Homology
BLAST of FC931322 vs. ExPASy Swiss-Prot
Match:
RS13_METTH (30S ribosomal protein S13P OS=Methanobacterium thermoautotrophicum GN=rps13p PE=3 SV=1)
HSP 1 Score: 118.242 bits (295), Expect = 4.363e-26
Identity = 52/128 (40.62%), Postives = 86/128 (67.19%), Query Frame = 1
Query: 103 EDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 486
E+F+H++R+ ++DG + + ALTSIKG+G+ L+ + A D+N+R G LS E++ L + NP ++ IP W +NR+ DY+ G+ ++ + L+M LR+DL R++K R+++G RH GL VRGQ
Sbjct: 3 EEFKHMVRIARKDIDGNKTMENALTSIKGVGKALSRAIIMSAGYDLNQRIGYLSDEEIERLEEAIKNPAKYNIPSWMINRRNDYETGEDKHLIESDLEMCLREDLNRMRKTRSYKGRRHELGLPVRGQ 130
BLAST of FC931322 vs. ExPASy Swiss-Prot
Match:
RS13_METS3 (30S ribosomal protein S13P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps13p PE=3 SV=1)
HSP 1 Score: 117.857 bits (294), Expect = 5.698e-26
Identity = 53/128 (41.41%), Postives = 87/128 (67.97%), Query Frame = 1
Query: 103 EDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 486
+DF+H++R+ +VDG + I ALT IKG+G L+ +C+ D+D + G ++ ++ + ++ NP++F IP+W LNR++DY+ G+ ++ + LDM LRDDL R+KK R+++G RH GL VRGQ
Sbjct: 3 DDFKHLVRISRKDVDGNKTIEQALTEIKGVGISLSTTMCRTLDLDSEAQIGYIADEDVLKIEEILENPQKFNIPNWMLNRREDYETGENIHLIESDLDMTLRDDLNRMKKTRSYKGRRHEAGLPVRGQ 130
BLAST of FC931322 vs. ExPASy Swiss-Prot
Match:
RS13_PYRHO (30S ribosomal protein S13P OS=Pyrococcus horikoshii GN=rps13p PE=3 SV=1)
HSP 1 Score: 114.39 bits (285), Expect = 6.300e-25
Identity = 56/145 (38.62%), Postives = 90/145 (62.07%), Query Frame = 1
Query: 106 DFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 540
DF+HI+RV ++DG +++ +ALT+IKG+G A +VC+ A +D +AG L+ ++ + ++ +P IP W +NR KDY+ GK +++ LDM +R+D+ RL++IR +RG+RH GL VRGQ SKK+
Sbjct: 3 DFRHIVRVAGVDLDGNKQLRWALTAIKGVGINFATMVCRVAGLDPFMKAGYLTDEQVKKIEEILQDPVSHGIPRWAVNRPKDYETGKDLHLITAKLDMAIREDIMRLRRIRAYRGIRHELGLPVRGQRTRSNFRRGQTVGVSKKK 147
BLAST of FC931322 vs. ExPASy Swiss-Prot
Match:
RS13_METKA (30S ribosomal protein S13P OS=Methanopyrus kandleri GN=rps13p PE=3 SV=1)
HSP 1 Score: 112.464 bits (280), Expect = 2.394e-24
Identity = 54/133 (40.60%), Postives = 89/133 (66.92%), Query Frame = 1
Query: 94 VANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVA--NPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 486
+A+++ + I+R+ + ++DG +K+ +ALT IKGIG R+A +C++ +D K+ GELS E++ + + + + IP W NRQKDY+ G+ +V L+M ++ D++RLKKIR +RG+RH GL VRGQ
Sbjct: 1 MADDEVKPIVRIADVDLDGHKKVPYALTGIKGIGIRMAYAICRELGLDEEKKLGELSDEEIERIEEEIKKLSEGESNIPSWMYNRQKDYETGEDMHLVGAELEMTVKQDIDRLKKIRAYRGIRHELGLPVRGQ 133
BLAST of FC931322 vs. ExPASy Swiss-Prot
Match:
RS13_PYRFU (30S ribosomal protein S13P OS=Pyrococcus furiosus GN=rps13p PE=3 SV=1)
HSP 1 Score: 112.079 bits (279), Expect = 3.127e-24
Identity = 53/127 (41.73%), Postives = 87/127 (68.50%), Query Frame = 1
Query: 106 DFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 486
+F+HI+RV ++DG +++ +ALT+IKGIG A +VC+ A +D +AG L+ ++ + ++A+P IP W +NR KDY+ G+ +++ LDM +R+D+ RL++IR +RG+RH GL VRGQ
Sbjct: 3 NFRHIVRVAGVDLDGNKQLRWALTAIKGIGINFATMVCRVAGLDPFMKAGYLTDEQVKKIEEILADPVAHGIPRWAVNRPKDYETGRDLHLITAKLDMAIREDIMRLRRIRAYRGIRHELGLPVRGQ 129
BLAST of FC931322 vs. ExPASy Swiss-Prot
Match:
RS13_PYRAB (30S ribosomal protein S13P OS=Pyrococcus abyssi GN=rps13p PE=3 SV=1)
HSP 1 Score: 111.694 bits (278), Expect = 4.083e-24
Identity = 52/127 (40.94%), Postives = 86/127 (67.72%), Query Frame = 1
Query: 106 DFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 486
DF+HI+RV ++DG +++ +ALT+IKG+G A +VC+ A +D +AG L+ ++ + ++ +P IP W +NR KDY+ G+ +++ LDM +R+D+ RL++IR +RG+RH GL VRGQ
Sbjct: 3 DFRHIVRVAGVDLDGNKQLRWALTAIKGVGINFATMVCRVAGLDPFMKAGYLTDEQVKKIEEILQDPVAHGIPRWAVNRPKDYETGRDLHLITAKLDMAIREDIMRLRRIRAYRGIRHELGLPVRGQ 129
BLAST of FC931322 vs. ExPASy Swiss-Prot
Match:
RS13_HYPBU (30S ribosomal protein S13P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps13p PE=3 SV=1)
HSP 1 Score: 111.694 bits (278), Expect = 4.083e-24
Identity = 54/131 (41.22%), Postives = 85/131 (64.89%), Query Frame = 1
Query: 94 VANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 486
++ + +++I+R+L T++ G K+ + L +KGIG LA +C+ +D NKR G L+ AE++ + +ANP IP W LNR+KDY+ GK +V L ++ D+ER K+IR+ RG+RH GL+VRGQ
Sbjct: 2 LSEQQYRYIVRILGTDIPGDLKVPYGLALVKGIGVNLAYALCRLLGIDPNKRIGFLTDAEIEKIEKAMANPLAIGIPVWMLNRRKDYETGKDLHLVGADLIYYVKRDIEREKRIRSWRGIRHALGLKVRGQ 132
BLAST of FC931322 vs. ExPASy Swiss-Prot
Match:
RS13_PICTO (30S ribosomal protein S13P OS=Picrophilus torridus GN=rps13p PE=3 SV=1)
HSP 1 Score: 110.923 bits (276), Expect = 6.965e-24
Identity = 51/129 (39.53%), Postives = 85/129 (65.89%), Query Frame = 1
Query: 100 NEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 486
NE+FQ+I+R+ N +++G++ + AL +KGIG RL+ + KK D+D ++R GEL +++ L + IP W N ++D GK +VSN LD+++ DD+ +KK+R+++G+RH GL+VRGQ
Sbjct: 8 NENFQYIVRIANKDLNGERPLKLALADLKGIGLRLSETIAKKLDLDPDQRIGELGEDKIEELRKYIEGKVYDGIPYWMYNHRRDITTGKDFNLVSNDLDLQINDDINLMKKMRSYKGIRHERGLKVRGQ 136
BLAST of FC931322 vs. ExPASy Swiss-Prot
Match:
RS13_METJA (30S ribosomal protein S13P OS=Methanocaldococcus jannaschii GN=rps13p PE=3 SV=2)
HSP 1 Score: 110.153 bits (274), Expect = 1.188e-23
Identity = 52/129 (40.31%), Postives = 84/129 (65.12%), Query Frame = 1
Query: 100 NEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 486
N +F++++RV T++DG +K++ AL I G+G +A + + A +D NK AG L+ E+ + V+A+P +F IP W NR+KDY G+ V+ + L + ++D+ RLK+IR +RG+RH GL RGQ
Sbjct: 3 NSEFKYLIRVSRTDLDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPNKLAGYLTEEEVKKIEEVLADPAKFGIPSWMFNRRKDYVTGEDKHVIESDLMIIKQEDINRLKRIRCYRGIRHELGLPCRGQ 131
BLAST of FC931322 vs. ExPASy Swiss-Prot
Match:
RS13_STAMF (30S ribosomal protein S13P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rps13p PE=3 SV=1)
HSP 1 Score: 108.612 bits (270), Expect = 3.457e-23
Identity = 52/145 (35.86%), Postives = 84/145 (57.93%), Query Frame = 1
Query: 106 DFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 540
++++I+R+ T++DG K ++ L IKG+G LA +C++ +D R G L+ E+ + +++NP + IP W LNR+KDY GK ++ L ++ D+ER KKI++ RG+RH GL+VRGQ KKR
Sbjct: 6 NYRYIVRIAGTDIDGSLKTVYGLAEIKGVGVNLAYGICRRLGIDPEMRIGYLTDEEIKRIEDLLSNPSAYDIPSWMLNRRKDYVTGKDMHLIGAELIFYVKQDIEREKKIKSWRGIRHALGLKVRGQRTRTTGRLGLTVGVRKKR 150
The following BLAST results are available for this feature:
BLAST of FC931322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (
BLAST: Citrus ESTs to SwissProt )
Total hits: 60
100 200 300 400 500 600 700 Expect = 4.36e-26 / Id = 40.63 Expect = 5.70e-26 / Id = 41.41 Expect = 6.30e-25 / Id = 38.62 Expect = 2.39e-24 / Id = 40.60 Expect = 3.13e-24 / Id = 41.73 Expect = 4.08e-24 / Id = 40.94 Expect = 4.08e-24 / Id = 41.22 Expect = 6.97e-24 / Id = 39.53 Expect = 1.19e-23 / Id = 40.31 Expect = 3.46e-23 / Id = 35.86 Sequence RS13_METTH RS13_METS3 RS13_PYRHO RS13_METKA RS13_PYRFU RS13_PYRAB RS13_HYPBU RS13_PICTO RS13_METJA RS13_STAMF
Match Name E-value Identity Description
RS13_METTH 4.363e-26 40.63 30S ribosomal protein S13P OS=Methanobacterium the... [more]
RS13_METS3 5.698e-26 41.41 30S ribosomal protein S13P OS=Methanobrevibacter s... [more]
RS13_PYRHO 6.300e-25 38.62 30S ribosomal protein S13P OS=Pyrococcus horikoshi... [more]
RS13_METKA 2.394e-24 40.60 30S ribosomal protein S13P OS=Methanopyrus kandler... [more]
RS13_PYRFU 3.127e-24 41.73 30S ribosomal protein S13P OS=Pyrococcus furiosus ... [more]
RS13_PYRAB 4.083e-24 40.94 30S ribosomal protein S13P OS=Pyrococcus abyssi GN... [more]
RS13_HYPBU 4.083e-24 41.22 30S ribosomal protein S13P OS=Hyperthermus butylic... [more]
RS13_PICTO 6.965e-24 39.53 30S ribosomal protein S13P OS=Picrophilus torridus... [more]
RS13_METJA 1.188e-23 40.31 30S ribosomal protein S13P OS=Methanocaldococcus j... [more]
RS13_STAMF 3.457e-23 35.86 30S ribosomal protein S13P OS=Staphylothermus mari... [more]
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