FC931311

Overview
NameFC931311
Unique NameFC931311
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length638
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4548 contig Ccv1_Contig4548:40..677. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER1_SOLLC (Suberization-associated anionic peroxidase 1 OS=Solanum lycopersicum GN=TAP1 PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.118e-40
Identity = 85/159 (53.46%), Postives = 110/159 (69.18%), Query Frame = 1
Query:  166 RDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDD-TATFTGEKNAGPNRNSARGFEVIDAIKTRLEAAC-NATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFAR 636
            R  +  A++ + R  AS++RL FHDCFV+GCDG +LLDD   TFTGE+N+ PN NSARG+EVI   K  +   C N +VSCADILA+AARD VA LGG T++V LGR DARTA+ S A +Q+P P  +L   I  F+ K  T ++M  L+G H +GFAR
Sbjct:   87 RAVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVINTCPNVSVSCADILAIAARDSVAKLGGQTYSVALGRSDARTANFSGAINQLPAPFDNLTVQIQKFSDKNFTLREMVALAGAHTVGFAR 245          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.907e-40
Identity = 84/188 (44.68%), Postives = 115/188 (61.17%), Query Frame = 1
Query:   70 ILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFA 633
            +L ++  +   + AQL   FY+ SCPN + I  + + +   R P   A++ R+ FHDCFV GCD S+L+D T +   EKNAGPN  S RGFE+ID IKT LEA C +TVSC+DI+ +A RD V L GGP++ VP GRRD   ++   AN  +P P  S+  ++S F  KG+   D   L G H +G A
Sbjct:    8 VLLLLLFIFPVALAQLKFKFYSESCPNAETIVENLVRQQFARDPSITAALTRMHFHDCFVQGCDASLLIDPTTSQLSEKNAGPNF-SVRGFELIDEIKTALEAQCPSTVSCSDIVTLATRDAVFLGGGPSYVVPTGRRDGFVSNPEDANEILPPPFISVEGMLSFFGNKGMNVFDSVALLGAHTVGIA 194          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.491e-40
Identity = 89/167 (53.29%), Postives = 106/167 (63.47%), Query Frame = 1
Query:  127 FYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIG 627
            FY+ +CP  + I R  +   VN  P  AA ILR+ FHDCFV GCDGS+L+   AT   EK A  N    RG+E+ID  KT+LEAAC   VSCADILA+AARD V L GG +W VP GRRD R  SQ++  S +P PS S+      FAAKGL  QD+  L GGH IG
Sbjct:   36 FYSRTCPRAESIVRSTVRSHVNSDPTLAAKILRMHFHDCFVQGCDGSILISGPAT---EKTAFANLG-LRGYEIIDDAKTQLEAACPGVVSCADILALAARDSVVLSGGLSWQVPTGRRDGR-VSQASDVSNLPAPSDSVDVQKQKFAAKGLNTQDLVTLVGGHTIG 197          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PERA_IPOBA (Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.253e-40
Identity = 80/158 (50.63%), Postives = 110/158 (69.62%), Query Frame = 1
Query:  166 RDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAAC-NATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFAR 636
            ++ +  A+N + R  AS++RLFFHDCFV+GCD  +LL+DTATFTGE+ A  N NS RGF VI+  K  ++    + +VSCADIL++AARD      G T+TV LGR+DARTA+ + AN+Q+ GP+ +L + ++ FAAKG    +M  L G H IGFAR
Sbjct:   76 KEVVVAAINAEARMGASLIRLFFHDCFVDGCDAGLLLNDTATFTGEQTAAGNNNSVRGFAVIEQAKQNVKTQMPDMSVSCADILSIAARDSFEKFSGSTYTVTLGRKDARTANFTGANTQLVGPNENLTSQLTKFAAKGFNGTEMVALLGSHTIGFAR 233          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 5.549e-40
Identity = 89/192 (46.35%), Postives = 117/192 (60.94%), Query Frame = 1
Query:   55 LFVTLILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLD-DTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIG 627
            L V     +  LL  T+ AQL   FY TSCPN + + R  +  A  +    AA ++RL FHDCFV GCDGSVLL  +      E++A PN  S RGF+VIDA KT +E +C  TVSCADI+A AARD ++L G  ++ VP GRRD R  S +     +P P+S+  +L  +F AK L+ +DM VLSG H +G
Sbjct:   15 LTVVAACALCLLLPATARAQLRVGFYDTSCPNAEALVRQAVAAAFAKDAGIAAGLIRLHFHDCFVRGCDGSVLLTVNPGGGQTERDALPNNPSLRGFDVIDAAKTAVEQSCPRTVSCADIVAFAARDSISLTGSVSYQVPAGRRDGR-VSNATETVDLPPPTSTAQSLTDLFKAKELSVEDMVVLSGAHTVG 205          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 7.247e-40
Identity = 84/159 (52.83%), Postives = 108/159 (67.92%), Query Frame = 1
Query:  166 RDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDD-TATFTGEKNAGPNRNSARGFEVIDAIKTRLEAAC-NATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFAR 636
            R  +  A++ + R  AS++RL FHDCFV+GCDG +LLDD   TFTGE+N+ PN NSARG+EVI   K  +   C N +VSCADILA+AARD VA LGG T+ V LGR DARTA+ + A +Q+P P  +L   I  F  K  T ++M  L+G H +GFAR
Sbjct:   86 RGVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVIDTCPNISVSCADILAIAARDSVAKLGGQTYNVALGRSDARTANFTGALTQLPAPFDNLTVQIQKFNDKNFTLREMVALAGAHTVGFAR 244          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.236e-39
Identity = 85/193 (44.04%), Postives = 121/193 (62.69%), Query Frame = 1
Query:   55 LFVTLILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFA 633
            L   +I  +++++   S A L   +Y  SCP  ++I  + +  A    P+  A +LR+FFHDCF+ GCD S+LLD T +   EK+ GP   S R F VI+  K +LE AC  TVSCAD++A+AARD V L GGP W+V  GR+D  T S++     +P P+ +++ LI  FAA+GL+ +DM  LSGGH IGF+
Sbjct:    7 LIFAMIFAVLAIVK-PSEAALDAHYYDQSCPAAEKIILETVRNATLYDPKVPARLLRMFFHDCFIRGCDASILLDSTRSNQAEKD-GPPNISVRSFYVIEDAKRKLEKACPRTVSCADVIAIAARDVVTLSGGPYWSVLKGRKDG-TISRANETRNLPPPTFNVSQLIQSFAARGLSVKDMVTLSGGHTIGFS 196          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.614e-39
Identity = 92/169 (54.44%), Postives = 103/169 (60.95%), Query Frame = 1
Query:  127 FYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFA 633
            FY   C N + I R  +   V   P NA  ILR+ FHDCFV+GCDGSVLL   A  T E+ A PNR S RGFEVI+  K RLE AC  TVSCADIL +AARD V L GG  W VPLGR D R +  S  N  +PGPS S+A     FAAK L   D+  L GGH IG A
Sbjct:   41 FYGNRCRNVESIVRSVVQSHVRSIPANAPGILRMHFHDCFVHGCDGSVLL---AGNTSERTAVPNR-SLRGFEVIEEAKARLEKACPRTVSCADILTLAARDAVVLTGGQRWEVPLGRLDGRISQASDVN--LPGPSDSVAKQKQDFAAKTLNTLDLVTLVGGHTIGTA 203          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.597e-39
Identity = 83/192 (43.23%), Postives = 119/192 (61.98%), Query Frame = 1
Query:   52 YLFVTLILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIG 627
            +LF+ +I  ++S  A T+   L   FY  +CP  + I +  + +AV      AA +LR+FFHDCFV GC+GSVLL+       EKN+ PN  + RGFE+ID +K  LE  C   VSC+D+LA+ ARD +  L GP+W V  GRRD    + + A   +P P +++++LI+ F +KGL  +D+ VLSGGH IG
Sbjct:   11 FLFLQVIYCLLSSFAPTNVQGLKVGFYDKACPKAELIVKKSVFEAVKNDRTIAAPLLRMFFHDCFVRGCEGSVLLE-LKNKKDEKNSIPNL-TLRGFEIIDNVKAALEKECPGIVSCSDVLALVARDAMVALNGPSWEVETGRRDGLVTNITEALLNLPSPFNNISSLITQFQSKGLDKKDLVVLSGGHTIG 200          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER64_ARATH (Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.697e-39
Identity = 84/188 (44.68%), Postives = 111/188 (59.04%), Query Frame = 1
Query:   70 ILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFA 633
            +L I+  +       LSP +Y  +CP    I  + + KA++      A++LR+ FHDCFV GCDGSVLLD       EK+  PN  S   F VID  K  LE  C   VSCADIL++AARD VAL GGPTW VP GR+D R  S++    Q+P P+ +++ L   F  +GL+  D+  LSGGH +GFA
Sbjct:    8 LLVIVIFVVSFDVQALSPHYYDHTCPQADHIVTNAVKKAMSNDQTVPAALLRMHFHDCFVRGCDGSVLLDSKGKNKAEKDGPPNI-SLHAFYVIDNAKKALEEQCPGIVSCADILSLAARDAVALSGGPTWAVPKGRKDGR-ISKAIETRQLPAPTFNISQLRQNFGQRGLSMHDLVALSGGHTLGFA 193          
The following BLAST results are available for this feature:
BLAST of FC931311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER1_SOLLC1.118e-4053.46Suberization-associated anionic peroxidase 1 OS=So... [more]
PER28_ARATH1.907e-4044.68Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]
PER2_ARAHY2.491e-4053.29Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 ... [more]
PERA_IPOBA3.253e-4050.63Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER1_MAIZE5.549e-4046.35Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]
PERX_SOLTU7.247e-4052.83Suberization-associated anionic peroxidase OS=Sola... [more]
PER66_ARATH1.236e-3944.04Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]
PER69_ARATH1.614e-3954.44Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]
PER56_ARATH3.597e-3943.23Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]
PER64_ARATH4.697e-3944.68Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC34103G06EF PostHarvP1 Citrus clementina cDNA clone C34103G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931311 ID=FC931311; Name=FC931311; organism=Citrus clementina; type=EST; length=638bp
ATCTGCTTTAACTTTCCATTTTTGGATTGGTTCATGGCATCTTCAATTTC
TTATTTGTTTGTTACACTTATACTCACAATTATATCCCTTCTAGCTTGCA
CCTCCACTGCGCAACTTTCTCCAACCTTTTATGCAACATCTTGCCCCAAT
TTTCAAAGAATCGCGAGGGATGAAATGACCAAAGCTGTTAATAGACAACC
GCGTAATGCTGCCTCTATTCTTCGCCTCTTCTTCCATGACTGCTTCGTTA
ATGGCTGCGATGGGTCGGTACTACTAGATGACACAGCCACATTCACCGGC
GAGAAGAATGCAGGACCAAACAGAAACTCTGCTAGGGGTTTCGAAGTGAT
TGACGCCATTAAAACTCGTCTGGAAGCAGCTTGCAACGCCACCGTTTCAT
GTGCCGACATCCTTGCTGTTGCAGCCCGAGACGGTGTCGCCTTGCTTGGA
GGACCGACTTGGACGGTACCGCTCGGCCGGCGAGATGCAAGAACGGCCAG
TCAGAGTGCAGCCAATAGCCAAATCCCTGGACCATCCTCCAGCCTGGCAA
CACTCATATCAATGTTTGCAGCCAAAGGCCTGACCGCCCAAGACATGACA
GTCCTCTCCGGCGGCCACGCCATCGGATTCGCTCGATG
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