FC931318

Overview
NameFC931318
Unique NameFC931318
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length772
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931318 vs. ExPASy Swiss-Prot
Match: ACT1_ORYSI (Actin-1 OS=Oryza sativa subsp. indica GN=ACT1 PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 5.902e-72
Identity = 135/160 (84.38%), Postives = 139/160 (86.88%), Query Frame = 1 
Query:  262 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQXXXXXXXXXXXXXXXXLPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNICASGGVTMFPGL 741
            GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDMKEKL+Y+ALDY+Q                LPDGQVITIGAERFRCPEVLFQPS IGMEAAGIHETTYNSIMKCDVDIRKDLYGNI  SGG TMFPG+
Sbjct:  152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYDQEMETAKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGI 311
[Close]
BLAST of FC931318 vs. ExPASy Swiss-Prot
Match: ACT3_SOLTU (Actin-58 OS=Solanum tuberosum GN=AC58 PE=3 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 7.709e-72
Identity = 135/160 (84.38%), Postives = 140/160 (87.50%), Query Frame = 1 
Query:  262 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQXXXXXXXXXXXXXXXXLPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNICASGGVTMFPGL 741
            GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+KEKL+Y+ALD+EQ                LPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNI  SGG TMFPG+
Sbjct:  152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDVKEKLSYIALDFEQELETSKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGI 311
[Close]
BLAST of FC931318 vs. ExPASy Swiss-Prot
Match: ACT7_ARATH (Actin-7 OS=Arabidopsis thaliana GN=ACT7 PE=1 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 1.007e-71
Identity = 136/160 (85.00%), Postives = 139/160 (86.88%), Query Frame = 1 
Query:  262 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQXXXXXXXXXXXXXXXXLPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNICASGGVTMFPGL 741
            GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGY FTTTAEREIVRD+KEKLAYVALDYEQ                LPDGQVITIGAERFRCPEVLFQPSLIGMEA GIHETTYNSIMKCDVDIRKDLYGNI  SGG TMFPG+
Sbjct:  152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDIKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGI 311
[Close]
BLAST of FC931318 vs. ExPASy Swiss-Prot
Match: ACT6_TOBAC (Actin-103 (Fragment) OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 1.007e-71
Identity = 136/160 (85.00%), Postives = 139/160 (86.88%), Query Frame = 1 
Query:  262 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQXXXXXXXXXXXXXXXXLPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNICASGGVTMFPGL 741
            GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIVRDMKE+LAYVALDYEQ                LPDGQVITIGAERFRCPEVLFQPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYGNI  SGG TMFPG+
Sbjct:  132 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYMFTTTAEREIVRDMKEELAYVALDYEQELDTAKSSSSVEKNYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGI 291
[Close]
BLAST of FC931318 vs. ExPASy Swiss-Prot
Match: ACT2_ORYSJ (Actin-2 OS=Oryza sativa subsp. japonica GN=ACT2 PE=2 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 1.315e-71
Identity = 135/160 (84.38%), Postives = 140/160 (87.50%), Query Frame = 1 
Query:  262 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQXXXXXXXXXXXXXXXXLPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNICASGGVTMFPGL 741
            GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTT+AEREIVRD+KEKLAYVALDYEQ                LPDGQVITIGAERFRCPEV+FQPSLIGMEA GIHETTYNSIMKCDVDIRKDLYGNI  SGG TMFPG+
Sbjct:  152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYSFTTSAEREIVRDIKEKLAYVALDYEQELETAKSSSSVEKSYELPDGQVITIGAERFRCPEVMFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGI 311
[Close]
BLAST of FC931318 vs. ExPASy Swiss-Prot
Match: ACT2_ORYSI (Actin-2 OS=Oryza sativa subsp. indica GN=ACT2 PE=3 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 1.315e-71
Identity = 135/160 (84.38%), Postives = 140/160 (87.50%), Query Frame = 1 
Query:  262 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQXXXXXXXXXXXXXXXXLPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNICASGGVTMFPGL 741
            GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTT+AEREIVRD+KEKLAYVALDYEQ                LPDGQVITIGAERFRCPEV+FQPSLIGMEA GIHETTYNSIMKCDVDIRKDLYGNI  SGG TMFPG+
Sbjct:  152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYSFTTSAEREIVRDIKEKLAYVALDYEQELETAKSSSSVEKSYELPDGQVITIGAERFRCPEVMFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGI 311
[Close]
BLAST of FC931318 vs. ExPASy Swiss-Prot
Match: ACT11_ARATH (Actin-11 OS=Arabidopsis thaliana GN=ACT11 PE=1 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 1.315e-71
Identity = 134/160 (83.75%), Postives = 139/160 (86.88%), Query Frame = 1 
Query:  262 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQXXXXXXXXXXXXXXXXLPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNICASGGVTMFPGL 741
            GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTT+AEREIVRD+KEKLAY+ALDYEQ                LPDGQVITIG ERFRCPEVLFQPSL+GMEAAGIHETTYNSIMKCDVDIRKDLYGNI  SGG TMFPG+
Sbjct:  152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTSAEREIVRDVKEKLAYIALDYEQEMETANTSSSVEKSYELPDGQVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGI 311
[Close]
BLAST of FC931318 vs. ExPASy Swiss-Prot
Match: ACT8_SOLTU (Actin-79 (Fragment) OS=Solanum tuberosum PE=3 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 2.243e-71
Identity = 134/160 (83.75%), Postives = 139/160 (86.88%), Query Frame = 1 
Query:  262 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQXXXXXXXXXXXXXXXXLPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNICASGGVTMFPGL 741
            GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+KEKL+Y+ALDYEQ                LPDGQVI IGAERFRCPEVLFQPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYGNI  SGG TMFPG+
Sbjct:  132 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDVKEKLSYIALDYEQEIETAKTSSSVEKSYELPDGQVIPIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGI 291
[Close]
BLAST of FC931318 vs. ExPASy Swiss-Prot
Match: ACT2_SOLLC (Actin-51 (Fragment) OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 2.243e-71
Identity = 136/160 (85.00%), Postives = 138/160 (86.25%), Query Frame = 1 
Query:  262 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQXXXXXXXXXXXXXXXXLPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNICASGGVTMFPGL 741
            GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIVRDMKEKLAYVALDYEQ                LPDGQVITIGAERF CPEVLFQPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYGNI  SGG TMFPG+
Sbjct:  132 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQEIETARSSSSIEKNYELPDGQVITIGAERFGCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGI 291
[Close]
BLAST of FC931318 vs. ExPASy Swiss-Prot
Match: ACT1_PEA (Actin-1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 2.243e-71
Identity = 134/160 (83.75%), Postives = 140/160 (87.50%), Query Frame = 1 
Query:  262 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQXXXXXXXXXXXXXXXXLPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNICASGGVTMFPGL 741
            GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT++LMKILTERGY FTT+AEREIVRD+KEKLAYVALDYEQ                LPDGQVITIGAERFRCPEVLFQPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYGNI  SGG TMFPG+
Sbjct:  151 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTESLMKILTERGYMFTTSAEREIVRDIKEKLAYVALDYEQELETAKSSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGI 310
The following BLAST results are available for this feature:
BLAST of FC931318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 428
Match NameE-valueIdentityDescription
ACT1_ORYSI5.902e-7284.38Actin-1 OS=Oryza sativa subsp. indica GN=ACT1 PE=2... [more]
ACT3_SOLTU7.709e-7284.38Actin-58 OS=Solanum tuberosum GN=AC58 PE=3 SV=1[more]
ACT7_ARATH1.007e-7185.00Actin-7 OS=Arabidopsis thaliana GN=ACT7 PE=1 SV=1[more]
ACT6_TOBAC1.007e-7185.00Actin-103 (Fragment) OS=Nicotiana tabacum PE=3 SV=... [more]
ACT2_ORYSJ1.315e-7184.38Actin-2 OS=Oryza sativa subsp. japonica GN=ACT2 PE... [more]
ACT2_ORYSI1.315e-7184.38Actin-2 OS=Oryza sativa subsp. indica GN=ACT2 PE=3... [more]
ACT11_ARATH1.315e-7183.75Actin-11 OS=Arabidopsis thaliana GN=ACT11 PE=1 SV=... [more]
ACT8_SOLTU2.243e-7183.75Actin-79 (Fragment) OS=Solanum tuberosum PE=3 SV=1[more]
ACT2_SOLLC2.243e-7185.00Actin-51 (Fragment) OS=Solanum lycopersicum PE=3 S... [more]
ACT1_PEA2.243e-7183.75Actin-1 OS=Pisum sativum PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC34103H01EF PostHarvP1 Citrus clementina cDNA clone C34103H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931318 ID=FC931318; Name=FC931318; organism=Citrus clementina; type=EST; length=772bp
ATAAGAAAGTAGGGAAAGGTGGCATTTAATGTGGAATAAACACAAAAAGA
AATTAAGTTATCCAATATAATTCCAGCTCGAAGGGACTAAGTTGCAAGAT
GTTCAATTGGACGGAATAACTTCACCTTTCATTTGTTCTGAAAACTTGGC
AGATGATTGAACTTCTTTTTCCCTATATTGTTATTGAAAATTGCTAATTT
GTTCACCTTTATTACTCATCTCTTGATTTTTGCATTCACCAGAAGTGTGA
TTATTTGAATAGGTATTGTGTTGGATTCTGGTGATGGTGTGAGCCACACA
GTACCCATTTATGAAGGCTATGCCCTCCCTCATGCCATCCTTCGGTTGGA
CCTTGCTGGTCGTGATCTAACAGACGCCTTGATGAAGATCCTCACTGAGA
GAGGGTATTCTTTTACCACGACTGCTGAGCGGGAAATTGTCCGTGACATG
AAGGAAAAACTTGCGTATGTTGCCCTTGATTATGAGCAAGAGTTGGAGGC
TGCAAAAAGCAGCTCTGCAGTTGAGAAGAGTTATGAGTTGCCTGACGGGC
AGGTGATTACAATTGGAGCTGAGAGGTTCCGCTGCCCAGAAGTACTTTTC
CAGCCATCTTTGATTGGAATGGAAGCAGCTGGAATTCATGAAACCACTTA
CAATTCCATAATGAAGTGTGATGTTGATATCAGGAAAGATCTGTATGGAA
ACATTTGTGCTAGTGGTGGGGTCACTATGTTTCCTGGATTGCTGATCGGA
TGAGCAGGAAATTACTGCCCTT
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