FC931307

Overview
NameFC931307
Unique NameFC931307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15313 contig Ccv1_Contig15313:26..746. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_MYCVP (Chaperone protein htpG OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.719e-26
Identity = 71/211 (33.65%), Postives = 107/211 (50.71%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVI---KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRK 628
            F + LK G+  D  N+  L  +  + ST S DE T+L +YV RM +GQ+ I+Y  GES++ + +SP LE  K KGYEVL + D +DE  V  + EF+GK L S  K  + LD   D        +E+ +G   +I   K+ L                P CL+T  +G T  + R+ +A      S       K+ +E+NP +P++  LR+
Sbjct:  395 FGRVLKEGLLTDIENQETLLRVCSFASTHSEDEPTTLAEYVERMPDGQSQIFYAAGESRQQLLHSPHLEAFKAKGYEVLLLTDPVDEVWVESVHEFDGKPLQSVAKGEVDLDSDADNDGQDAERQEREQGFADLIAWLKEALSDHVKEVRLSTRLTDSPACLITDTFGITPALARMYRA------SGQPVPVEKRILELNPNHPLITGLRE 599          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_HAEI8 (Chaperone protein htpG OS=Haemophilus influenzae (strain 86-028NP) GN=htpG PE=3 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.269e-25
Identity = 76/214 (35.51%), Postives = 111/214 (51.87%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKS--GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEK-FEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F   LK G  ED  NK  +A+LLR+ ST +   ++  SL+DY+ RMKEGQ  IYYIT +S  A +NSP LE   KKG EVL + D IDE+ +  L EF+GK+L S TK  L L +  D++   +  ++K F    + +K++LG               P  + T     T  M ++  A              K T E+NPE+ +++++   AD
Sbjct:  381 FGLVLKEGPAEDFANKETIAKLLRFASTHNDGSEQTVSLEDYILRMKEGQKAIYYITADSYVAAKNSPHLELFNKKGIEVLLLSDRIDEWMLSYLTEFDGKQLQSITKADLDLGDLADKESETQKQQDKAFGSFIERVKNLLGERVKTVRLTHNLTDTPAVVSTDNDQMTTQMAKLFAAAG------QPVPEVKYTFELNPEHYLVKKVADIAD 588          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_DESHY (Chaperone protein htpG OS=Desulfitobacterium hafniense (strain Y51) GN=htpG PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.269e-25
Identity = 76/217 (35.02%), Postives = 123/217 (56.68%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD-ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKL-DESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIME---ELRKRADA 640
            FS  LK G   D T++ ++ +LLR+ S+K+G+ EL SL DYV RMKEGQ  IY+I G +++ +E  P+LE  K K YEV+Y  D ID+Y    ++E++GK+L+SA    L L DE     + K   +E+ +     +K+VLG               P  ++   YG T +M+R+M+   L +  +    +    +EINP++ +++   +LRK+ D+
Sbjct:  366 FSIFLKEGAANDFTHRQEILKLLRFESSKTGEGELISLGDYVGRMKEGQEAIYFINGPTRQIIEEGPYLEVFKNKDYEVIYTYDGIDDYVFDMIREYDGKRLLSADHGDLNLADEDGASAEEKLLSEEELKEFNDWLKEVLGEKVTEVRESKRLVDSP-AIILSHYG-THSMQRMMQ---LMNRDLQDVPAG--ILEINPKHVLIQRLNDLRKQEDS 575          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_CUPTR (Chaperone protein htpG OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=htpG PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.269e-25
Identity = 69/211 (32.70%), Postives = 118/211 (55.92%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKS--GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE--SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELR 625
            F + LK G+ ED  N+ ++A+LLR+ ST +   ++  +L  YV RMKEGQ+ IYY+T ++  A +NSP LE  +KKG EVL + D +DE+ +  L+EF+GK+LVS  +  L L +   E EK  +E  +  ++ + +  + VL                  CLV+ E   +  ++R++K    +         ++  +E+NPE+ ++++LR
Sbjct:  387 FGQALKEGVGEDQANQERVAKLLRFASTHNDTAEQNVALAAYVGRMKEGQDKIYYVTADTWSAAKNSPHLEVFRKKGIEVLLLTDRVDEWMLSYLREFDGKELVSVARGDLDLGKLADEAEKAEQEKAEADWKDVIERARAVLAGKAKDVRVTLRLTESASCLVSDEGDMSGYLQRLLKQAGQK------APDAQPILELNPEHALVKKLR 591          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_PHOLL (Chaperone protein htpG OS=Photorhabdus luminescens subsp. laumondii GN=htpG PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.658e-25
Identity = 72/207 (34.78%), Postives = 112/207 (54.11%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKM-KETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIME 616
            F   +K G  EDSTNK  +A+LLR+ ST   S  +  SL++YV+RM EGQ+ IYYIT +S  A +NSP LE  +KKG EVL + + IDE+ +G L +F+GKK  S +K    LD+  DE K  +E ++++ E   + +K +LG               P  + T     +  M ++  A   +   +      K   E+NP++ +++
Sbjct:  381 FGLVMKEGPAEDSTNKEAIAKLLRFASTHNDSSAQTVSLEEYVSRMTEGQDKIYYITADSYAAAKNSPHLELFRKKGIEVLLLSERIDEWMMGYLTDFDGKKFQSVSKADESLDKLADENKAEQEEIEKQLEPFVERVKTLLGDRVKEVKLTHRLTDTPAIVTTNVDEMSTQMAKLFAAAGQQVPDV------KYNFELNPDHQLVK 581          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_ACTP2 (Chaperone protein htpG OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=htpG PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.693e-25
Identity = 72/218 (33.03%), Postives = 111/218 (50.92%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE--SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            F   LK G+ ED  NK ++A L R+ ST+  S ++  SL DYV RMKEGQ  IY++T +S  A +NSP LE   KKG EVL + D IDE+ VG L EF+GK L S TK  L L +   +++++ ++  + +F    +  +   G               P  + T     T  M ++  A   +   +      K T E+NP++ +++++    D  K
Sbjct:  379 FGLVLKEGVGEDFANKQQIASLFRFASTQTDSSEQTVSLADYVGRMKEGQKAIYFLTADSYVAAKNSPHLELFNKKGIEVLLLSDRIDEWVVGHLTEFDGKPLQSITKSDLDLGDLADKEQEESQKAQQAEFGSFLERAQSYFGERVKKVVLTHRLTDTPAVVSTDNDEMTTQMAKLFAAMGQKAPEV------KYTFELNPDHRMVKKIADLTDETK 590          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_SALAI (Chaperone protein htpG OS=Salinispora arenicola (strain CNS-205) GN=htpG PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.824e-25
Identity = 67/224 (29.91%), Postives = 113/224 (50.45%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDE---KKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKD 667
            F   +K G+ +D+ N+  L E+L   ST    E T L  YV RMK+GQ++IYY TGE++  +ENSP +E  + KG+EVL + D +DE  V ++ E++GK L S  K  + LD  E+    +  +E  + ++  L   +   L                P C+V   +  T  +E++ +A       +      K+ +E+NP +P++  LRK  +    + S+ +
Sbjct:  384 FGAVVKEGLIDDTENRDSLLEILSVASTHDPAEPTDLTGYVNRMKDGQSEIYYATGENRTTIENSPHMEAFRAKGFEVLLLTDPVDEVWVERVGEYDGKTLRSVAKGQVDLDTDEERSAAEAERERQRTEYADLLTWLGSALADQVREVRLSARLTTSPACVVGDAHDVTPTLEKMYRAMGHEVPQV------KRILELNPTHPLVSGLRKAREQGATEDSLTE 601          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_BACA2 (Chaperone protein htpG OS=Bacillus amyloliquefaciens (strain FZB42) GN=htpG PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.824e-25
Identity = 71/217 (32.72%), Postives = 117/217 (53.92%), Query Frame = 2
Query:    2 SFSKNLKLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVT-GEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            SF + LK G++ D   NK  L +LL ++S+K   +L +L +YV+RM E Q  IYY +G+S + +E  P  E +  KGYE+LY  + IDE+A+  L  +E K+  S +   L +D  EDEK+  E  + +++ L + +K++L                P C  T GE   T  ME+++   A+ D+     + ++K +EINP + + E L+     D+
Sbjct:  382 SFGRQLKFGVYNDFGANKDVLKDLLLFYSSKE-KKLVTLDEYVSRMPEDQKYIYYASGDSYERIEKLPQTEMVADKGYEILYFTEDIDEFAIKMLTSYEEKEFKSVSSADLGIDSDEDEKQ-TEAEENEYKDLFESMKEILADKVKNVRASKRLKSHPVCFATDGEV--TIEMEKVL--NAMPDSQQ---VKAEKVLEINPNHEVFETLKNAHGQDR 589          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_BACSK (Chaperone protein htpG OS=Bacillus clausii (strain KSM-K16) GN=htpG PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.300e-25
Identity = 72/218 (33.03%), Postives = 119/218 (54.59%), Query Frame = 2
Query:    2 SFSKNLKLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVT-GEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKN 649
            +F + LK G++ D   NK  L +LL ++S+    +L SL DYV+RMKEGQ  IYY TGES + +   P  E +  +GYE+LY  + +DE+A+  L+ ++ K+ +S +     LD   DEK+ +ET  E+ + L + +K +L                P  L   GE   T  ME+++  QA+ DN     + ++K +EINP + +   L++  + D++
Sbjct:  382 AFGRQLKFGVYNDFGANKDDLQDLLLFYSSTE-KKLVSLSDYVSRMKEGQTYIYYATGESNERIAKLPQTEMVADQGYEILYFTEDVDEFAIKMLRSYDEKEFMSVS--SADLDIETDEKQEEETNSEENKKLFEKMKSILDGKVKDVRTSKRLKSHPVFLAADGEI--TLEMEKVL--QAMPDNQ---NVKAEKVLEINPNHDVFHSLKQAYEEDED 589          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_ACTPJ (Chaperone protein htpG OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=htpG PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.300e-25
Identity = 71/215 (33.02%), Postives = 110/215 (51.16%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE--SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F   LK G+ ED  NK ++A L R+ ST+  S ++  SL DYV RMKEGQ  IY++T +S  A +NSP LE   KKG EVL + D IDE+ VG L EF+GK L S TK  L L +   +++++ ++  + +F    +  +   G               P  + T     T  M ++  A   +   +      K T E+NP++ +++++    D
Sbjct:  379 FGLVLKEGVGEDFANKQQIASLFRFASTQTDSSEQTVSLADYVGRMKEGQKAIYFLTADSYVAAKNSPHLELFNKKGIEVLLLSDRIDEWVVGHLTEFDGKPLQSITKSDLDLGDLADKEQEESQKAQQAEFGSFLERAQSYFGERVKKVVLTHRLTDTPAVVSTDNDEMTTQMAKLFAAMGQKAPEV------KYTFELNPDHQMVKKIADLTD 587          
The following BLAST results are available for this feature:
BLAST of FC931307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HTPG_MYCVP9.719e-2633.65Chaperone protein htpG OS=Mycobacterium vanbaaleni... [more]
HTPG_HAEI81.269e-2535.51Chaperone protein htpG OS=Haemophilus influenzae (... [more]
HTPG_DESHY1.269e-2535.02Chaperone protein htpG OS=Desulfitobacterium hafni... [more]
HTPG_CUPTR1.269e-2532.70Chaperone protein htpG OS=Cupriavidus taiwanensis ... [more]
HTPG_PHOLL1.658e-2534.78Chaperone protein htpG OS=Photorhabdus luminescens... [more]
HTPG_ACTP23.693e-2533.03Chaperone protein htpG OS=Actinobacillus pleuropne... [more]
HTPG_SALAI4.824e-2529.91Chaperone protein htpG OS=Salinispora arenicola (s... [more]
HTPG_BACA24.824e-2532.72Chaperone protein htpG OS=Bacillus amyloliquefacie... [more]
HTPG_BACSK6.300e-2533.03Chaperone protein htpG OS=Bacillus clausii (strain... [more]
HTPG_ACTPJ6.300e-2533.02Chaperone protein htpG OS=Actinobacillus pleuropne... [more]

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Properties
Property NameValue
Genbank descriptionC34103G02EF PostHarvP1 Citrus clementina cDNA clone C34103G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931307 ID=FC931307; Name=FC931307; organism=Citrus clementina; type=EST; length=721bp
GTCATTCTCTAAGAACCTAAAGCTTGGTATCCACGAGGACTCCACCAACA
AGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGAT
GAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAAGGCCAGAA
TGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCC
CATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTT
GATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAA
GAAGCTTGTCTCAGCGACCAAAGAAGGTCTCAAGCTTGATGAGAGTGAAG
ATGAGAAGAAGATGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGC
AAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTC
TGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATGGAT
GGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGACAAC
AGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGATCAATCCGGA
GAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATGCGGACAAGAATG
ACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAGACTGCTCTCCTC
ACTTCTGGTTNCAGCCTTGAT
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