FC931327
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931327 vs. ExPASy Swiss-Prot
Match: RLA0_METM6 (Acidic ribosomal protein P0 homolog OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rplP0 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.250e-13 Identity = 51/162 (31.48%), Postives = 77/162 (47.53%), Query Frame = 1 Query: 226 LCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALL 708 L +LL+ + I + V + QLQ IR +R + M +NT+MKR I AE+TGN F L L +I T+ + AP + G AP D+ V G+TG+ P S + + IP I+KG + I +I++G+ V A +L Sbjct: 21 LKELLKSTSIIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLMKRAIEEVAEETGNPEFAKLADYLDKGAAIIATEMNPFKLFKTLDESKSPAPVKGGATAPCDIEVKAGSTGMPPGPFLSELKAVGIPAAIDKGKIGIKEDKVVIKEGEVVSQKLAVVL 182
BLAST of FC931327 vs. ExPASy Swiss-Prot
Match: RLA0_METM7 (Acidic ribosomal protein P0 homolog OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rplP0 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.208e-12 Identity = 50/162 (30.86%), Postives = 77/162 (47.53%), Query Frame = 1 Query: 226 LCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALL 708 L +LL+ + I + V + QLQ IR +R + M +NT+MKR I AE+TGN F L L +I T+ + AP + G AP D+ V G+TG+ P S + + IP I+KG + I ++++G+ V A +L Sbjct: 21 LKELLKSTSIIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLMKRAIEEVAEETGNPEFAKLADYLDKGAAIIATEMNPFKLFKTLDESKSPAPVKGGATAPCDIEVKAGSTGMPPGPFLSELKAVGIPAAIDKGKIGIKEDKVVVKEGEVVSQKLAVVL 182
BLAST of FC931327 vs. ExPASy Swiss-Prot
Match: RLA0_METKA (Acidic ribosomal protein P0 homolog OS=Methanopyrus kandleri GN=rplP0 PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.208e-12 Identity = 53/174 (30.46%), Postives = 85/174 (48.85%), Query Frame = 1 Query: 196 AEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRG-DSVVLMGKNTMMKRTIRMHAEKTGNTAFLN-LIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALL 708 AE K +L +L++EY + + + + + QLQ IR LR D+++ M +NT+M+ + EK L L+ ++G V IFT D APA+ G +AP D+VVP G T +P S Q +P +I G V I L+++G+++ A +L Sbjct: 18 AEWKRREVKELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRMSRNTLMRIALE---EKLDERPELEPLLDYIEGPVAFIFTNLDPFKLYKLLEESKASAPAKPGDIAPEDIVVPEGPTPFEPGPIVSELQQAGLPAQIQDGKVVITKDTVLVKEGEEIDEKTAEIL 188
BLAST of FC931327 vs. ExPASy Swiss-Prot
Match: RLA0_PYRKO (Acidic ribosomal protein P0 homolog OS=Pyrococcus kodakaraensis GN=rplP0 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.578e-12 Identity = 49/175 (28.00%), Postives = 81/175 (46.29%), Query Frame = 1 Query: 187 ASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALL 708 A AE K +L +++ Y I + V + L +R LRG +++ + +NT+++ I+ A++ G LI +QG ++ T+ + APA+ G V P DVV+P G T L P Q L IP +I KG V I +++ G+ + A +L Sbjct: 2 AHVAEWKKKEVEELANIIKSYPVIALVDVAGVPAYPLSKMRDKLRGKALLRVSRNTLIELAIKRAAQELGQPELEKLIDHIQGGAAILATEMNPFKLYKLLEESKTPAPAKAGAVVPKDVVIPAGPTSLAPGPLVGEMQALGIPARIEKGKVSIQKDYTVLKAGEVITEQLARIL 176
BLAST of FC931327 vs. ExPASy Swiss-Prot
Match: RLA0_METVS (Acidic ribosomal protein P0 homolog OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rplP0 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.578e-12 Identity = 47/162 (29.01%), Postives = 77/162 (47.53%), Query Frame = 1 Query: 226 LCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALL 708 L +LL+ I + V + QLQ IR +R + M +NT++KR + AE+TGN F L+ L ++ T+ + AP + G +AP D+ V G+TG+ P S + + IP I+KG + I + ++GD + A +L Sbjct: 21 LKELLKSANVIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLIKRAVEEVAEETGNPEFAKLVDYLDKGAAIVVTEMNPFKLFKTLEESKSPAPIKGGAIAPCDIEVKSGSTGMPPGPFLSELKAVGIPAAIDKGKIGIKEDKVVAKEGDVISPKLAVVL 182
BLAST of FC931327 vs. ExPASy Swiss-Prot
Match: RLA0_METTH (Acidic ribosomal protein P0 homolog OS=Methanobacterium thermoautotrophicum GN=rplP0 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.830e-12 Identity = 48/175 (27.43%), Postives = 83/175 (47.43%), Query Frame = 1 Query: 187 ASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALL 708 A AE K +L L++ Y + +A ++ + QLQ +R+ LR +++ M K T++ + + N L+ ++G LIFT + APA+ G +AP D+VVP G+TG P Q + IP KI KG + + +++ G+++ A +L Sbjct: 2 AHVAEWKKKEVQELHDLIKGYEVVGIANLADIPARQLQKMRQTLRDSALIRMSKKTLISLALEKAGRELENVDSLS--DYMEGQPALIFTDMNPFKLFKILEDSKTPAPAKPGAIAPDDIVVPKGDTGFAPGPILGELQQIGIPAKIEKGKIVVSNDHVVVKAGEEIPPKVAGIL 174
BLAST of FC931327 vs. ExPASy Swiss-Prot
Match: RLA0_HALVO (Acidic ribosomal protein P0 homolog OS=Halobacterium volcanii GN=rplP0 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.830e-12 Identity = 46/163 (28.22%), Postives = 74/163 (45.40%), Query Frame = 1 Query: 223 KLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALL 708 +L +E Y + V + S QLQ++RR L G + V M +NT++ R + N F L + G V LI T + AP G VAP D+V+P G+TG+DP Q + +I G++ + ++ +G++V A +L Sbjct: 22 ELVDFIESYESVGVVGVAGIPSRQLQSMRRELHGSAAVRMSRNTLVNRAL-----DEVNDGFEELKEYIAGQVALIGTNDNPFALFKELEASKTPAPINAGEVAPNDIVIPEGDTGVDPGPFVGELQQVGASARIMDGSIMVTEDSNVLSEGEEVSEELANVL 179
BLAST of FC931327 vs. ExPASy Swiss-Prot
Match: RLA0_METTL (Acidic ribosomal protein P0 homolog OS=Methanococcus thermolithotrophicus GN=rplP0 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.336e-11 Identity = 50/169 (29.59%), Postives = 77/169 (45.56%), Query Frame = 1 Query: 205 KIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALL 708 KI KL +LL+ + + V + QLQ IR +RG + M +NT+++R I+ AE+TGN F L + +I T + AP + G VAP D+ V G+TG+ P + + IP I KG + I + + G+ V A +L Sbjct: 14 KIEEVNKLKELLKNGQIVALVDMMEVPARQLQEIRDKIRGTMTLKMSRNTLIERAIKEVAEETGNPEFAKLADYIDKGAAIITTDMNPFKLYKTLEESKSPAPIKGGAVAPCDIEVKAGSTGMPPGPFLGELKSVGIPAAIEKGKIGIKEDKVVAKAGEVVSHKLAVVL 182
BLAST of FC931327 vs. ExPASy Swiss-Prot
Match: RLA0_METS3 (Acidic ribosomal protein P0 homolog OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rplP0 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.976e-11 Identity = 47/175 (26.86%), Postives = 84/175 (48.00%), Query Frame = 1 Query: 187 ASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALL 708 A AE K +L L+++Y I + N+ + QLQ +R+ L +V+ M K ++ + N ++L ++G V +I T+ + APA+ G +A D+V+P G+TG +P Q + IP KI+KG + + L+ G++V ++ A+ L Sbjct: 2 AHVAEWKKEEVNELKSLIDKYDVIGIVDLLNIPAKQLQEMRKSLHNKAVIRMSKKNLIDLALEDCNASKNN--IVDLSEHMEGQVAVIATEMNPFKLYKILEDSKTSAPAKPGAIATDDIVIPEGDTGFEPGPFLGELQQVGIPAKIDKGKIVVSKETVLVEAGEEVSAAVASTL 174
BLAST of FC931327 vs. ExPASy Swiss-Prot
Match: RLA0_META3 (Acidic ribosomal protein P0 homolog OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rplP0 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.076e-11 Identity = 47/169 (27.81%), Postives = 78/169 (46.15%), Query Frame = 1 Query: 205 KIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALL 708 KI L +LL+E I + V + QLQ IR +R + M +NT++KR I AE++ + F L L+ ++ T + AP + G +AP D+VV G+TG+ P + +P I+KG + I ++++G+ V A +L Sbjct: 13 KIEEVNNLKKLLKEGQVIALVDMMEVPAVQLQEIRDNIRDLMTLRMSRNTLIKRAIEELAEESNDPKFAKLAECLERGAAIVITDMNPFKLYKTLEDGKAPAPIKAGAIAPSDIVVEAGSTGMPPGPFLGELKGAGLPAVIDKGKIAIKDDTVIVKEGEVVSPKVAVVL 181 The following BLAST results are available for this feature:
BLAST of FC931327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931327 ID=FC931327; Name=FC931327; organism=Citrus clementina; type=EST; length=710bpback to top |