FC931312

Overview
NameFC931312
Unique NameFC931312
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931312 vs. ExPASy Swiss-Prot
Match: ADK_HUMAN (Adenosine kinase OS=Homo sapiens GN=ADK PE=1 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 1.712e-48
Identity = 102/227 (44.93%), Postives = 143/227 (63.00%), Query Frame = 3
Query:   21 PAAPQGYPLLCLENPLLDIQARGDAALLQKYELKPNDAILAEDKHMGIYEDLLNR-DAKLIPGGAAQNTARGAQYML--PEQSVVYIGCVGKDKYGDMLKKTCEEAGVHTEYRVDETQPTGKCGVVITGHDRSMCTHLAAANEYKIE-HLEQPEVWSLVEKAQVYYVGGYHLTVCVPAILALGEEAAAKNKTFMFSISAPFIAQFFKDQLDSVLPYTDYTFCNETEA 689
            P A +   L  + NPLLDI A  D   L KY LKPND ILAEDKH  ++++L+ +   +   GG+ QN+ + AQ+M+  P ++  + GC+G DK+G++LK+   EA V   Y     QPTG C   ITG +RS+  +LAAAN YK E HL+  + W LVEKA+V Y+ G+ LTV   ++L +   A+  N+ F  ++SAPFI+QF+K+ L  V+PY D  F NETEA
Sbjct:   18 PQALRENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEA 244          
BLAST of FC931312 vs. ExPASy Swiss-Prot
Match: ADK_TOXGO (Adenosine kinase OS=Toxoplasma gondii GN=AK PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.384e-28
Identity = 73/217 (33.64%), Postives = 115/217 (53.00%), Query Frame = 3
Query:   45 LLCLENPLLDIQARGDAALLQKYELKPNDAILAEDKHMGIYEDLLNRDAKLIPGGAAQNTARGAQYMLPEQ-SVVYIGCVGKDKYGDMLKKTCEEAGVHTEYRVDETQPTGKCGVVITGHDRSMCTHLAAANEYKIEHLEQPEVW-SLVEKAQVYYVGGYHLTVCVP-AILALGEEAAAKNKTFMFSISAPFIAQFFKDQLDSVLPYTDYTFCNETE 686
            +  + NP+LD+ A   ++ L ++ LK  DA LA  + M IY  L   +   +PGG+A N+ R  Q +L +  S  Y+G +G D  G +LK+ C++ G+ T + V   Q TG C V+I   +R++CTHL A   +++     PE W +    A ++Y   Y LT     A+   G      N  F  ++SAPF  + +KD + S+L +T+  F NE E
Sbjct:   15 VFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTLDQFNPTSLPGGSALNSVRVVQKLLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLINEKERTLCTHLGACGSFRL-----PEDWTTFASGALIFYATAYTLTATPKNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEE 226          
The following BLAST results are available for this feature:
BLAST of FC931312 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
ADK_HUMAN1.712e-4844.93Adenosine kinase OS=Homo sapiens GN=ADK PE=1 SV=2[more]
ADK_TOXGO4.384e-2833.64Adenosine kinase OS=Toxoplasma gondii GN=AK PE=1 S... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34103G07EF PostHarvP1 Citrus clementina cDNA clone C34103G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931312 ID=FC931312; Name=FC931312; organism=Citrus clementina; type=EST; length=697bp
GGATCATTACTCATATCACACCGGCTGCTCCTCAAGGTTACCCTCTTCTG
TGTCTGGAGAACCCTCTCCTCGACATCCAGGCTCGTGGCGATGCCGCTCT
CTTGCAGAAGTATGAGCTGAAGCCTAATGATGCTATCCTCGCCGAGGACA
AGCACATGGGTATCTACGAGGACCTGCTTAACCGCGACGCCAAGCTGATT
CCCGGTGGTGCCGCTCAGAATACCGCTCGTGGTGCTCAGTACATGCTTCC
TGAGCAGTCCGTTGTCTACATAGGCTGTGTCGGTAAGGATAAGTATGGTG
ACATGCTCAAGAAGACTTGCGAGGAGGCTGGTGTCCACACCGAGTACCGT
GTCGATGAGACCCAGCCCACCGGTAAATGTGGTGTTGTCATCACTGGCCA
CGACCGCAGCATGTGCACCCACCTTGCTGCTGCCAATGAGTACAAGATTG
AGCACCTCGAGCAGCCCGAGGTCTGGTCTCTGGTCGAGAAGGCCCAGGTC
TACTATGTCGGTGGTTACCACCTGACTGTCTGCGTGCCCGCCATCCTCGC
CCTTGGTGAAGAGGCTGCCGCTAAGAACAAGACCTTCATGTTCTCCATCT
CTGCTCCTTTCATTGCTCAGTTCTTCAAGGACCAGTTGGATAGCGTCCTT
CCCTACACCGACTACACCTTCTGTAACGAGACTGAGGCTATTGCCTA
back to top