FC931311

Overview
NameFC931311
Unique NameFC931311
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length638
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4548 contig Ccv1_Contig4548:40..677. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER23_ARATH (Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 6.767e-46
Identity = 95/191 (49.74%), Postives = 122/191 (63.87%), Query Frame = 1
Query:   67 LILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLT-AQDMTVLSGGHAIGFAR 636
            LI+  + L A  S AQL P FY  +CP    I  D +   +   PR AAS+LRL FHDCFV GCD S+LLD++ +F  EK+A PN+NS RGF+VID +K  +E AC  TVSCADI+ +A++  V L GGP W VPLGRRD+  A  + AN+ +P P S+L  L + FA  GL    D+  LSGGH  G A+
Sbjct:   15 LIVGCLLLQASNSNAQLRPDFYFRTCPPIFNIIGDTIVNELRTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNKNSVRGFDVIDRMKAAIERACPRTVSCADIITIASQISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFSTLTQLKTAFADVGLNRPSDLVALSGGHTFGKAQ 205          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PERE5_ARMRU (Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 5.729e-45
Identity = 94/176 (53.41%), Postives = 115/176 (65.34%), Query Frame = 1
Query:  112 QLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLT-AQDMTVLSGGHAIGFAR 636
            QL P FY+ +CP+   I ++ +   +   PR AASILRL FHDCFV GCD S+LLD + +F  EK+A PN NSARGF VID +KT LE AC  TVSCADIL +A++  V L GGP+W VPLGRRD+  A    AN+ +P P  +LA L   FA  GL    D+  LSGGH  G AR
Sbjct:    1 QLRPDFYSRTCPSVFNIIKNVIVDELQTDPRIAASILRLHFHDCFVRGCDASILLDTSKSFRTEKDAAPNVNSARGFNVIDRMKTALERACPRTVSCADILTIASQISVLLSGGPSWAVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRAR 176          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER5_ARATH (Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 9.772e-45
Identity = 94/194 (48.45%), Postives = 126/194 (64.95%), Query Frame = 1
Query:   49 SYLFVTLILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANS-QIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIG 627
            S  FV ++++II L +    AQLSPTFY  SC N     R  +  A+ R+ R AAS++R+ FHDCFV+GCD S+LL+ T+T   E++A PN  S RGFEVID  K+ +E  C   VSCADI+AVAARD    +GGP W V +GRRD+  A ++ ANS ++PG   +L  L  +F+ KGL  +D+  LSG H IG
Sbjct:    5 SLRFVLMMVSII-LTSSICQAQLSPTFYDQSCRNALSKIRSSVRTAIARERRMAASLIRMHFHDCFVHGCDASILLEGTSTIESERDALPNFKSVRGFEVIDKAKSEVEKVCPGIVSCADIIAVAARDASEYVGGPKWAVKVGRRDSTAAFKALANSGELPGFKDTLDQLSGLFSKKGLNTRDLVALSGAHTIG 197          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 1.276e-44
Identity = 98/192 (51.04%), Postives = 125/192 (65.10%), Query Frame = 1
Query:   67 LILTIISL-LACTST-AQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFAR 636
            ++LT+ +L + C+   AQLSP  YA SCPN  +I R ++  A+  + R AAS++RL FHDCFVNGCD S+LLD   +   EK A PN NSARGFEVID IK  +E AC   VSCADIL +AARD V L GGP W V LGR+D   A+Q++AN+ +P P   L  +I+ F A  L   D+  LSG H  G A+
Sbjct:   12 VLLTVFTLCMLCSGVRAQLSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGADS---EKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGRKDGLVANQNSANN-LPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAK 199          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.177e-44
Identity = 97/193 (50.26%), Postives = 120/193 (62.18%), Query Frame = 1
Query:   58 FVTLILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFAR 636
            FV  IL ++++    S AQLS TFY T+CPN   I R  M +      R  A I+RL FHDCFVNGCDGS+LLD   T T EK+A P    A GF+++D IKT LE  C   VSCADILA+A+  GV L  GP+W V  GR+D+ TA++S ANS IP P  +LA +I  F  KG+   D+  LSG H  G AR
Sbjct:    6 FVGAILFLVAIFGA-SNAQLSATFYDTTCPNVTSIVRGVMDQRQRTDARAGAKIIRLHFHDCFVNGCDGSILLDTDGTQT-EKDA-PANVGAGGFDIVDDIKTALENVCPGVVSCADILALASEIGVVLAKGPSWQVLFGRKDSLTANRSGANSDIPSPFETLAVMIPQFTNKGMDLTDLVALSGAHTFGRAR 195          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 2.843e-44
Identity = 91/189 (48.15%), Postives = 118/189 (62.43%), Query Frame = 1
Query:   61 VTLILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIG 627
            V L L + +     S+AQL   FY+ SCP+ + + R EM +A+   P  A  +LR+ FHDCFV GCDGSVLLD     T EK+A PN+ + RGF  ++ +K  +E AC  TVSCAD+LA+ ARD V L  GP W VPLGRRD R  S +    Q+P P+++   L  MFAAK L  +D+ VLS GH IG
Sbjct:    6 VILALLLAAAAVMASSAQLDEKFYSNSCPSVEAVVRKEMVRALGAAPSLAGPLLRMHFHDCFVRGCDGSVLLDSAGNSTAEKDATPNQ-TLRGFGFVERVKAAVEKACPGTVSCADVLALMARDAVWLSKGPFWAVPLGRRDGR-VSIANETDQLPPPTANFTELTQMFAAKNLDLKDLVVLSAGHTIG 192          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER22_ARATH (Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=1 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 6.334e-44
Identity = 96/191 (50.26%), Postives = 119/191 (62.30%), Query Frame = 1
Query:   67 LILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLT-AQDMTVLSGGHAIGFAR 636
            LIL  + L A  S AQL P FY  +CP    I  + +   +   PR AAS+LRL FHDCFV GCD S+LLD++ +F  EK+A PN NSARGF VID +K  LE AC   VSCADIL +A++  V L GGP W VPLGRRD+  A  + AN+ +P P  +L  L + FA  GL    D+  LSGGH  G A+
Sbjct:   15 LILGCLLLQASNSNAQLRPDFYFGTCPFVFDIIGNIIVDELQTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNANSARGFNVIDRMKVALERACPGRVSCADILTIASQISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFFNLTQLKTAFADVGLNRTSDLVALSGGHTFGRAQ 205          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 8.272e-44
Identity = 90/189 (47.62%), Postives = 121/189 (64.02%), Query Frame = 1
Query:   70 ILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFAR 636
            IL ++  L C S AQLSPTFY  +C N     R  +  A++R+ R AAS++RL FHDCFVNGCD SV+L  T T   E+++  N  SARGFEVID  K+ +E+ C   VSCADI+AVAARD    +GGP + V +GRRD+  A ++ A+  +P   +SL  L  +F  KGL  +D+  LSG H +G A+
Sbjct:    6 ILVLLLSLCCFSQAQLSPTFYDQTCQNALSTIRSSIRTAISRERRMAASLIRLHFHDCFVNGCDASVMLVATPTMESERDSLANFQSARGFEVIDQAKSAVESVCPGVVSCADIIAVAARDASEYVGGPRYDVKVGRRDSTNAFRAIADRDLPNFRASLNDLSELFLRKGLNTRDLVALSGAHTLGQAQ 194          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.407e-43
Identity = 91/198 (45.96%), Postives = 130/198 (65.66%), Query Frame = 1
Query:   34 MASSISYLFVTLILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIG 627
            +A S+S+  V ++  I         AQL   FYA SCPN ++I +D ++  V+  P  AA+++R+ FHDCFV GCDGSVL++ T+    E++A PN  + RGF  IDAIK+ LEA C   VSCADI+A+A+RD V   GGP W+VP GRRD R ++ + A + IP P+S++  L ++FA +GL  +D+ +LSG H IG
Sbjct:    7 IALSVSFFLVGIVGPI--------QAQLQMNFYANSCPNAEKIVQDFVSNHVSNAPSLAAALIRMHFHDCFVRGCDGSVLINSTSG-NAERDATPNL-TVRGFGFIDAIKSVLEAQCPGIVSCADIIALASRDAVVFTGGPNWSVPTGRRDGRISNAAEALANIPPPTSNITNLQTLFANQGLDLKDLVLLSGAHTIG 194          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER30_ARATH (Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 7.003e-43
Identity = 85/189 (44.97%), Postives = 124/189 (65.61%), Query Frame = 1
Query:   61 VTLILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIG 627
            V +++T++  +  +S AQL   FYA SCPN ++I  D +   ++  P  AA ++R+ FHDCFV GCDGSVL++ T+    E++A PN  + RGF  ++ IK  LE  C  TVSCADI+A+ ARD V   GGP+W+VP GRRD R ++++ A + IP P+S+  TL  +F  +GL  +D+ +LSG H IG
Sbjct:   11 VVVVVTVLIGMLRSSEAQLQMNFYAKSCPNAEKIISDHIQNHIHNGPSLAAPLIRMHFHDCFVRGCDGSVLINSTSG-NAERDAPPNL-TLRGFGFVERIKALLEKVCPKTVSCADIIALTARDAVVATGGPSWSVPTGRRDGRISNKTEATNNIPPPTSNFTTLQRLFKNQGLNLKDLVLLSGAHTIG 197          
The following BLAST results are available for this feature:
BLAST of FC931311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER23_ARATH6.767e-4649.74Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=... [more]
PERE5_ARMRU5.729e-4553.41Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1... [more]
PER5_ARATH9.772e-4548.45Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 ... [more]
PER59_ARATH1.276e-4451.04Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]
PERX_TOBAC2.177e-4450.26Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PER1_ORYSJ2.843e-4448.15Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER22_ARATH6.334e-4450.26Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=... [more]
PER4_ARATH8.272e-4447.62Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]
PER3_ARATH2.407e-4345.96Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PER30_ARATH7.003e-4344.97Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC34103G06EF PostHarvP1 Citrus clementina cDNA clone C34103G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931311 ID=FC931311; Name=FC931311; organism=Citrus clementina; type=EST; length=638bp
ATCTGCTTTAACTTTCCATTTTTGGATTGGTTCATGGCATCTTCAATTTC
TTATTTGTTTGTTACACTTATACTCACAATTATATCCCTTCTAGCTTGCA
CCTCCACTGCGCAACTTTCTCCAACCTTTTATGCAACATCTTGCCCCAAT
TTTCAAAGAATCGCGAGGGATGAAATGACCAAAGCTGTTAATAGACAACC
GCGTAATGCTGCCTCTATTCTTCGCCTCTTCTTCCATGACTGCTTCGTTA
ATGGCTGCGATGGGTCGGTACTACTAGATGACACAGCCACATTCACCGGC
GAGAAGAATGCAGGACCAAACAGAAACTCTGCTAGGGGTTTCGAAGTGAT
TGACGCCATTAAAACTCGTCTGGAAGCAGCTTGCAACGCCACCGTTTCAT
GTGCCGACATCCTTGCTGTTGCAGCCCGAGACGGTGTCGCCTTGCTTGGA
GGACCGACTTGGACGGTACCGCTCGGCCGGCGAGATGCAAGAACGGCCAG
TCAGAGTGCAGCCAATAGCCAAATCCCTGGACCATCCTCCAGCCTGGCAA
CACTCATATCAATGTTTGCAGCCAAAGGCCTGACCGCCCAAGACATGACA
GTCCTCTCCGGCGGCCACGCCATCGGATTCGCTCGATG
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