FC931303

Overview
NameFC931303
Unique NameFC931303
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length753
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931303 vs. ExPASy Swiss-Prot
Match: CISY_PIG (Citrate synthase, mitochondrial OS=Sus scrofa GN=CS PE=1 SV=2)

HSP 1 Score: 266.544 bits (680), Expect = 1.078e-70
Identity = 130/251 (51.79%), Postives = 175/251 (69.72%), Query Frame = 1
Query:    4 DLHSQLQEMIPEQQERLKKVKSELGKAQLGNITVDMVIGGMRGMTGLLWETSLLDPDEGIRFRGLSIPECQKLLPAAKPDXXXXXXXXXXXXXTGKVPSKEQVDGLPKELRDRATVPDYVYKVIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDS-LDYGGNFSHMLGFDDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASAL 753
            +L   L ++IP++Q R+K  + + G   +G ITVDM+ GGMRGM GL++ETS+LDPDEGIRFRG SIPECQK+LP AK               TG++P++EQV  L KE   RA +P +V  ++D  P   HPM+Q ++ + AL  +S F  AY +GIH++KYWE  YED ++LIA++P VAA +Y+ +Y++G  I   DS LD+  NF++MLG+ D +  ELMRLY+TIHSDHEGGNVSAHT HLV SAL
Sbjct:   32 NLKDILADLIPKEQARIKTFRQQHGNTVVGQITVDMMYGGMRGMKGLVYETSVLDPDEGIRFRGYSIPECQKMLPKAKGGEEPLPEGLFWLLVTGQIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAITALNSESNFARAYAEGIHRTKYWELIYEDCMDLIAKLPCVAAKIYRNLYREGSSIGAIDSKLDWSHNFTNMLGYTDAQFTELMRLYLTIHSDHEGGNVSAHTSHLVGSAL 282          
BLAST of FC931303 vs. ExPASy Swiss-Prot
Match: CISY_BOVIN (Citrate synthase, mitochondrial OS=Bos taurus GN=CS PE=2 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.409e-70
Identity = 131/251 (52.19%), Postives = 176/251 (70.12%), Query Frame = 1
Query:    4 DLHSQLQEMIPEQQERLKKVKSELGKAQLGNITVDMVIGGMRGMTGLLWETSLLDPDEGIRFRGLSIPECQKLLPAAKPDXXXXXXXXXXXXXTGKVPSKEQVDGLPKELRDRATVPDYVYKVIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPK-DDSLDYGGNFSHMLGFDDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASAL 753
            +L   L ++IP++Q R+K  + + GK  +G ITVDM+ GGMRGM GL++ETS+LDPDEGIRFRG SIPECQKLLP AK               TG++P++EQV  L +E   RA +P +V  ++D  P   HPM+Q ++ V AL  +S F  AY +GI+++KYWE  YEDS++LIA++P VAA +Y+ +Y++G  I   D  LD+  NF++MLG+ D +  ELMRLY+TIHSDHEGGNVSAHT HLV SAL
Sbjct:   32 NLKDILADLIPKEQTRVKAFRQQHGKTVVGQITVDMMYGGMRGMKGLVYETSVLDPDEGIRFRGYSIPECQKLLPKAKGGEEPLPEGLFWLLVTGQIPTEEQVSWLSQEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNSESTFARAYSEGINRTKYWELIYEDSMDLIAKLPCVAAKIYRNLYREGSSIGAIDPKLDWSHNFTNMLGYTDAQFTELMRLYLTIHSDHEGGNVSAHTSHLVGSAL 282          
BLAST of FC931303 vs. ExPASy Swiss-Prot
Match: CISY_AMBCR (Citrate synthase, mitochondrial OS=Amblyrhynchus cristatus GN=CS PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.840e-70
Identity = 129/251 (51.39%), Postives = 175/251 (69.72%), Query Frame = 1
Query:    4 DLHSQLQEMIPEQQERLKKVKSELGKAQLGNITVDMVIGGMRGMTGLLWETSLLDPDEGIRFRGLSIPECQKLLPAAKPDXXXXXXXXXXXXXTGKVPSKEQVDGLPKELRDRATVPDYVYKVIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPK-DDSLDYGGNFSHMLGFDDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASAL 753
            +L   L  MIP++Q R+K  + + G   +G ITVDM+ GGMRGM GL++ETS+LDPDEGIRFRG SIPECQKLLP A                TG++PS+EQV+ + +E   RA +P +V  ++D  P   HPM+Q ++ V AL  +S F  AY +GI ++KYWE  YEDS++LIA++P +AA +Y+ +Y++G  I   D +LD+  NF++MLG+ D + +ELMRLY+TIHSDHEGGNVSAHT HLV SAL
Sbjct:   35 NLKDVLANMIPKEQARIKSFRQQYGSTVIGQITVDMLYGGMRGMKGLIYETSVLDPDEGIRFRGYSIPECQKLLPKAPGGAEPLPEGLFWLLVTGEIPSQEQVNWVSREWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNSESTFARAYSEGISRTKYWEFIYEDSMDLIAKLPCIAAKIYRNLYREGSSIGAIDPALDWSHNFTNMLGYTDTQFIELMRLYLTIHSDHEGGNVSAHTSHLVGSAL 285          
BLAST of FC931303 vs. ExPASy Swiss-Prot
Match: CISY_GLOMM (Probable citrate synthase, mitochondrial OS=Glossina morsitans morsitans PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 4.098e-70
Identity = 134/250 (53.60%), Postives = 171/250 (68.40%), Query Frame = 1
Query:    7 LHSQLQEMIPEQQERLKKVKSELGKAQLGNITVDMVIGGMRGMTGLLWETSLLDPDEGIRFRGLSIPECQKLLPAAKPDXXXXXXXXXXXXXTGKVPSKEQVDGLPKELRDRATVPDYVYKVIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPK-DDSLDYGGNFSHMLGFDDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASAL 753
            L   L   IP +QER+K  + + G  ++G  TVDM+ GGMRG+  L+ ETS+LD DEGIRFRGLSIPECQK+LPAA                TG+VPSK QV  + +E   RA +P +V  +++  P + HPM+QF++ + AL   S+F +AY  G+HKSKYWE  YEDS++LIA++PVVAA +Y   Y++GK     D SLD+  NF  MLG+DDPK  ELMRLY+TIHSDHEGGNVSAHT HLV SAL
Sbjct:   35 LRDVLAAKIPAEQERVKNFRKQHGSFKMGETTVDMMYGGMRGIKALVTETSVLDADEGIRFRGLSIPECQKVLPAADGGEEPLPEGLFWLLLTGEVPSKAQVKQVSREWAARAALPQHVVTMLNNFPTSLHPMSQFSAAITALNHDSKFAKAYSDGVHKSKYWEHVYEDSMDLIAKLPVVAATIYCNTYRNGKGSKSIDSSLDWSANFVKMLGYDDPKFTELMRLYLTIHSDHEGGNVSAHTVHLVGSAL 284          
BLAST of FC931303 vs. ExPASy Swiss-Prot
Match: CISY_HUMAN (Citrate synthase, mitochondrial OS=Homo sapiens GN=CS PE=1 SV=2)

HSP 1 Score: 264.233 bits (674), Expect = 5.352e-70
Identity = 131/251 (52.19%), Postives = 174/251 (69.32%), Query Frame = 1
Query:    4 DLHSQLQEMIPEQQERLKKVKSELGKAQLGNITVDMVIGGMRGMTGLLWETSLLDPDEGIRFRGLSIPECQKLLPAAKPDXXXXXXXXXXXXXTGKVPSKEQVDGLPKELRDRATVPDYVYKVIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPK-DDSLDYGGNFSHMLGFDDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASAL 753
            +L   L ++IP++Q R+K  + + GK  +G ITVDM+ GGMRGM GL++ETS+LDPDEGIRFRG SIPECQKLLP AK               TG +P++EQV  L KE   RA +P +V  ++D  P   HPM+Q ++ V AL  +S F  AY +GI ++KYWE  YEDS++LIA++P VAA +Y+ +Y++G  I   D +LD+  NF++MLG+ D +  EL RLY+TIHSDHEGGNVSAHT HLV SAL
Sbjct:   32 NLKDILADLIPKEQARIKTFRQQHGKTVVGQITVDMMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEGLFWLLVTGHIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNSESNFARAYAQGISRTKYWELIYEDSMDLIAKLPCVAAKIYRNLYREGSGIGAIDSNLDWSHNFTNMLGYTDHQFTELTRLYLTIHSDHEGGNVSAHTSHLVGSAL 282          
BLAST of FC931303 vs. ExPASy Swiss-Prot
Match: CISY_DROME (Probable citrate synthase, mitochondrial OS=Drosophila melanogaster GN=kdn PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.557e-69
Identity = 132/250 (52.80%), Postives = 171/250 (68.40%), Query Frame = 1
Query:    7 LHSQLQEMIPEQQERLKKVKSELGKAQLGNITVDMVIGGMRGMTGLLWETSLLDPDEGIRFRGLSIPECQKLLPAAKPDXXXXXXXXXXXXXTGKVPSKEQVDGLPKELRDRATVPDYVYKVIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPK-DDSLDYGGNFSHMLGFDDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASAL 753
            L   L   +P++QER+K  + + G  ++G  T+DM+ GGMRG+  L+ ETS+LD DEGIRFRGLSIPECQK+LPAA                TG+VP+K QV  L +E  +RA +P +V  +++ +P T HPM+QFA+ V AL   S+F +AY  G+HKSKYWE  YEDS++LIA++PVVAA +Y   Y+ GK     D SLD+  NF  MLG+D+    ELMRLY+TIHSDHEGGNVSAHT HLV SAL
Sbjct:   34 LRDVLAAKVPQEQERVKNFRKQHGATKMGETTIDMMYGGMRGIKALVTETSVLDADEGIRFRGLSIPECQKVLPAADGGTEPLPEGLFWLLLTGEVPTKSQVQQLSREWAERAALPQHVVTMLNNMPTTLHPMSQFAAAVTALNHDSKFAKAYSDGVHKSKYWEYVYEDSMDLIAKLPVVAATIYCNTYRGGKGSRSIDSSLDWSANFVKMLGYDNAPFTELMRLYLTIHSDHEGGNVSAHTVHLVGSAL 283          
BLAST of FC931303 vs. ExPASy Swiss-Prot
Match: CISY_RAT (Citrate synthase, mitochondrial OS=Rattus norvegicus GN=Cs PE=1 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 7.729e-69
Identity = 128/251 (51.00%), Postives = 175/251 (69.72%), Query Frame = 1
Query:    4 DLHSQLQEMIPEQQERLKKVKSELGKAQLGNITVDMVIGGMRGMTGLLWETSLLDPDEGIRFRGLSIPECQKLLPAAKPDXXXXXXXXXXXXXTGKVPSKEQVDGLPKELRDRATVPDYVYKVIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDS-LDYGGNFSHMLGFDDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASAL 753
            +L   L  +IP++Q R+K  + + GK  +G ITVDM+ GGMRGM GL++ETS+LDPDEGIRFRG SIPECQKLLP AK               TG++P++EQV  L +E   RA +P +V  ++D  P   HPM+Q ++ + AL  +S F  AY +GI+++KYWE  YED ++LIA++P VAA +Y+ +Y++G  I   DS LD+  NF++ML + +P+  ELMRLY+TIHSDH+GGNVSAHT HLV SAL
Sbjct:   32 NLKDILSNLIPKEQARVKTFRQQHGKTVVGQITVDMMYGGMRGMKGLVYETSVLDPDEGIRFRGYSIPECQKLLPKAKGGEEPLPEGLFWLLVTGQMPTEEQVSWLSQEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAITALNSESNFARAYAEGINRTKYWELIYEDCMDLIAKLPCVAAKIYRNLYREGSSIGAIDSKLDWSHNFTNMLCYTEPQFTELMRLYLTIHSDHDGGNVSAHTSHLVGSAL 282          
BLAST of FC931303 vs. ExPASy Swiss-Prot
Match: CISY_CHICK (Citrate synthase, mitochondrial OS=Gallus gallus GN=CS PE=1 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.612e-66
Identity = 127/251 (50.60%), Postives = 167/251 (66.53%), Query Frame = 1
Query:    4 DLHSQLQEMIPEQQERLKKVKSELGKAQLGNITVDMVIGGMRGMTGLLWETSLLDPDEGIRFRGLSIPECQKLLPAAKPDXXXXXXXXXXXXXTGKVPSKEQVDGLPKELRDRATVPDYVYKVIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDS-LDYGGNFSHMLGFDDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASAL 753
            +L   L  +IP++Q R+K  + + G   LG ITVDM  GGMRGM GL++ETS+LDPDEGIRFRG SIPECQKLLP                  TG++P+  QV  L KE   RA +P +V  ++D  P   HPM+Q ++ + AL  +S F  AY +GI ++KYWE  YE +++LIA++P VAA +Y+ +Y+ G  I   DS LD+  NF++MLG+ D +  ELMRLY+TIHSDHEGGNVSAHT HLV SAL
Sbjct:    5 NLKDVLAALIPKEQARIKTFRQQHGGTALGQITVDMSYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKGGXGGEPLPEGLFWLLVTGQIPTGAQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAITALNSESNFARAYAEGILRTKYWEMVYESAMDLIAKLPCVAAKIYRNLYRAGSSIGAIDSKLDWSHNFTNMLGYTDAQFTELMRLYLTIHSDHEGGNVSAHTSHLVGSAL 255          
BLAST of FC931303 vs. ExPASy Swiss-Prot
Match: CISY1_YEAST (Citrate synthase, mitochondrial OS=Saccharomyces cerevisiae GN=CIT1 PE=1 SV=2)

HSP 1 Score: 251.521 bits (641), Expect = 3.590e-66
Identity = 116/249 (46.59%), Postives = 171/249 (68.67%), Query Frame = 1
Query:    7 LHSQLQEMIPEQQERLKKVKSELGKAQLGNITVDMVIGGMRGMTGLLWETSLLDPDEGIRFRGLSIPECQKLLPAAKPDXXXXXXXXXXXXXTGKVPSKEQVDGLPKELRDRATVPDYVYKVIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFDDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASAL 753
            L  +  E+IP + E +KK K E GK  +G + ++   GGMRG+ GL+WE S+LDP+EGIRFRG +IPE Q+ LP A+               TG++P+  QV  L  +L  R+ +P++V +++D+LP   HPM QF+  V AL+ +S+F +AY +G+ K +YW  T+EDSL+L+ ++PV+A+ +Y+ ++KDGKI   D + DYG N + +LG+++   ++LMRLY+TIHSDHEGGNVSAHT HLV SAL
Sbjct:   45 LKERFAEIIPAKAEEIKKFKKEHGKTVIGEVLLEQAYGGMRGIKGLVWEGSVLDPEEGIRFRGRTIPEIQRELPKAEGSTEPLPEALFWLLLTGEIPTDAQVKALSADLAARSEIPEHVIQLLDSLPKDLHPMAQFSIAVTALESESKFAKAYAQGVSKKEYWSYTFEDSLDLLGKLPVIASKIYRNVFKDGKITSTDPNADYGKNLAQLLGYENKDFIDLMRLYLTIHSDHEGGNVSAHTTHLVGSAL 293          
BLAST of FC931303 vs. ExPASy Swiss-Prot
Match: CISY_CAEEL (Probable citrate synthase, mitochondrial OS=Caenorhabditis elegans GN=cts-1 PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 7.998e-66
Identity = 122/251 (48.61%), Postives = 163/251 (64.94%), Query Frame = 1
Query:    4 DLHSQLQEMIPEQQERLKKVKSELGKAQLGNITVDMVIGGMRGMTGLLWETSLLDPDEGIRFRGLSIPECQKLLPAAKPDXXXXXXXXXXXXXTGKVPSKEQVDGLPKELRDRATVPDYVYKVIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPK-DDSLDYGGNFSHMLGFDDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASAL 753
            +L   L + IP    ++K  ++E G   + N+ +DM+ GGMR M G++ ETS+LDP+EGIRFRG SIPECQKLLP AK               TG VPS+ Q   + KE   RA +P +V +++D  P   HPM QF + + AL  +S+F  AY +G+ K+ YWE  YEDS++L+A++P VAA +Y+ +Y+DG  +   D   D+  NFS MLG+DDP   ELMRLY+ IHSDHEGGNVSAHT HLV SAL
Sbjct:   34 NLKEVLSKKIPAHNAKVKSFRTEHGSTVVQNVNIDMIYGGMRSMKGMVTETSVLDPEEGIRFRGYSIPECQKLLPKAKGGEEPLPEAIWWLLCTGDVPSEAQTAAITKEWNARADLPTHVVRMLDNFPDNLHPMAQFIAAIAALNNESKFAGAYARGVAKASYWEYAYEDSMDLLAKLPTVAAIIYRNLYRDGSAVSVIDPKKDWSANFSSMLGYDDPLFAELMRLYLVIHSDHEGGNVSAHTSHLVGSAL 284          
The following BLAST results are available for this feature:
BLAST of FC931303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
CISY_PIG1.078e-7051.79Citrate synthase, mitochondrial OS=Sus scrofa GN=C... [more]
CISY_BOVIN1.409e-7052.19Citrate synthase, mitochondrial OS=Bos taurus GN=C... [more]
CISY_AMBCR1.840e-7051.39Citrate synthase, mitochondrial OS=Amblyrhynchus c... [more]
CISY_GLOMM4.098e-7053.60Probable citrate synthase, mitochondrial OS=Glossi... [more]
CISY_HUMAN5.352e-7052.19Citrate synthase, mitochondrial OS=Homo sapiens GN... [more]
CISY_DROME1.557e-6952.80Probable citrate synthase, mitochondrial OS=Drosop... [more]
CISY_RAT7.729e-6951.00Citrate synthase, mitochondrial OS=Rattus norvegic... [more]
CISY_CHICK1.612e-6650.60Citrate synthase, mitochondrial OS=Gallus gallus G... [more]
CISY1_YEAST3.590e-6646.59Citrate synthase, mitochondrial OS=Saccharomyces c... [more]
CISY_CAEEL7.998e-6648.61Probable citrate synthase, mitochondrial OS=Caenor... [more]

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Properties
Property NameValue
Genbank descriptionC34103F10EF PostHarvP1 Citrus clementina cDNA clone C34103F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931303 ID=FC931303; Name=FC931303; organism=Citrus clementina; type=EST; length=753bp
CTTGACCTTCATTCTCAGCTCCAGGAAATGATTCCAGAACAACAGGAGCG
CCTGAAGAAAGTGAAGTCAGAACTTGGAAAAGCCCAGCTGGGAAATATTA
CCGTTGACATGGTAATCGGCGGGATGAGAGGAATGACTGGCTTACTTTGG
GAAACCTCATTACTTGACCCTGATGAGGGAATTCGCTTTCGGGGTCTGTC
TATTCCTGAGTGCCAGAAGTTGTTACCTGCCGCTAAGCCAGATGGAGAAC
CTTTGCCTGAGGGTCTTCTTTGGCTTCTTTTAACTGGAAAGGTACCGAGC
AAAGAGCAGGTCGATGGCTTGCCCAAGGAATTGAGAGATCGTGCCACTGT
CCCAGATTATGTGTACAAGGTCATTGATGCTCTACCTGTAACGGCACATC
CGATGACTCAGTTTGCTAGTGGGGTCATGGCTCTGCAGGTGCAAAGTGAA
TTTCAGGAGGCTTATGAGAAGGGAATTCATAAATCAAAGTACTGGGAACC
AACATATGAGGATTCTCTTAATTTGATTGCTCGTGTGCCGGTAGTAGCTG
CGTACGTTTATCAAAGGATATACAAGGATGGAAAGATTATTCCCAAGGAT
GACTCACTGGATTATGGTGGGAACTTCTCGCACATGTTGGGATTCGATGA
TCCTAAGATGCTAGAGCTTATGAGGCTTTATGTTACCATTCACAGTGACC
ACGAAGGTGGAAATGTCAGTGCTCACACCGGCCATCTAGTTGCAAGTGCA
CTT
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