FC931318

Overview
NameFC931318
Unique NameFC931318
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length772
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931318 vs. ExPASy Swiss-Prot
Match: ACT4_SOLTU (Actin-65 (Fragment) OS=Solanum tuberosum PE=3 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 7.977e-69
Identity = 132/161 (81.99%), Postives = 138/161 (85.71%), Query Frame = 1
Query:  262 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQ-XXXXXXXXXXXXXXXXLPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNICASGGVTMFPGL 741
            GIV+ SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+KEKL+Y+A DYEQ                 LPDGQVITIGAERFRCPEVLFQPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYGNI  SGG TMFPG+
Sbjct:  132 GIVMGSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDVKEKLSYIAPDYEQEIIDTTSSSKTVEKTYELPDGQVITIGAERFRCPEVLFQPSIIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGI 292          
BLAST of FC931318 vs. ExPASy Swiss-Prot
Match: ACT1_DICDI (Major actin OS=Dictyostelium discoideum GN=act1 PE=1 SV=2)

HSP 1 Score: 260.381 bits (664), Expect = 7.977e-69
Identity = 128/160 (80.00%), Postives = 136/160 (85.00%), Query Frame = 1
Query:  262 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQXXXXXXXXXXXXXXXXLPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNICASGGVTMFPGL 741
            GIV+DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD +MKILTERGYSFTTTAEREIVRD+KEKLAYVALD+E                 LPDGQVITIG ERFRCPE LFQPS +GME+AGIHETTYNSIMKCDVDIRKDLYGN+  SGG TMFPG+
Sbjct:  151 GIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMQTAASSSALEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGI 310          
BLAST of FC931318 vs. ExPASy Swiss-Prot
Match: ACT10_DICDI (Actin-10 OS=Dictyostelium discoideum GN=act10 PE=1 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 7.977e-69
Identity = 128/160 (80.00%), Postives = 136/160 (85.00%), Query Frame = 1
Query:  262 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQXXXXXXXXXXXXXXXXLPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNICASGGVTMFPGL 741
            GIV+DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD +MKILTERGYSFTTTAEREIVRD+KEKLAYVALD+E                 LPDGQVITIG ERFRCPE LFQPS +GME+AGIHETTYNSIMKCDVDIRKDLYGN+  SGG TMFPG+
Sbjct:  151 GIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMQTAASSSALEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGI 310          
BLAST of FC931318 vs. ExPASy Swiss-Prot
Match: ACT8_ARATH (Actin-8 OS=Arabidopsis thaliana GN=ACT8 PE=1 SV=2)

HSP 1 Score: 259.996 bits (663), Expect = 1.042e-68
Identity = 129/160 (80.62%), Postives = 137/160 (85.62%), Query Frame = 1
Query:  262 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQXXXXXXXXXXXXXXXXLPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNICASGGVTMFPGL 741
            GIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIVRD+KEKL++VA+DYEQ                LPDGQVITIGAERFRCPEVLFQPS +GMEAAGIHETTYNSIMKCDVDIRKDLYGNI  SGG TMF G+
Sbjct:  152 GIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGI 311          
BLAST of FC931318 vs. ExPASy Swiss-Prot
Match: ACT7_SOLTU (Actin-75 OS=Solanum tuberosum GN=AC75 PE=3 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 1.042e-68
Identity = 130/158 (82.28%), Postives = 136/158 (86.08%), Query Frame = 1
Query:  268 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQXXXXXXXXXXXXXXXXLPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNICASGGVTMFPGL 741
            VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT+ L KILTERGYSFTT+AE+EIVRDMKEKLAY+ALD+EQ                LPDGQVITIGAERFRCPEVLFQPS IGMEAAGIHETTYNSIMKCDVDIRKDLYGNI  SGG TMFPG+
Sbjct:  154 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEHLAKILTERGYSFTTSAEKEIVRDMKEKLAYIALDFEQELDMVKSSSSVEKNFELPDGQVITIGAERFRCPEVLFQPSTIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGI 311          
BLAST of FC931318 vs. ExPASy Swiss-Prot
Match: ACT2_ARATH (Actin-2 OS=Arabidopsis thaliana GN=ACT2 PE=1 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 1.042e-68
Identity = 129/160 (80.62%), Postives = 137/160 (85.62%), Query Frame = 1
Query:  262 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQXXXXXXXXXXXXXXXXLPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNICASGGVTMFPGL 741
            GIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIVRD+KEKL++VA+DYEQ                LPDGQVITIGAERFRCPEVLFQPS +GMEAAGIHETTYNSIMKCDVDIRKDLYGNI  SGG TMF G+
Sbjct:  152 GIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGI 311          
BLAST of FC931318 vs. ExPASy Swiss-Prot
Match: ACT7_TOBAC (Actin-104 (Fragment) OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.361e-68
Identity = 132/160 (82.50%), Postives = 136/160 (85.00%), Query Frame = 1
Query:  262 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQXXXXXXXXXXXXXXXXLPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNICASGGVTMFPGL 741
            GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR LTD LMKILTERGY FTT+AEREIVRD+KEKLAYVALD+EQ                LPDGQVITIGAERFRCPEVLFQPS IGMEAAGIHETTYNSIMK DVDIRKDLYGNI  SGG TMFPG+
Sbjct:  132 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRGLTDYLMKILTERGYMFTTSAEREIVRDVKEKLAYVALDFEQELETAKSSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKSDVDIRKDLYGNIVLSGGSTMFPGI 291          
BLAST of FC931318 vs. ExPASy Swiss-Prot
Match: ACT_HYDAT (Actin, non-muscle 6.2 OS=Hydra attenuata PE=3 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.777e-68
Identity = 129/160 (80.62%), Postives = 135/160 (84.38%), Query Frame = 1
Query:  262 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQXXXXXXXXXXXXXXXXLPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNICASGGVTMFPGL 741
            GIVLDSGDGVSHTVPIYEGYALPHAI+RLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+KEKL+YVALD+EQ                LPDGQVITIG ERFRCPE LFQPS IGME+AGIHETTYNSIMKCDVDIRKDLY N   SGG TMFPG+
Sbjct:  151 GIVLDSGDGVSHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLSYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMFPGI 310          
BLAST of FC931318 vs. ExPASy Swiss-Prot
Match: ACT22_DICDI (Putative actin-22 OS=Dictyostelium discoideum GN=act22 PE=3 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 2.321e-68
Identity = 127/160 (79.38%), Postives = 136/160 (85.00%), Query Frame = 1
Query:  262 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQXXXXXXXXXXXXXXXXLPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNICASGGVTMFPGL 741
            GIV+DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD +MKILTERGYSFTTTAEREIVRD+KEKLAYVALD+E                 LPDGQVITIG ERFRCPE LFQPS +GME+AGIHETT+NSIMKCDVDIRKDLYGN+  SGG TMFPG+
Sbjct:  151 GIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTFNSIMKCDVDIRKDLYGNVVLSGGTTMFPGI 310          
BLAST of FC931318 vs. ExPASy Swiss-Prot
Match: ACT3_PODCA (Actin-3 OS=Podocoryne carnea GN=ACT3 PE=3 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 3.031e-68
Identity = 128/160 (80.00%), Postives = 135/160 (84.38%), Query Frame = 1
Query:  262 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQXXXXXXXXXXXXXXXXLPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNICASGGVTMFPGL 741
            GIVLDSGDGVSHTVPIYEGYALPHAI+RLDLAGRDLTD +MKILTERGYSFTTTAEREIVRD+KEKLAYVALD+EQ                LPDGQVITIG ERFRCPE LFQP+ IGME+AGIHETTYNSIMKCDVDIRKDLY N   SGG TMFPG+
Sbjct:  151 GIVLDSGDGVSHTVPIYEGYALPHAIIRLDLAGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQEMQTAVTSSSLEKSYELPDGQVITIGNERFRCPETLFQPAFIGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMFPGI 310          
The following BLAST results are available for this feature:
BLAST of FC931318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 428
Match NameE-valueIdentityDescription
ACT4_SOLTU7.977e-6981.99Actin-65 (Fragment) OS=Solanum tuberosum PE=3 SV=1[more]
ACT1_DICDI7.977e-6980.00Major actin OS=Dictyostelium discoideum GN=act1 PE... [more]
ACT10_DICDI7.977e-6980.00Actin-10 OS=Dictyostelium discoideum GN=act10 PE=1... [more]
ACT8_ARATH1.042e-6880.63Actin-8 OS=Arabidopsis thaliana GN=ACT8 PE=1 SV=2[more]
ACT7_SOLTU1.042e-6882.28Actin-75 OS=Solanum tuberosum GN=AC75 PE=3 SV=1[more]
ACT2_ARATH1.042e-6880.63Actin-2 OS=Arabidopsis thaliana GN=ACT2 PE=1 SV=1[more]
ACT7_TOBAC1.361e-6882.50Actin-104 (Fragment) OS=Nicotiana tabacum PE=3 SV=... [more]
ACT_HYDAT1.777e-6880.63Actin, non-muscle 6.2 OS=Hydra attenuata PE=3 SV=1[more]
ACT22_DICDI2.321e-6879.38Putative actin-22 OS=Dictyostelium discoideum GN=a... [more]
ACT3_PODCA3.031e-6880.00Actin-3 OS=Podocoryne carnea GN=ACT3 PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC34103H01EF PostHarvP1 Citrus clementina cDNA clone C34103H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931318 ID=FC931318; Name=FC931318; organism=Citrus clementina; type=EST; length=772bp
ATAAGAAAGTAGGGAAAGGTGGCATTTAATGTGGAATAAACACAAAAAGA
AATTAAGTTATCCAATATAATTCCAGCTCGAAGGGACTAAGTTGCAAGAT
GTTCAATTGGACGGAATAACTTCACCTTTCATTTGTTCTGAAAACTTGGC
AGATGATTGAACTTCTTTTTCCCTATATTGTTATTGAAAATTGCTAATTT
GTTCACCTTTATTACTCATCTCTTGATTTTTGCATTCACCAGAAGTGTGA
TTATTTGAATAGGTATTGTGTTGGATTCTGGTGATGGTGTGAGCCACACA
GTACCCATTTATGAAGGCTATGCCCTCCCTCATGCCATCCTTCGGTTGGA
CCTTGCTGGTCGTGATCTAACAGACGCCTTGATGAAGATCCTCACTGAGA
GAGGGTATTCTTTTACCACGACTGCTGAGCGGGAAATTGTCCGTGACATG
AAGGAAAAACTTGCGTATGTTGCCCTTGATTATGAGCAAGAGTTGGAGGC
TGCAAAAAGCAGCTCTGCAGTTGAGAAGAGTTATGAGTTGCCTGACGGGC
AGGTGATTACAATTGGAGCTGAGAGGTTCCGCTGCCCAGAAGTACTTTTC
CAGCCATCTTTGATTGGAATGGAAGCAGCTGGAATTCATGAAACCACTTA
CAATTCCATAATGAAGTGTGATGTTGATATCAGGAAAGATCTGTATGGAA
ACATTTGTGCTAGTGGTGGGGTCACTATGTTTCCTGGATTGCTGATCGGA
TGAGCAGGAAATTACTGCCCTT
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