FC931307
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_METNO (Chaperone protein htpG OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=htpG PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.456e-13 Identity = 56/211 (26.54%), Postives = 98/211 (46.45%), Query Frame = 2 Query: 2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRA 634 +F LK GI ED+ + +A L+R+ S+ + + TS DYV+RMK Q IY + G+ KA+ +S +E + +G EVL + D +D + +L +F+GK + S T+ L E + E L +K++L L G M+R+++ + G+ + +E+NP + ++ L +RA Sbjct: 366 AFGPVLKEGIWEDAEQRDDIAGLIRFRSS-AVEGWTSFADYVSRMKPNQEAIYILVGDDTKALASSAQIEGFRARGIEVLLLSDHVDAFWPERLDKFDGKPIRSITQSADDLSAFAPEGE-SEGEAADLADLVPKLKEILKDDVTDVRASQRLVESAVLLSASSGGPDLQMQRLLR------RAGRGFGAGLPVLELNPRHALVRRLAERA 568
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_NEOSM (Chaperone protein htpG OS=Neorickettsia sennetsu (strain Miyayama) GN=htpG PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.532e-13 Identity = 53/219 (24.20%), Postives = 103/219 (47.03%), Query Frame = 2 Query: 2 SFSKNLKLGIHE--DSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKE----KFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADA 640 +F LK G+ E + + +L L R++S K ++L SL +Y+ M Q +IY + S ++ +NSP LE +G +VL+ D +D++ + E++ + S T+ + LD + +K + +++ + + L +++VL P CL + ME+ M Q + SKK +EIN +P++ ++ + D+ Sbjct: 370 NFGAVLKEGLCEAMPTDERERLFALCRFYSLKK-EKLISLDEYIQDMHPEQKEIYCLCSTSFESAKNSPQLEGFVSRGLDVLFFTDPVDDFWISVSHEYKSYNIKSITRSSIDLDAFAELEKAGQEVQQHHDKEIDRLIAKMQEVLKDEVESVRISKRLTESPVCLAVPDGAMDIRMEKFMLEQKQL------HSRSKKILEINASHPVIGKIIGKVDS 581
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_CAMHC (Chaperone protein htpG OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=htpG PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.609e-12 Identity = 50/149 (33.56%), Postives = 77/149 (51.68%), Query Frame = 2 Query: 5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSA-------TKEGLKLDESEDEKKMKETLKEKFEG--LCKVIKDVLG 424 F K LK G+ ST K ++ +L + S+K+G EL L +Y M Q +IYYI+G + ++NSP LE+ K EVL D ID + + EF+ + S K + + E +K+KE LK+K + + K +K+ LG Sbjct: 377 FGKVLKEGLWGFSTEKDEILKLCLFKSSKTG-ELIDLAEYKKSMAAEQKEIYYISGGKAETLKNSPLLEEFNAKNIEVLICDDEIDTIIMPMIGEFDKTPIKSVMDADFSDDKGEISAQDLEIAEKIKENLKDKVKDVKISKRLKNALG 524
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: TRAP1_DICDI (TNF receptor-associated protein 1 homolog, mitochondrial OS=Dictyostelium discoideum GN=trap1 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.102e-12 Identity = 53/218 (24.31%), Postives = 106/218 (48.62%), Query Frame = 2 Query: 5 FSKNLKLGIHEDSTNKTKLAELLRYHS----TKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSA-TKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 643 F K GI D K ++++LLR+ S T S + SL+ YV+RMK Q +IY+++ ++ +SP+ E + K EV+++ +A+DE+ + + F KK+VS +KE + + +KK + +++ + + V P ++ E +AN R++K + + K+ +E N +PI+ +L ++ +++ Sbjct: 459 FGGFFKEGIITDFKWKDEISKLLRFESSNGSTASKTDAVSLEQYVSRMKPEQKNIYFLSVPNRAVGLSSPYYEPFQLKDIEVIFLYNAVDEFVLTNVGHFGDKKIVSVESKEAEEFLATNQDKKTETLSQDEIDKFLSWVSTVASDKVTQAKSTTRSISSPAIIIDHE---SANFRRMLKMV----EPGKQHETPKQVVEFNMNHPIILKLVQQTESN 669 The following BLAST results are available for this feature:
BLAST of FC931307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 374
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931307 ID=FC931307; Name=FC931307; organism=Citrus clementina; type=EST; length=721bpback to top |