +E+ + D  +V R++GR  HPASGR YH ++NPPKV+ KDD +GE L+QR DD  ET+
Sbjct:    1 MRIILLGPPGAGKGTQAQLICKRYNIPQISTGDMLRAAIREGTELGLKAKSVMESGGLVSDELIIGLVKERI-AQPDCVNGCIFDGFPRTIPQAEALEKEGIS----IDHVIEIDVPDEEIVKRLSGRRQHPASGRVYHVVYNPPKVEGKDDETGEDLVQRPDDQEETI 164          
The following BLAST results are available for this feature:
BLAST of FC931302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_PSEU23.031e-4350.89Adenylate kinase OS=Pseudomonas syringae pv. syrin... [more]
KAD_CHLP83.031e-4347.93Adenylate kinase OS=Chlorobaculum parvum (strain N... [more]
KAD_PROA23.959e-4351.48Adenylate kinase OS=Prosthecochloris aestuarii (st... [more]
KAD_LARHH3.959e-4352.66Adenylate kinase OS=Laribacter hongkongensis (stra... [more]
KAD_PECCP6.753e-4350.30Adenylate kinase OS=Pectobacterium carotovorum sub... [more]
KAD_BURTA6.753e-4350.30Adenylate kinase OS=Burkholderia thailandensis (st... [more]
KAD_AZOSE6.753e-4350.30Adenylate kinase OS=Azoarcus sp. (strain EbN1) GN=... [more]
KAD_ALTMD6.753e-4350.30Adenylate kinase OS=Alteromonas macleodii (strain ... [more]
KAD_ALHEH6.753e-4350.89Adenylate kinase OS=Alkalilimnicola ehrlichei (str... [more]
KAD_ACIBY6.753e-4349.11Adenylate kinase OS=Acinetobacter baumannii (strai... [more]

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Properties
Property NameValue
Genbank descriptionC34103F09EF PostHarvP1 Citrus clementina cDNA clone C34103F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931302 ID=FC931302; Name=FC931302; organism=Citrus clementina; type=EST; length=725bp
GGTCTACAGTCTTTTGCTTCCACCTCTTCCCTCCTACAGTTCACAATGGC
TCCCATCACTGAAGAGGCTGTCTCCGGTCTGAAGAACGCCATCCACCAGC
TGGAGGCAAAGGTGTCCGAGCTTGAGAGCCGTCTTGCCAATGGCGGCAAG
CCCAAGTCCGCTGCCGAGCAGATGCGCATCATCCTGATGGGCCCTCCTGG
TGCAGGCAAGGGTACTCAAGCCCCGAACCTTAAGGAAAAGTACTGCGCAT
GCCACCTGGCCACCGGTGACATGCTGCGGTCTCAGGTCGCGAAGAAGACC
GATCTTGGAAAGGAAGCCAAGAAGATCATGGACCAGGGTGGTCTCGTTAG
CGATGAGATCATGGTCAACATGATCAAGAGCGAGCTCGACAACAACTCAG
AGTGCAAGAACGGTTTCATTCTGGATGGTTTCCCCCGGACGGTTGCGCAG
GCCGAGCGTCTCGATGACATGCTCGTCGCTCGTAATCAGAAGCTCCAGCA
CGCCGTTGAGCTGCAGATTGACGACTCTCTGCTGGTGGCTCGTATCACCG
GCCGCCTGGTCCACCCTGCCTCTGGCCGCTCGTACCACAAGATCTTCAAC
CCGCCCAAGGTTGACATGAAGGACGACATCTCCGGAGAGCCGCTGATCCA
GCGTTCCGATGACAATGCCGAAACCCTCACCAGCGTCTGGCTACTTACAC
GCCCAGACCACCCTGTCGTCGACTA
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