FC931331

Overview
NameFC931331
Unique NameFC931331
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9351 contig Ccv1_Contig9351:3..707. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_DESAA (Anthranilate phosphoribosyltransferase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=trpD PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.183e-28
Identity = 69/166 (41.57%), Postives = 97/166 (58.43%), Query Frame = 2
Query:  212 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPXEE 703
            F+EL+  ++S  DL E E    +D +++ E +   I+AF   L  KGETF E+ G AR+M + AT+++      VD  GTGGDGA+T NIST ++ + A CG  VAK             DVLEALGV +D  PE V + ++E GIGF+ +  YH AM+F  P  +
Sbjct:    2 FSELLKKIVSGQDLAEDETTTMMDAIMSGEVEVPAIAAFMAALATKGETFTELAGAARSMRRKATRIQVSSNTVVDTCGTGGDGASTFNISTTSAFVVAGCGVTVAKHGNRSVSSKCGSADVLEALGVKLDTHPEVVEQGIEEIGIGFLFAPMYHSAMRFAMPARQ 167          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_RHOP5 (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain BisA53) GN=trpD PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.545e-28
Identity = 72/162 (44.44%), Postives = 94/162 (58.02%), Query Frame = 2
Query:  212 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            F  +I  + +   LT  EA A+ D +++ EA  + + A  + LR +GET  EI G   AM      V    DAVD+VGTGGDG+ +VN+ST A+ + A CGA VAK             DVL ALGV ID+ P+ V RC+ EAGIGFM +  +HPAMK V P
Sbjct:    4 FKSIIGKVATGATLTRDEATAAFDAMMSGEATPSQMGALLMGLRVRGETVDEIAGAVSAMRAKMLTVTAPPDAVDVVGTGGDGSGSVNVSTCAAFIVAGCGAPVAKHGNRALSSRSGAADVLAALGVKIDITPDQVGRCIAEAGIGFMFAPTHHPAMKNVGP 165          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_RHOSR (Anthranilate phosphoribosyltransferase OS=Rhodococcus sp. (strain RHA1) GN=trpD PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.018e-28
Identity = 76/169 (44.97%), Postives = 104/169 (61.54%), Query Frame = 2
Query:  182 SDNTRPQTPCFNELIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKF 685
            +D  RP    +  ++  L    DL+  EA+ ++D ++++ A  A I+AF V L+ KGET  E+ GLA +M+ +A KV    D VDIVGTGGD +NTVNIST AS++ AA G +V K             DVLEALGV I+L P+ V RCV E GIGF  +  +HPA++F
Sbjct:   10 NDGVRPART-WPSVLGTLTDGRDLSVDEAKWAMDEIMSDNATSAQIAAFGVALKMKGETPEELRGLADSMLGHARKVPVDDDVVDIVGTGGDRSNTVNISTMASLVVAASGIRVVKHGNRAASSKSGGADVLEALGVKINLGPDEVARCVREVGIGFCFAPVFHPALRF 177          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_RHOPS (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain BisB5) GN=trpD PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.442e-28
Identity = 72/162 (44.44%), Postives = 93/162 (57.41%), Query Frame = 2
Query:  212 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            F  +I  + +   LT  EA ++ D +++ +A  + + A  + LR +GET  EI G    M      V+   DAVDIVGTGGDG+ +VN+ST AS + A CG  VAK             DVL ALGV ID+ PE V RCV EAGIGFM +  +HPAMK V P
Sbjct:    4 FKAIIAKVATGATLTRDEAASAFDGMMSGDATPSQMGALLMGLRVRGETVDEITGAVSTMRAKMLTVDAPADAVDIVGTGGDGSGSVNVSTCASFIVAGCGVPVAKHGNRALSSKSGAADVLNALGVRIDITPEHVGRCVTEAGIGFMFAPTHHPAMKNVGP 165          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_RHOPA (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris GN=trpD PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.667e-28
Identity = 72/162 (44.44%), Postives = 92/162 (56.79%), Query Frame = 2
Query:  212 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            F  +I  + +   LT  EA  + D +++ +A  + + A  + LR +GET  EI G    M      V    DAVDIVGTGGDG+ +VN+ST AS + A CG  VAK             DVL ALGV ID+ PE V RCV+EAGIGFM +  +HPAMK V P
Sbjct:    4 FKSIIAKVATGATLTRDEATDAFDAMMSGDATPSQMGALLMGLRVRGETVDEITGAVTTMRAKMLPVTAPADAVDIVGTGGDGSGSVNVSTCASFVVAGCGVTVAKHGNRALSSKSGAADVLAALGVKIDITPEQVGRCVNEAGIGFMFAPTHHPAMKNVGP 165          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_RHOPB (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain BisB18) GN=trpD PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.001e-27
Identity = 70/162 (43.21%), Postives = 92/162 (56.79%), Query Frame = 2
Query:  212 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            F  +I  L + V L+  E+  + D +++ EA  + + A  + LR +GET  EI G   AM     +V    DAVD+VGTGGDG+ +VN+ST AS + A  G  VAK             DVL ALGV ID+ P  V RC+ EAGIGFM +  +HPAMK V P
Sbjct:    4 FKSIIGKLATGVTLSREESAGAFDAMMSGEATPSQMGALLMALRVRGETVEEITGAVAAMRSKMLRVTAPADAVDVVGTGGDGSGSVNVSTCASFIVAGAGVPVAKHGNRALSSKSGAADVLAALGVKIDITPAEVGRCIKEAGIGFMFAPTHHPAMKNVGP 165          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_RHOOB (Anthranilate phosphoribosyltransferase OS=Rhodococcus opacus (strain B4) GN=trpD PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.001e-27
Identity = 71/147 (48.30%), Postives = 95/147 (64.63%), Query Frame = 2
Query:  248 DLTEAEAQASLDYLLNE-ADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKF 685
            DL   +A+ ++D ++++ A  A I+AF V L+ KGET  E+ GLA +M+ +A KV    D VDIVGTGGD +NTVNIST AS++ AA G +V K             DVLEALGV I+L P+ V RCV E GIGF  +  +HPA++F
Sbjct:   31 DLAVDDAKWAMDEIMSDNATSAQIAAFGVALKMKGETPEELRGLADSMLGHARKVPVDDDVVDIVGTGGDRSNTVNISTMASLVVAASGIRVVKHGNRAASSKSGGADVLEALGVKINLGPDEVARCVREVGIGFCFAPVFHPALRF 177          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_NITHX (Anthranilate phosphoribosyltransferase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=trpD PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.001e-27
Identity = 70/159 (44.03%), Postives = 90/159 (56.60%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            LI  + +   LT  EA  + D +++ EA  + +    + LR +GET  EI G   AM     +V    DAVD+VGTGGDG+ +VN+ST AS + A  G  VAK             D L ALG+ IDL PE V RCV+EAGIGFM +  +HPAMK V P
Sbjct:    7 LIGKVATGATLTREEASCAFDSMMSGEATPSQMGGLLMALRVRGETVDEITGAVAAMRSKMLRVTAPADAVDVVGTGGDGSGSVNVSTCASFIVAGAGVPVAKHGNRALSSKSGAADCLAALGIKIDLTPEQVGRCVNEAGIGFMFAPSHHPAMKNVGP 165          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_RHOPT (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain TIE-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.308e-27
Identity = 72/162 (44.44%), Postives = 92/162 (56.79%), Query Frame = 2
Query:  212 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            F  +I  + +   LT  EA  + D +++ +A  + + A  + LR +GET  EI G    M      V    DAVDIVGTGGDG+ +VN+ST AS + A CG  VAK             DVL ALGV ID+ PE V RCV+EAGIGFM +  +HPAMK V P
Sbjct:    4 FKSIIAKVATGATLTRDEATDAFDAMMSGDATPSQMGALLMGLRVRGETVDEITGAVTTMRAKMLPVTAPPDAVDIVGTGGDGSGSVNVSTCASFVVAGCGVTVAKHGNRALSSKSGAADVLAALGVKIDITPEQVGRCVNEAGIGFMFAPTHHPAMKNVGP 165          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_METMA (Anthranilate phosphoribosyltransferase OS=Methanosarcina mazei GN=trpD PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.308e-27
Identity = 70/159 (44.03%), Postives = 94/159 (59.12%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGD--AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFV 688
            E I  L    DL+  EA+A+L+ +L+ A++  I  F + L+AKGE   EIVG  R M K    ++       VD  GTGGDG NT+N+ST A+I+ AA G  VAK             DVLEALG+ +DL PE VR+ +++ GIGFM +  +HPAMK V
Sbjct:    6 EYIKKLEEGCDLSSEEAEAALEEVLSTAEDGEIETFLLALKAKGEKPQEIVGFVRGMKKAGNMIKPNTPFRIVDTCGTGGDGLNTINVSTAAAIVTAAAGVPVAKHGNRAATSMTGSSDVLEALGIKVDLSPEYVRKTIEKIGIGFMFAPVFHPAMKRV 164          
The following BLAST results are available for this feature:
BLAST of FC931331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_DESAA1.183e-2841.57Anthranilate phosphoribosyltransferase OS=Desulfat... [more]
TRPD_RHOP51.545e-2844.44Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_RHOSR2.018e-2844.97Anthranilate phosphoribosyltransferase OS=Rhodococ... [more]
TRPD_RHOPS3.442e-2844.44Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_RHOPA7.667e-2844.44Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_RHOPB1.001e-2743.21Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_RHOOB1.001e-2748.30Anthranilate phosphoribosyltransferase OS=Rhodococ... [more]
TRPD_NITHX1.001e-2744.03Anthranilate phosphoribosyltransferase OS=Nitrobac... [more]
TRPD_RHOPT1.308e-2744.44Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_METMA1.308e-2744.03Anthranilate phosphoribosyltransferase OS=Methanos... [more]

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Properties
Property NameValue
Genbank descriptionC34104A02EF PostHarvP1 Citrus clementina cDNA clone C34104A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931331 ID=FC931331; Name=FC931331; organism=Citrus clementina; type=EST; length=705bp
GAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCT
CTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTT
CGAAACTGTGGATTTACGACTGCGGGTAGTAATCCGAGATGCAGAGAATT
AACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGCCCTC
AAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGAT
TTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGC
TGATGAGGCCTTGATTAGTGCTTTTTTTGTTTTGCTCAGAGCCAAAGGAG
AAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCT
ACGAAGGTGGAAGGGCTGGGTGATGCAGTTGATATTGTGGGTACAGGAGG
TGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTG
CAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCT
GCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTT
GGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCA
TGATGTCGACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCANGTGAG
GAAAA
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