FC931331

Overview
NameFC931331
Unique NameFC931331
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_PSEPF (Anthranilate phosphoribosyltransferase OS=Pseudomonas fluorescens (strain Pf0-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.717e-24
Identity = 61/154 (39.61%), Postives = 87/154 (56.49%), Query Frame = 2
Query:  233 LISRVDLTEAEAQASL-DYLLNEADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKF 685
            ++  +DL+  E +  + + +  +  +A I AF + +R K E+  EIVG    M + A KVE   L   VD+VGTGGDGAN  N+ST +S + AA G  VAK             D+LEA G+ ++L P  V RC+D  GIGFM +  +H AMK+
Sbjct:   10 IVDHLDLSTDEMRDVMREIMTGQCTDAQIGAFMMAMRMKSESIDEIVGAVSVMRELADKVELKTLDRVVDVVGTGGDGANIFNVSTASSFVVAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPVQVARCIDNVGIGFMFAQTHHKAMKY 163          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_GEOLS (Anthranilate phosphoribosyltransferase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.717e-24
Identity = 67/161 (41.61%), Postives = 86/161 (53.42%), Query Frame = 2
Query:  248 DLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDI---------------VGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 682
            DL+E E    ++ +++ E   A I +F   LR KGET  EI G AR M + AT +    + +DI               VGTGGDG NT NIST  S + +ACG KVAK             DVLE LGV +D+ PE V RC++E GIGF+ +   H AMK
Sbjct:   14 DLSEGEMIEVMNQIMSGECTPAQIGSFITALRMKGETIAEISGAARVMRERATPIRVGRNVLDIDRDDINLDQETILDVVGTGGDGTNTFNISTTVSFIVSACGVKVAKHGNRSVSSACGSADVLEKLGVNLDVTPEQVERCINEIGIGFLFAPALHGAMK 174          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_PSESM (Anthranilate phosphoribosyltransferase OS=Pseudomonas syringae pv. tomato GN=trpD PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.773e-24
Identity = 63/153 (41.18%), Postives = 88/153 (57.52%), Query Frame = 2
Query:  233 LISRVDLTEAEAQASL-DYLLNEADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 682
            +++++DL+  E +  + + +  +  EA I AF + +R K ET  EIVG    M + A KVE   L   VDIVGTGGDGAN  N+ST ++ + +A G  VAK             D+LEA GV ++L P  V RC+D  GIGFM +  +H AMK
Sbjct:   10 VVNQLDLSTDEMRDVMREIMTGQCTEAQIGAFLMGMRMKSETIDEIVGAVSVMRELADKVELKTLDGVVDIVGTGGDGANIFNVSTASAFVISAAGCTVAKHGNRAVSGKSGSADLLEAAGVYLNLTPVQVARCIDSVGIGFMFAQSHHSAMK 162          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_PSEPG (Anthranilate phosphoribosyltransferase OS=Pseudomonas putida (strain GB-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.773e-24
Identity = 62/153 (40.52%), Postives = 86/153 (56.21%), Query Frame = 2
Query:  233 LISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 682
            ++  +DL+  E +  +  ++  +  EA I AF + +R K E+  EIVG    M + A KVE   L   VDIVGTGGDGAN  N+ST ++ + AA G  VAK             D+LEA G+ ++L P  V RC+D  GIGFM +  +H AMK
Sbjct:   10 IVGHLDLSTEEMRDVMRQIMTGQCSEAQIGAFLMGMRMKSESIDEIVGAVSVMRELADKVELKSLDGVVDIVGTGGDGANIFNVSTASAFVLAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPTQVARCIDSLGIGFMFAQSHHSAMK 162          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_POLSQ (Anthranilate phosphoribosyltransferase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.773e-24
Identity = 61/130 (46.92%), Postives = 76/130 (58.46%), Query Frame = 2
Query:  311 LISAFFVLLRAKGETFGEIVGLARAMIKYATKV--EGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            L++   V LR K ET GEI   A+ M ++AT V  +     VD+VGTGGDGA+T NIST A  +AAA GAK+AK             DVLEALG  + L  E V +C+   G GFM +  +HPAMK V P
Sbjct:   39 LVAGLLVALRTKKETVGEIAAAAQVMREFATSVHIDDRSHLVDVVGTGGDGAHTFNISTAAMFVAAAAGAKIAKHGNRSVSSKSGSADVLEALGANLALSAEQVAKCISTVGAGFMFAPNHHPAMKNVVP 168          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_PHOPR (Anthranilate phosphoribosyltransferase OS=Photobacterium profundum GN=trpD PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.773e-24
Identity = 62/164 (37.80%), Postives = 90/164 (54.88%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPXEE 703
            E+ D L ++  LT+ E+    D ++  + D  L+SA    L+ KGET  EI G A A++  A        D  DIVGTGGDGANT+NIST A+ +AAACG KVAK             D+L+  G+ + + PE  R  +DE G+ F+ + +YH  ++   P  +
Sbjct:   10 EIADKLYAQQALTQDESHVLFDAIIKGDVDPILLSAVLTALKIKGETPAEIAGAASALLANANAFPSPEYDFADIVGTGGDGANTINISTTAAFVAAACGVKVAKHGNRGVSSKSGSSDLLDKFGINLAMTPENARGALDELGVCFLFAPEYHSGVRHAMPVRQ 173          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_MOOTA (Anthranilate phosphoribosyltransferase OS=Moorella thermoacetica (strain ATCC 39073) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.773e-24
Identity = 64/156 (41.03%), Postives = 88/156 (56.41%), Query Frame = 2
Query:  224 IDCLISRVDLTEAEAQASLDYLL-NEADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKF 685
            I  +++   L+EAEA  ++D ++  EA  A I+AF   LR KGE   EI G AR+M + A  +       VD  GTGGDG  T NIST A+ + A  G  VAK             D+LEALG+ +DL P+ V RC+DE G+ F+ +  +H AMK+
Sbjct:    6 ISKVVAGQHLSEAEAAEAMDIIMAGEATPAQIAAFLTALRLKGEMVDEITGFARSMRRRAIPLTTSHPVFVDTCGTGGDGRQTFNISTTAAFVVAGAGVAVAKHGNRSVSSRCGSADMLEALGIKVDLPPDAVARCLDEVGMAFLFAPVFHGAMKY 161          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_MARMS (Anthranilate phosphoribosyltransferase OS=Marinomonas sp. (strain MWYL1) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.773e-24
Identity = 66/163 (40.49%), Postives = 89/163 (54.60%), Query Frame = 2
Query:  224 IDCLISRVDLTEAEAQASL-DYLLNEADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKF-VRPXEE 703
            I  ++ R DL+  E Q  + D +  +A  A I  F + LR KGET  EI   A+ M   ++KV   L   VD  GTGGDG N  N+ST ++ + A+ G KVAK             DVLE  G+ + LD E V RCV+E G+GFM +  +H AMK+ V P +E
Sbjct:    7 IAAVVERQDLSGGEMQVVMHDIMTGKATPAQIGGFLIGLRMKGETVEEITAAAQVMRSLSSKVHLDLEHVVDTCGTGGDGGNLFNVSTASAFVVASAGGKVAKHGGRSVSSKSGSADVLEQAGIYLGLDAEQVCRCVEEIGLGFMFAPNHHSAMKYAVGPRKE 169          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_BURPS (Anthranilate phosphoribosyltransferase OS=Burkholderia pseudomallei GN=trpD PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.773e-24
Identity = 63/130 (48.46%), Postives = 78/130 (60.00%), Query Frame = 2
Query:  311 LISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            + +A    LR K ET GEI   A  M ++A +VE   +A  VDIVGTGGDG++T NIST    +AAA GAKVAK             DVLEALGV IDL PE V   + E G+GFM +  +HPAM+ + P
Sbjct:   39 MAAAIITGLRVKKETIGEIAAAATVMREFARRVEVEDNANFVDIVGTGGDGSHTFNISTATMFVAAAAGAKVAKHGNRGVSSKSGSADVLEALGVNIDLQPEQVAASIAETGMGFMFAPNHHPAMRNIAP 168          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_BURP6 (Anthranilate phosphoribosyltransferase OS=Burkholderia pseudomallei (strain 668) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.773e-24
Identity = 63/130 (48.46%), Postives = 78/130 (60.00%), Query Frame = 2
Query:  311 LISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            + +A    LR K ET GEI   A  M ++A +VE   +A  VDIVGTGGDG++T NIST    +AAA GAKVAK             DVLEALGV IDL PE V   + E G+GFM +  +HPAM+ + P
Sbjct:   39 MAAAIITGLRVKKETIGEIAAAATVMREFARRVEVEDNANFVDIVGTGGDGSHTFNISTATMFVAAAAGAKVAKHGNRGVSSKSGSADVLEALGVNIDLQPEQVAASIAETGMGFMFAPNHHPAMRNIAP 168          
The following BLAST results are available for this feature:
BLAST of FC931331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_PSEPF6.717e-2439.61Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_GEOLS6.717e-2441.61Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_PSESM8.773e-2441.18Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_PSEPG8.773e-2440.52Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_POLSQ8.773e-2446.92Anthranilate phosphoribosyltransferase OS=Polynucl... [more]
TRPD_PHOPR8.773e-2437.80Anthranilate phosphoribosyltransferase OS=Photobac... [more]
TRPD_MOOTA8.773e-2441.03Anthranilate phosphoribosyltransferase OS=Moorella... [more]
TRPD_MARMS8.773e-2440.49Anthranilate phosphoribosyltransferase OS=Marinomo... [more]
TRPD_BURPS8.773e-2448.46Anthranilate phosphoribosyltransferase OS=Burkhold... [more]
TRPD_BURP68.773e-2448.46Anthranilate phosphoribosyltransferase OS=Burkhold... [more]

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Properties
Property NameValue
Genbank descriptionC34104A02EF PostHarvP1 Citrus clementina cDNA clone C34104A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931331 ID=FC931331; Name=FC931331; organism=Citrus clementina; type=EST; length=705bp
GAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCT
CTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTT
CGAAACTGTGGATTTACGACTGCGGGTAGTAATCCGAGATGCAGAGAATT
AACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGCCCTC
AAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGAT
TTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGC
TGATGAGGCCTTGATTAGTGCTTTTTTTGTTTTGCTCAGAGCCAAAGGAG
AAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCT
ACGAAGGTGGAAGGGCTGGGTGATGCAGTTGATATTGTGGGTACAGGAGG
TGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTG
CAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCT
GCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTT
GGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCA
TGATGTCGACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCANGTGAG
GAAAA
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