FC931307

Overview
NameFC931307
Unique NameFC931307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_BURCH (Chaperone protein htpG OS=Burkholderia cenocepacia (strain HI2424) GN=htpG PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.092e-28
Identity = 73/210 (34.76%), Postives = 119/210 (56.67%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE-SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            +F + LK G+ ED  N+ ++A+LLR+ ST    +    SL DYV+RMK  Q+ IYY+T ++ +A +NSP LE  +KKG EVL + D +DE+ +  L EF+GK L S  +  L L E +++EKK +E   E  + + + +K+ LG               P CLV  +   +  ++R++KA      +M      +  +EINPE+ ++++L
Sbjct:  384 AFGQVLKEGLGEDHANRERIAKLLRFASTHGDTDAQDVSLADYVSRMKPEQSKIYYVTADTWQAAKNSPHLEVFRKKGVEVLLLTDRVDEWMLSFLHEFDGKPLASVARGDLDLGELNDEEKKAQEQAGEAIKPVVEKMKEALGDKVKEVRVTFRLTDSPSCLVADDNDMSGYLQRMLKAAGQNAPAM------QPILEINPEHALVKQL 587          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_BURCA (Chaperone protein htpG OS=Burkholderia cenocepacia (strain AU 1054) GN=htpG PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.092e-28
Identity = 73/210 (34.76%), Postives = 119/210 (56.67%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE-SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            +F + LK G+ ED  N+ ++A+LLR+ ST    +    SL DYV+RMK  Q+ IYY+T ++ +A +NSP LE  +KKG EVL + D +DE+ +  L EF+GK L S  +  L L E +++EKK +E   E  + + + +K+ LG               P CLV  +   +  ++R++KA      +M      +  +EINPE+ ++++L
Sbjct:  384 AFGQVLKEGLGEDHANRERIAKLLRFASTHGDTDAQDVSLADYVSRMKPEQSKIYYVTADTWQAAKNSPHLEVFRKKGVEVLLLTDRVDEWMLSFLHEFDGKPLASVARGDLDLGELNDEEKKAQEQAGEAIKPVVEKMKEALGDKVKEVRVTFRLTDSPSCLVADDNDMSGYLQRMLKAAGQNAPAM------QPILEINPEHALVKQL 587          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_VIBF1 (Chaperone protein htpG OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=htpG PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.733e-28
Identity = 78/218 (35.78%), Postives = 120/218 (55.05%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDE---KKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 643
            F + LK G+ ED  NK K+A LLR+ +T+  S ++   L  YV RMKE Q+ I+Y+T +S  A +NSP LE+ K KG EV+ M D IDE+ +  L EF+GK+  S TK GL L + EDE   +K KET +E+F+ + +  K  LG               P  +VT ++     M ++++A       +      K   EINP++ +++++   AD +
Sbjct:  384 FGQVLKEGLAEDLANKEKIAGLLRFATTEKDSSEQALGLAGYVERMKEEQDKIFYLTADSYAAAKNSPHLEQFKAKGIEVVLMYDRIDEWLMSYLTEFDGKQFQSITKAGLDLSKFEDEAEKEKHKET-EEEFKSVVERTKSYLGDRVKEVRTTFKLATTPAVVVTDDFEMGTQMAKLLEAAGQAAPEV------KYIFEINPDHALVKQMADEADEE 594          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_MYCUA (Chaperone protein htpG OS=Mycobacterium ulcerans (strain Agy99) GN=htpG PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.661e-28
Identity = 76/222 (34.23%), Postives = 118/222 (53.15%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD-ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKD 667
            F K +K G+  D  N+  L E+  + ST S +E T+L  YV RMKE Q  I++ TG+S++ +  SP LE  + KGYEVL + + +DE  VG + EF+GK L S  K  + LD + E  +  +E  +++F  L   +K+ LG               P CL+T  +G T  + RI +A              K+T+E+NP +P++  LR +A A  +D + K+
Sbjct:  395 FGKVVKEGLLADFDNRETLLEISSFASTHSEEEPTTLAGYVERMKEDQTQIFFATGDSRQQILKSPHLEAFRAKGYEVLLLTEPVDEVWVGVVNEFDGKPLQSVAKGEVDLDSDGEGSEAEREEQQKEFADLLGWLKETLGEQVKEVRLSTRLTESPACLITDTFGITPALARIYRATG------QDVPVGKRTLELNPTHPLVIGLR-QAQASADDDAKKE 609          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_TREDE (Chaperone protein htpG OS=Treponema denticola GN=htpG PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.088e-28
Identity = 73/217 (33.64%), Postives = 122/217 (56.22%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTK---SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD-ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 643
            F++ LK G++ D  ++ +LA+L+R+ +T      DE TS  DYV+RMK  Q  IYYITGE +K +  SP LE  K+KG+EVL M D ID+  +  L +++  +L +A + G   +  +E+E K  E  ++ F+ + + IK+VLG               P C+V  E   +  MER+M+A    + S     + K  +E+N ++P++++L+   D +
Sbjct:  390 FNRPLKEGLYSDYEHREELADLVRFKTTSPEVKEDEWTSFADYVSRMKSDQKAIYYITGEDEKTLRQSPHLEVYKQKGFEVLIMPDEIDDIIIPSLGKYKDWELKAANRAGSDKELNTEEETKEAEKKEKDFKPVLEKIKEVLGDKVKEVRFSKRLSDSPSCIVVDETDPSLQMERMMRAMGQFNTS-----AVKPILEVNADHPLVQKLKDSKDKE 601          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_MYCGI (Chaperone protein htpG OS=Mycobacterium gilvum (strain PYR-GCK) GN=htpG PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.088e-28
Identity = 76/212 (35.85%), Postives = 115/212 (54.25%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKE----KFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRK 628
            F + LK G+  D+ N+  L  +  + ST+S DE T+L +YV RM EGQ  I+Y  GES++ + NSP LE  K KGYEVL + D +DE  V  + EF+GK L S  K  + LD SE +K+ +ET ++    +F  +   + +VLG               P CL+T  +G T  + R+ +A      S       K+ +E+NP +P++  LR+
Sbjct:  395 FGRVLKEGLLSDTDNQETLLRVSSFASTRSDDEPTTLAEYVERMPEGQTQIFYAAGESRQQLLNSPHLEAFKAKGYEVLLLTDPVDEVWVESIHEFDGKPLQSVAKGEVDLD-SEADKEAQETERQQREKEFADVIAWLTEVLGDHVKEVRLSTRLTDSPACLITDTFGITPALARMYRA------SGQPVPVEKRILELNPTHPLVVGLRE 599          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_BURTA (Chaperone protein htpG OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=htpG PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.088e-28
Identity = 73/211 (34.60%), Postives = 115/211 (54.50%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE-SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELR 625
            +F + LK G+ ED  N+ ++A+LLR+ ST    +    +L DYV RMK  Q  IYY+T ++ +A +NSP LE  +KKG EVL + D +DE+ +  L EF+GK L S  +  L L   ++DEKK +E   E  + +   +K+ LG               P CLV  +   +  ++R++KA      S       +  +EINPE+P+++ L+
Sbjct:  384 AFGQVLKEGVGEDHANRERVAKLLRFASTHGDTDAQDVALADYVARMKPEQTKIYYVTADTWQAAKNSPHLEVFRKKGVEVLLLTDRVDEWMLSFLHEFDGKPLASVARGDLDLGALNDDEKKAQEETGEAMKPVVDKMKETLGGKVKDVRVTFRLTDSPSCLVADDNDMSGYLQRMLKAAGQNAPSF------QPILEINPEHPLVKALK 588          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_BURP6 (Chaperone protein htpG OS=Burkholderia pseudomallei (strain 668) GN=htpG PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.088e-28
Identity = 74/211 (35.07%), Postives = 115/211 (54.50%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE-SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELR 625
            +F + LK GI ED  N+ ++A+LLR+ ST    +    +L DYV RMK  Q  IYY+T ++ +A +NSP LE  +KKG EVL + D +DE+ +  L EF+GK L S  +  L L   ++DEKK +E   E  + +   +K+ LG               P CLV  +   +  ++R++KA            S +  +EINPE+P+++ L+
Sbjct:  384 AFGQVLKEGIGEDHANRERVAKLLRFASTHGDTDAQDVALADYVARMKPEQTKIYYVTADTWQAAKNSPHLEVFRKKGVEVLLLTDRVDEWMLSFLHEFDGKPLASVARGDLDLGALNDDEKKAQEETGEAMKPVVDKMKETLGEKVKDVRVTFRLTDSPSCLVADDNDMSGYLQRMLKAAG------QSAPSFQPILEINPEHPLVKALK 588          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_MYCTU (Chaperone protein htpG OS=Mycobacterium tuberculosis GN=htpG PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.951e-28
Identity = 76/221 (34.39%), Postives = 116/221 (52.49%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKM-KETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVK 664
            F + LK G+  D  N+  L  +  + ST S +E T+L +YV RMK+GQ  I+Y TGE+++ +  SP LE  K KGYEVL + D +DE  VG + EF+GK L S  K  + L   ED  +  +E  +++F  L   +++ L                P CL+T  +G T  + RI +A      S       K+ +E+NP +P++  LR +A  D+ D + K
Sbjct:  395 FGRVLKEGLLSDIDNRETLLGISSFVSTYSEEEPTTLAEYVERMKDGQQQIFYATGETRQQLLKSPHLEAFKAKGYEVLLLTDPVDEVWVGMVPEFDGKPLQSVAKGEVDLSSEEDTSEAEREERQKEFADLLTWLQETLSDHVKEVRLSTRLTESPACLITDAFGMTPALARIYRA------SGQEVPVGKRILELNPSHPLVTGLR-QAHQDRADDAEK 608          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_MYCTA (Chaperone protein htpG OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=htpG PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.951e-28
Identity = 76/221 (34.39%), Postives = 116/221 (52.49%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKM-KETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVK 664
            F + LK G+  D  N+  L  +  + ST S +E T+L +YV RMK+GQ  I+Y TGE+++ +  SP LE  K KGYEVL + D +DE  VG + EF+GK L S  K  + L   ED  +  +E  +++F  L   +++ L                P CL+T  +G T  + RI +A      S       K+ +E+NP +P++  LR +A  D+ D + K
Sbjct:  395 FGRVLKEGLLSDIDNRETLLGISSFVSTYSEEEPTTLAEYVERMKDGQQQIFYATGETRQQLLKSPHLEAFKAKGYEVLLLTDPVDEVWVGMVPEFDGKPLQSVAKGEVDLSSEEDTSEAEREERQKEFADLLTWLQETLSDHVKEVRLSTRLTESPACLITDAFGMTPALARIYRA------SGQEVPVGKRILELNPSHPLVTGLR-QAHQDRADDAEK 608          
The following BLAST results are available for this feature:
BLAST of FC931307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HTPG_BURCH2.092e-2834.76Chaperone protein htpG OS=Burkholderia cenocepacia... [more]
HTPG_BURCA2.092e-2834.76Chaperone protein htpG OS=Burkholderia cenocepacia... [more]
HTPG_VIBF12.733e-2835.78Chaperone protein htpG OS=Vibrio fischeri (strain ... [more]
HTPG_MYCUA4.661e-2834.23Chaperone protein htpG OS=Mycobacterium ulcerans (... [more]
HTPG_TREDE6.088e-2833.64Chaperone protein htpG OS=Treponema denticola GN=h... [more]
HTPG_MYCGI6.088e-2835.85Chaperone protein htpG OS=Mycobacterium gilvum (st... [more]
HTPG_BURTA6.088e-2834.60Chaperone protein htpG OS=Burkholderia thailandens... [more]
HTPG_BURP66.088e-2835.07Chaperone protein htpG OS=Burkholderia pseudomalle... [more]
HTPG_MYCTU7.951e-2834.39Chaperone protein htpG OS=Mycobacterium tuberculos... [more]
HTPG_MYCTA7.951e-2834.39Chaperone protein htpG OS=Mycobacterium tuberculos... [more]

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Properties
Property NameValue
Genbank descriptionC34103G02EF PostHarvP1 Citrus clementina cDNA clone C34103G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931307 ID=FC931307; Name=FC931307; organism=Citrus clementina; type=EST; length=721bp
GTCATTCTCTAAGAACCTAAAGCTTGGTATCCACGAGGACTCCACCAACA
AGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGAT
GAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAAGGCCAGAA
TGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCC
CATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTT
GATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAA
GAAGCTTGTCTCAGCGACCAAAGAAGGTCTCAAGCTTGATGAGAGTGAAG
ATGAGAAGAAGATGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGC
AAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTC
TGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATGGAT
GGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGACAAC
AGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGATCAATCCGGA
GAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATGCGGACAAGAATG
ACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAGACTGCTCTCCTC
ACTTCTGGTTNCAGCCTTGAT
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