FC931327
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931327 vs. ExPASy Swiss-Prot
Match: RLA0_LEIIN (60S acidic ribosomal protein P0 OS=Leishmania infantum GN=LIPO-A PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.729e-25 Identity = 66/175 (37.71%), Postives = 94/175 (53.71%), Query Frame = 1 Query: 205 KIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIP-------LLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALL 708 K Y+ +L L +Y+ +L DNV S Q+ ++ R LR + +MGK T+ + + A+ + LL GN GLIFT + ARVG ++P DV+V G+TG++P+QTSFFQ LNI TKI KG VEI+T +++ GDKV +S A LL Sbjct: 8 KREYEERLVDCLTKYSCVLFVGMDNVRSQQVHDVGRALRAKAEFMMGKKTLQGKIVEKRAQAKDASPEAKHFNDQCEEYNLLSGNTGLIFTNNAVQEITSVLDAHRVKRAARVGAISPCDVIVAAGSTGMEPTQTSFFQALNIATKIAKGMVEIVTEKKVLSVGDKVDNSTATLL 182
BLAST of FC931327 vs. ExPASy Swiss-Prot
Match: RLA0_ENCCU (60S acidic ribosomal protein P0 OS=Encephalitozoon cuniculi GN=RPP0 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.426e-23 Identity = 67/178 (37.64%), Postives = 102/178 (57.30%), Query Frame = 1 Query: 175 MVVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALL 708 M K +K K++ Y+ + +L E Y++ + +NV S QL++I+R G++ +LMGKN+ ++R I G + L++G+V +F KG+ A A+VG VA DV V TG+ P +TS+FQ L I TKI KG VEII+P +++ +GDKVG S+A LL Sbjct: 25 MTRKDAKERKELTYE-RARKLFETYSRFALVKIENVVSTQLKDIKRQWGGNAELLMGKNSAIRRAIA----DLGKPELSGVYDLVKGDVCFVFFKGNARDIKKAIDENVREACAKVGNVAQRDVWVESCITGMTPDKTSYFQALGIATKITKGKVEIISPYKVLSEGDKVGPSQANLL 197
BLAST of FC931327 vs. ExPASy Swiss-Prot
Match: RLA0_HALSA (Acidic ribosomal protein P0 homolog OS=Halobacterium salinarium GN=rplP0 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.291e-14 Identity = 49/164 (29.88%), Postives = 82/164 (50.00%), Query Frame = 1 Query: 220 AKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALL 708 A+L LLE Y + V + S QLQ++RRGL G + + M +NT++ R + E+ G+ L ++G VGL+ T + AP G VAP D+VVP G+TG+DP Q + +I +G+++++ + +G+ V + +L Sbjct: 21 AELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVRAL----EEAGD-GLDTLTEYVEGEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDIVVPEGDTGIDPGPFVGELQTIGANARIQEGSIQVLDDSVVTEEGETVSDDVSNVL 179
BLAST of FC931327 vs. ExPASy Swiss-Prot
Match: RLA0_HALS3 (Acidic ribosomal protein P0 homolog OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rplP0 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.291e-14 Identity = 49/164 (29.88%), Postives = 82/164 (50.00%), Query Frame = 1 Query: 220 AKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALL 708 A+L LLE Y + V + S QLQ++RRGL G + + M +NT++ R + E+ G+ L ++G VGL+ T + AP G VAP D+VVP G+TG+DP Q + +I +G+++++ + +G+ V + +L Sbjct: 21 AELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVRAL----EEAGD-GLDTLTEYVEGEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDIVVPEGDTGIDPGPFVGELQTIGANARIQEGSIQVLDDSVVTEEGETVSDDVSNVL 179
BLAST of FC931327 vs. ExPASy Swiss-Prot
Match: RLA0_METVO (Acidic ribosomal protein P0 homolog (Fragment) OS=Methanococcus voltae GN=rplP0 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.406e-14 Identity = 51/162 (31.48%), Postives = 78/162 (48.15%), Query Frame = 1 Query: 226 LCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALL 708 L +LL+ I + V S QLQ IR +R + M +NT+MKR I AE+TGN +F LI ++ LI T+ + AP + G AP D+ + G+TG+ P S + + +P I KG + I + ++GD V + A +L Sbjct: 21 LKELLKSGNVIALIDMMEVPSVQLQEIRDTIRDSMTLKMSRNTLMKRAIEEVAEETGNPSFTKLIDCMEKGAALIATEMNPFKLYKTLNESKSPAPIKAGATAPCDIEIKAGSTGMPPGPFLSELKAVGLPAAIEKGKIGIKEDTIVAKEGDVVSAKLAVVL 182
BLAST of FC931327 vs. ExPASy Swiss-Prot
Match: RLA0_THESM (Acidic ribosomal protein P0 homolog OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rplP0 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.864e-13 Identity = 52/175 (29.71%), Postives = 85/175 (48.57%), Query Frame = 1 Query: 187 ASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALL 708 A AE K +L +LL++Y I + +V + L +R LR +V+ + +NT+++ ++ A++ ++ LI +QG G++ TK + APA+ G AP DVVVP G T L P Q L IP +I KG V I +++ G+ + A +L Sbjct: 2 AHVAEWKKKEVEELTKLLQDYPVIALVDVADVPAYPLSKMRESLRDKAVLRVSRNTLIELALKKAAQELNDSNLEKLIEHIQGGTGILVTKINPFKLYKFLEESKKPAPAKAGAPAPRDVVVPAGPTPLSPGPLVGEMQALGIPARIEKGKVSIQKDTVVLKAGEIITPQLANIL 176
BLAST of FC931327 vs. ExPASy Swiss-Prot
Match: RLA0_THEON (Acidic ribosomal protein P0 homolog OS=Thermococcus onnurineus (strain NA1) GN=rplP0 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.434e-13 Identity = 49/175 (28.00%), Postives = 83/175 (47.43%), Query Frame = 1 Query: 187 ASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALL 708 A AE K +L +++ Y I + NV + L +R LRG +++ + +NT+++ I+ A++ G LI +QG G++ T+ + APA+ G+ P DVV+P G T + P Q L IP +I KG V I +++ G+ + A +L Sbjct: 2 AHVAEWKKKEVEELTNIIKSYPVIALVDVANVPAYPLSKMREKLRGKALLRVSRNTLIELAIKRAAQELGKPELEKLIDHIQGGAGILATEMNPFKLYKLLEESKTPAPAKPGVPVPRDVVIPAGPTSISPGPLVGEMQALGIPARIEKGKVSIQKDYTVLKAGEVITEQLARIL 176
BLAST of FC931327 vs. ExPASy Swiss-Prot
Match: RLA0_NATPD (Acidic ribosomal protein P0 homolog OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rplP0 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.179e-13 Identity = 46/163 (28.22%), Postives = 80/163 (49.08%), Query Frame = 1 Query: 223 KLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALL 708 +L LE Y + V + S QLQ++RR L G + + + +NT+M+R + + G L+ ++G VGLI T + AP G VAP D+V+P G+TG+DP Q + +I G+++++ ++ G++V S + +L Sbjct: 21 ELVAFLERYESVGVVDITGIPSRQLQDMRRDLHGTAALRVSRNTLMERALNEGGDGLG-----ELVEHVEGQVGLIGTNDNPFGLYQQLEESKTPAPINAGEVAPNDIVIPEGDTGVDPGPFVGDLQQVGANARIEGGSIKVVEDSTVLSAGEEVSSDLSNVL 178
BLAST of FC931327 vs. ExPASy Swiss-Prot
Match: RLA0_METMP (Acidic ribosomal protein P0 homolog OS=Methanococcus maripaludis GN=rplP0 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.423e-13 Identity = 49/162 (30.25%), Postives = 78/162 (48.15%), Query Frame = 1 Query: 226 LCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALL 708 L +LL+ I + V + QLQ IR +R + M +NT+MKR I AE+TGN F L+ + +I T+ + AP + G +AP D+ V G+TG+ P S + + IP I+KG + I ++++G+ V A +L Sbjct: 21 LKELLKSSNIIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLMKRAIEEVAEETGNPEFAKLVDYMDKGAAIIATEMNPFKLYKTLDESKSPAPVKGGAIAPCDIEVKAGSTGMPPGPFLSELKAVGIPAAIDKGKIGIKEDKIVVKEGEVVSQKLAVVL 182
BLAST of FC931327 vs. ExPASy Swiss-Prot
Match: RLA0_METM5 (Acidic ribosomal protein P0 homolog OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rplP0 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.082e-13 Identity = 47/162 (29.01%), Postives = 79/162 (48.77%), Query Frame = 1 Query: 226 LCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALL 708 L +LL+ + I + V + QLQ IR +R + M +NT+MKR I AE+TGN F L+ + +I T+ + AP + G VAP D+ + G+TG+ P S + + +P I+KG + I ++++G+ V + +L Sbjct: 21 LKELLKSSSIIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLMKRAIEEVAEETGNPEFAKLVDYMDKGAAIIATEMNPFKLYKTLDESKSPAPVKGGAVAPCDIEIKAGSTGMPPGPFLSELKAVGLPAAIDKGKIGIKEDTVVVKEGEVVSQKLSVVL 182 The following BLAST results are available for this feature:
BLAST of FC931327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931327 ID=FC931327; Name=FC931327; organism=Citrus clementina; type=EST; length=710bpback to top |