FC931307

Overview
NameFC931307
Unique NameFC931307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15313 contig Ccv1_Contig15313:26..746. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_PSEHT (Chaperone protein htpG OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=htpG PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.771e-27
Identity = 74/218 (33.94%), Postives = 116/218 (53.21%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDE--KKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            F + +K G  ED+ NK  + +LLR+ ST   S  +  SL+ YV RM EGQ  IYY+  ++  A +NSP LE  +KKG EVL + D +DE+ +  L EF  K+L S T+  L L + +DE  KK +E  +++  GL + IK  LG               P C+V+ +   ++ M+++M++             +K   E+NPE+ +++ L    D DK
Sbjct:  387 FGQVIKEGPAEDAANKEAICKLLRFSSTHTDSATQDVSLEQYVERMNEGQEKIYYVVADTFTAAKNSPHLEIFRKKGIEVLLLSDRVDEWMMSHLTEFADKQLQSITRGDLDLGKLDDEETKKAQEESEKEVAGLVERIKTALGDEVKEVRFTHRLTDSPACVVSDDNDMSSQMQKLMESVG------QAAPEAKPVFELNPEHQLVKHLNDEQDEDK 598          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_DESPS (Chaperone protein htpG OS=Desulfotalea psychrophila GN=htpG PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.771e-27
Identity = 79/224 (35.27%), Postives = 123/224 (54.91%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL---TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKM-------KETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 643
            +F   LK G+  D   + +L +LLR+ ++KS  EL    SL DY+ RM   Q  IYYI G S+ A+E  P++E  KKK  E++Y +D ID++ +  L+EFEGKKLVSA    + LD+ E E  +       K  L E    + + +KD +G               P  +V  +   +A+MER++ A + ++  +AG   SKK +EIN +NP++++L +   AD
Sbjct:  363 TFGIYLKEGVTTDYEYQKELGKLLRFETSKS--ELGVPVSLADYLLRMNPDQEKIYYINGASRAAIEAGPYVEMFKKKDIEIVYTLDPIDDFVLSHLQEFEGKKLVSADGADISLDKEEAEDALVDESGVDKAELAELLTWMKEELKDEVG----DVLSSHRLVDAPAMIVNADGFMSASMERVL-AASRKEQGIAGVDGSKKHLEINGKNPLIKQLAELRKAD 579          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_VESOH (Chaperone protein htpG OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=htpG PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.313e-27
Identity = 73/217 (33.64%), Postives = 120/217 (55.30%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKA--QALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 643
            F   +K G+ ED+ NK K+A+LLR+ + KS +  +  +L+ Y+  +++ Q  IYYIT E+ +  + SP LE   +K  EVL + D +DE+ V   +EF+G +L S  K  L+  +S++EKK KE + + FE + + ++ +L                P CLV  E     NMERIMK+  Q + D        +K  +EINP + ++++L+ + D D
Sbjct:  376 FGMLMKEGVVEDTINKDKIAKLLRFTTNKSKNATQTVTLEHYIKNIQKDQKAIYYITAETYETAKGSPHLENFNQKNIEVLLLSDRVDEWMVSNFREFDGIQLKSIAKGNLEDFDSKEEKKAKEEVAKNFEIVIEKMQKILDSQVKEIKISSRLSESPSCLVADENEMGGNMERIMKSLGQDIPD--------TKPILEINPTHSLVKKLKTKIDED 584          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_RUTMC (Chaperone protein htpG OS=Ruthia magnifica subsp. Calyptogena magnifica GN=htpG PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.313e-27
Identity = 75/215 (34.88%), Postives = 115/215 (53.49%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 643
            F   +K G+ ED  NK K+A+LLR+ + KS    +  +L+ YV  M++ Q  IYYIT E+ +A + SP LE   +K  EVL + D +DE+ V    +FE   L S TK  L+  +S++EKK KE + + FE + + ++ +L                P CLV  E     NMERIMK+             +K  +EINP +P++++L+ + D D
Sbjct:  376 FGMVMKEGVVEDFANKDKIAKLLRFTTNKSESAAQTATLECYVKSMQKDQKAIYYITAETYEAAKGSPHLEIFNQKDIEVLLLSDRVDEWMVNNFGKFEDVPLKSITKGDLEGLDSKEEKKAKEEVSKNFEKVIEKMQKILDTQVKEIKVSSRLSDSPSCLVVDENEMGGNMERIMKSLG------QDVPDTKPILEINPNHPLVKKLKTKIDED 584          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HSP82_ENCCU (Heat shock protein 90 OS=Encephalitozoon cuniculi GN=HSP90 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.313e-27
Identity = 78/220 (35.45%), Postives = 121/220 (55.00%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTK-LAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMS--SKKTMEINPENPIMEELRKRADADKNDK 655
            F   LK+ I E S  +    A+ LRY +TKSG+E  SL  YV RM   Q  IY ITG SK+ V+++P L+  +K  YEV+YM + +DE  +  LK+++G  +   T EG++L   EDE   +E +K  FE  CK +KD+L                P  + T +Y  +  ME IMK+Q + + +    M+  SKK  E+NP + +++ L+   D+++ +K
Sbjct:  427 FGNCLKMAIGEASEGQQDGYAKCLRYFTTKSGEEAISLDTYVERMAPNQKQIYVITGLSKEQVKSNPALDAFQK--YEVIYMHEVMDEVMLRGLKKYKGHTIQRITSEGVEL--PEDEASNEEVVK-SFEEFCKKVKDILSSKVEKVTVNPRLVSVPAVISTTKYSLSGTMENIMKSQPVTEANPFAAMTAVSKKIFEMNPNHQLVKNLKALFDSNEIEK 641          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_VEREI (Chaperone protein htpG OS=Verminephrobacter eiseniae (strain EF01-2) GN=htpG PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.021e-27
Identity = 77/210 (36.67%), Postives = 107/210 (50.95%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESED--EKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMS--SKKTMEINPENPIMEEL 622
            F   LK G+ ED  N+ +LA LLR+ ST S      L DY  RMKEGQ  IYYIT ++  A ++SP LE  KKKG EVL M D +DE+A+  L EF+G  L S  K  + L + +D  EKK  E   E F+ L   +K+ L                P CLV    G +  + R++K         AG  +  +K  +E+N  + ++ +L
Sbjct:  421 FGAVLKEGLGEDFANRERLARLLRFASTSSDQASVGLADYKARMKEGQEAIYYITADTLAAAKHSPQLEVFKKKGIEVLLMTDRVDEWALNYLHEFDGTPLQSVAKGAVDLGKLQDEAEKKAAEEAAEAFKPLLARLKETLKDKAEDVRVTTRLVDSPACLVVHGDGMSTQLARLLK--------QAGQQAPETKPVLEVNASHALVRKL 622          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_RALSO (Chaperone protein htpG OS=Ralstonia solanacearum GN=htpG PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.021e-27
Identity = 77/210 (36.67%), Postives = 114/210 (54.29%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHST-KSGDELT-SLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLK--EKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            F + LK G+ ED  NK ++A+LLR+ ST  +GDE T SL DY+ RMK+GQ+ IYY++ E+  A ++ P LE  +KKG EVL + D +DE+ +  L +FE K LVS  + GL L   EDE +  E  K   +F+ L    K VL                P CLV  E   +  + R++K    +         +K  +E+NP +P++ +L
Sbjct:  387 FGQVLKEGLGEDFANKDRIAKLLRFASTHNAGDEQTVSLADYIGRMKDGQDKIYYVSAENWTAAKSGPHLEVFRKKGVEVLLLTDRVDEWMLSFLHDFEEKALVSVARGGLDLGALEDEAERAEHAKVEGEFKPLVDRAKAVLADKAKDVRITHRLTDSPSCLVADEGDISGTLARLLKQAGQK------APDTKPVLELNPAHPLVRKL 590          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_METPP (Chaperone protein htpG OS=Methylibium petroleiphilum (strain PM1) GN=htpG PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.154e-27
Identity = 74/208 (35.58%), Postives = 113/208 (54.33%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESED--EKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            F   LK G+ ED  N+ +LA+LLR+ ST++ DE  SL DY+ RMK+GQ  IYYIT ++  A  +SP LE  +KKG EVL + D +DE+ +  L EFEGK L S  K  + L + +D  EK+  E   E F+ + + +KD L                P CLV  +   + ++ R++K       +     +S   +E+N E+ +++ L
Sbjct:  385 FGAVLKEGVGEDHANRERLAKLLRFASTQA-DEGVSLADYLARMKDGQEAIYYITADTTAAARHSPQLEVFRKKGIEVLLLTDRVDEWMLSHLFEFEGKPLQSVAKGAVDLGKLQDEGEKQQAEAAAEAFKPVLEKLKDTLKERAKDVRVTTRLVDSPACLVVEDGDISGHLARLLK------QAGQSAPTSLPILEVNTEHALVKRL 585          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_FRASC (Chaperone protein htpG OS=Frankia sp. (strain CcI3) GN=htpG PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.154e-27
Identity = 73/225 (32.44%), Postives = 117/225 (52.00%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKM----KETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKD 667
            F   LK G+ ED+ N+  +  L+   ST   D  T+L++Y+ RMK+ QN+IYY+TG+S+  +ENSP +E  + KGYEVL + D +DE  V ++ EF+GK L S  K  + LD ++DEKK     +E L++ F  L   +   L                P CLV   +  T  +E++ +A              K+ +E+NP + ++  LR   + D +  ++ D
Sbjct:  398 FGAALKEGLLEDADNQDAILGLVSVDSTHDADRPTTLREYIERMKDAQNEIYYLTGDSRGMIENSPHMEAFRAKGYEVLILTDPVDEVWVERVAEFDGKPLKSIAKGEVDLD-TDDEKKSSEAEREQLRKDFAALLPWLAAKLEDDVKEVRLSSRLTTSPACLVGDTFDMTPALEKMYRAMGHE------MPRPKRILELNPTHALVMGLRAAHERDADSAALGD 615          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_MANSM (Chaperone protein htpG OS=Mannheimia succiniciproducens (strain MBEL55E) GN=htpG PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.731e-27
Identity = 77/216 (35.65%), Postives = 115/216 (53.24%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKL-DESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAG--YMSSKKTMEINPENPIMEELRKRAD 637
            F   LK G+ ED  NK ++A+L R+ ST   S ++  S +DY++RMKEGQ  +YYIT +S  A +NSP LE   KKG EVL + D IDE+ +  L EF+GK L S TK  L L D ++ E++ ++   EKF+   + +K +LG               P  + T     T  M ++         +M+G      K T EINP++ ++++  K  D
Sbjct:  380 FGLVLKEGVAEDFANKEQIAKLYRFASTHTDSSEQNVSFEDYISRMKEGQKAVYYITADSYVAAKNSPHLELFNKKGIEVLLLSDRIDEWMLSYLTEFDGKPLQSVTKADLDLGDLADKEEENQKEQDEKFDSFIQRVKSLLGERVKDVRITHRLTDTPAVVSTDNDQMTTQMAKLF--------AMSGQPVPEVKYTFEINPQHELVKKAAKVTD 587          
The following BLAST results are available for this feature:
BLAST of FC931307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HTPG_PSEHT1.771e-2733.94Chaperone protein htpG OS=Pseudoalteromonas halopl... [more]
HTPG_DESPS1.771e-2735.27Chaperone protein htpG OS=Desulfotalea psychrophil... [more]
HTPG_VESOH2.313e-2733.64Chaperone protein htpG OS=Vesicomyosocius okutanii... [more]
HTPG_RUTMC2.313e-2734.88Chaperone protein htpG OS=Ruthia magnifica subsp. ... [more]
HSP82_ENCCU2.313e-2735.45Heat shock protein 90 OS=Encephalitozoon cuniculi ... [more]
HTPG_VEREI3.021e-2736.67Chaperone protein htpG OS=Verminephrobacter eiseni... [more]
HTPG_RALSO3.021e-2736.67Chaperone protein htpG OS=Ralstonia solanacearum G... [more]
HTPG_METPP5.154e-2735.58Chaperone protein htpG OS=Methylibium petroleiphil... [more]
HTPG_FRASC5.154e-2732.44Chaperone protein htpG OS=Frankia sp. (strain CcI3... [more]
HTPG_MANSM6.731e-2735.65Chaperone protein htpG OS=Mannheimia succiniciprod... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34103G02EF PostHarvP1 Citrus clementina cDNA clone C34103G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931307 ID=FC931307; Name=FC931307; organism=Citrus clementina; type=EST; length=721bp
GTCATTCTCTAAGAACCTAAAGCTTGGTATCCACGAGGACTCCACCAACA
AGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGAT
GAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAAGGCCAGAA
TGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCC
CATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTT
GATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAA
GAAGCTTGTCTCAGCGACCAAAGAAGGTCTCAAGCTTGATGAGAGTGAAG
ATGAGAAGAAGATGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGC
AAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTC
TGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATGGAT
GGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGACAAC
AGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGATCAATCCGGA
GAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATGCGGACAAGAATG
ACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAGACTGCTCTCCTC
ACTTCTGGTTNCAGCCTTGAT
back to top