FC931331

Overview
NameFC931331
Unique NameFC931331
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9351 contig Ccv1_Contig9351:3..707. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_PSEE4 (Anthranilate phosphoribosyltransferase OS=Pseudomonas entomophila (strain L48) GN=trpD PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.496e-23
Identity = 62/153 (40.52%), Postives = 86/153 (56.21%), Query Frame = 2
Query:  233 LISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 682
            ++  +DL+  E +  +  ++  +  EA I AF + +R K E+  EIVG    M + A KVE   L   VDIVGTGGDGAN  N+ST ++ + AA G  VAK             D+LEA G+ ++L P  V RC+D  GIGFM +  +H AMK
Sbjct:   10 IVGHLDLSTEEMRDVMRQIMTGQCSEAQIGAFLMGMRMKSESIDEIVGAVSVMRELADKVELKSLDGVVDIVGTGGDGANIFNVSTASAFVIAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPVQVARCIDSLGIGFMFAQTHHSAMK 162          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_DESOH (Anthranilate phosphoribosyltransferase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=trpD PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.496e-23
Identity = 64/160 (40.00%), Postives = 86/160 (53.75%), Query Frame = 2
Query:  212 FNELIDCLISRVDLTEAEAQASL-DYLLNEADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAV-DIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKF 685
            F++ +  +I+R DL+  E      D       +A I AF   L  KGETF E+ G A AM + AT+++     V D  GTGGDGA+T NIST ++ + A  G  VAK             DVLEALGV +D  PE     V+E GIGF+ +  +H AMK+
Sbjct:    2 FSQTLSKIINRKDLSREEMDRIFSDIFSGNLTDAQIGAFMAALATKGETFEELAGAAEAMRRKATRIQAASPVVVDTCGTGGDGAHTFNISTTSAFVVAGAGICVAKHGNRSVSSKCGSADVLEALGVKLDTQPEVAEEAVNEIGIGFLFAPLFHGAMKY 161          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_CLOAB (Anthranilate phosphoribosyltransferase OS=Clostridium acetobutylicum GN=trpD PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.496e-23
Identity = 66/150 (44.00%), Postives = 91/150 (60.67%), Query Frame = 2
Query:  251 LTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            L+E EA  +++ +++ +  E  ++AF   LR KGE   EI+G ARAM ++A KVE     A+D  GTGGDG  T N+ST +SI+AAA G K+AK             DVL  LGV I+L PE V+R ++E G+ F+ +  YH AMK V P
Sbjct:   15 LSENEAYGAMNEIMDGKVSEIDMAAFLTGLRMKGEEVEEILGCARAMKEHAVKVEVNNLYAIDTCGTGGDGGKTFNVSTCSSIIAAAGGVKIAKHGNRAGSSKSGSADVLTELGVSINLKPEEVKREIEEKGMAFIFAQSYHKAMKNVAP 164          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_BURXL (Anthranilate phosphoribosyltransferase OS=Burkholderia xenovorans (strain LB400) GN=trpD PE=3 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.496e-23
Identity = 63/135 (46.67%), Postives = 78/135 (57.78%), Query Frame = 2
Query:  296 EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            E    + +A    LR K ET GEI   A  M ++A  VE   ++  VDIVGTGGDG++T NIST    ++AA GAKVAK             DVLEALGV IDL PE V   + E G+GFM +  +HPAMK + P
Sbjct:   34 ELSPVMAAAIITGLRVKKETIGEITAAATVMREFARHVEVQDNSNFVDIVGTGGDGSHTFNISTATMFVSAAAGAKVAKHGGRSVSSKSGSADVLEALGVNIDLQPEQVAASIAETGMGFMFAPNHHPAMKNIAP 168          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_RALME (Anthranilate phosphoribosyltransferase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=trpD PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.954e-23
Identity = 62/130 (47.69%), Postives = 79/130 (60.77%), Query Frame = 2
Query:  311 LISAFFVLLRAKGETFGEIVGLARAMIKYATKV--EGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            + +A    LR K ET GEI   A+ M ++A  V  +   + VDIVGTGGDG++T NIST +  +AAA GAK+AK             DVLEALGV I L PE V  C+++ GIGFM +  +HPAMK V P
Sbjct:   39 MAAAILTGLRVKKETIGEISAAAQVMREFANHVTVKDRENFVDIVGTGGDGSHTFNISTASMFVAAAAGAKIAKHGNRGVSSKSGSADVLEALGVNIMLTPEQVGECIEQTGIGFMFAPTHHPAMKNVAP 168          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_GEOUR (Anthranilate phosphoribosyltransferase OS=Geobacter uraniireducens (strain Rf4) GN=trpD PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.954e-23
Identity = 66/174 (37.93%), Postives = 92/174 (52.87%), Query Frame = 2
Query:  233 LISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVE---------------GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKF-VRPXEE 703
            ++ R DLTE+E    +D +++ EA  A I+AF   LR KGET  EI G AR M    T++                 L   +D  GTGG   NT N+ST  + + +ACG KVAK             DVLE+LGV +D+  E + RC++E GIGF+ +   H AMK+ + P +E
Sbjct:    9 VVEREDLTESEMIQVMDQVMSGEATPAQIAAFITALRMKGETVAEITGAARVMRDKVTRIRVGKNILDMDRDDINVDLETILDTCGTGGSCTNTFNVSTTVAFVVSACGVKVAKHGNRSVSSACGSADVLESLGVNLDVTQETIERCINEIGIGFLFAPALHGAMKYAIGPRKE 182          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_EUBE2 (Anthranilate phosphoribosyltransferase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=trpD PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.954e-23
Identity = 64/158 (40.51%), Postives = 89/158 (56.33%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFV 688
            E I  L+ + DLT  +    ++ ++  EA +A  +AF   L AKGET  EI   AR +  +  K     D ++IVGTGGDG+N++NIST ASI+ +A G  VAK             D LEALGV ID  P  + + + +  I F+ + KYHPAM+FV
Sbjct:    4 EAIAKLVKKEDLTAGQMNDVMEEIMTGEATDAQKAAFLTALAAKGETIDEITAAARVLRAHCEKFLNDMDVLEIVGTGGDGSNSINISTLASIIVSAAGIPVAKHGNRAASSKCGTADCLEALGVKIDAAPARMAQILKDINICFLFAQKYHPAMRFV 161          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_DIAST (Anthranilate phosphoribosyltransferase OS=Diaphorobacter sp. (strain TPSY) GN=trpD PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.954e-23
Identity = 61/135 (45.19%), Postives = 79/135 (58.52%), Query Frame = 2
Query:  296 EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            E    + +A    LR K ET GEI   A+ M +++ KV+       VDIVGTGGDGANT NIST A+ + AA GAKV+K             D +EALGV I+L P  + +C+ + GIGFM +  +HPAMK V P
Sbjct:   35 ELSPVMTAAITTGLRVKKETIGEITAAAQVMREFSHKVQVHDTKHLVDIVGTGGDGANTFNISTCATFVIAAAGAKVSKHGGRSVSSKSGSADAMEALGVHINLQPAQIAQCIGDVGIGFMFAPNHHPAMKNVAP 169          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_BURTA (Anthranilate phosphoribosyltransferase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=trpD PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.954e-23
Identity = 63/130 (48.46%), Postives = 77/130 (59.23%), Query Frame = 2
Query:  311 LISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            + +A    LR K ET GEI   A  M ++A  VE   +A  VDIVGTGGDG++T NIST    +AAA GAKVAK             DVLEALGV IDL PE V   + E G+GFM +  +HPAM+ + P
Sbjct:   39 MAAAIITGLRVKKETIGEITAAATVMREFARHVEVEDNANFVDIVGTGGDGSHTFNISTATMFVAAAAGAKVAKHGNRGVSSKSGSADVLEALGVNIDLQPEQVAASIAETGMGFMFAPNHHPAMRNIAP 168          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_ACISJ (Anthranilate phosphoribosyltransferase OS=Acidovorax sp. (strain JS42) GN=trpD PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.954e-23
Identity = 61/135 (45.19%), Postives = 79/135 (58.52%), Query Frame = 2
Query:  296 EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            E    + +A    LR K ET GEI   A+ M +++ KV+       VDIVGTGGDGANT NIST A+ + AA GAKV+K             D +EALGV I+L P  + +C+ + GIGFM +  +HPAMK V P
Sbjct:   35 ELSPVMTAAITTGLRVKKETIGEITAAAQVMREFSHKVQVHDTKHLVDIVGTGGDGANTFNISTCATFVIAAAGAKVSKHGGRSVSSKSGSADAMEALGVHINLQPAQIAQCIGDVGIGFMFAPNHHPAMKNVAP 169          
The following BLAST results are available for this feature:
BLAST of FC931331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_PSEE41.496e-2340.52Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_DESOH1.496e-2340.00Anthranilate phosphoribosyltransferase OS=Desulfoc... [more]
TRPD_CLOAB1.496e-2344.00Anthranilate phosphoribosyltransferase OS=Clostrid... [more]
TRPD_BURXL1.496e-2346.67Anthranilate phosphoribosyltransferase OS=Burkhold... [more]
TRPD_RALME1.954e-2347.69Anthranilate phosphoribosyltransferase OS=Ralstoni... [more]
TRPD_GEOUR1.954e-2337.93Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_EUBE21.954e-2340.51Anthranilate phosphoribosyltransferase OS=Eubacter... [more]
TRPD_DIAST1.954e-2345.19Anthranilate phosphoribosyltransferase OS=Diaphoro... [more]
TRPD_BURTA1.954e-2348.46Anthranilate phosphoribosyltransferase OS=Burkhold... [more]
TRPD_ACISJ1.954e-2345.19Anthranilate phosphoribosyltransferase OS=Acidovor... [more]

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Properties
Property NameValue
Genbank descriptionC34104A02EF PostHarvP1 Citrus clementina cDNA clone C34104A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931331 ID=FC931331; Name=FC931331; organism=Citrus clementina; type=EST; length=705bp
GAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCT
CTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTT
CGAAACTGTGGATTTACGACTGCGGGTAGTAATCCGAGATGCAGAGAATT
AACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGCCCTC
AAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGAT
TTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGC
TGATGAGGCCTTGATTAGTGCTTTTTTTGTTTTGCTCAGAGCCAAAGGAG
AAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCT
ACGAAGGTGGAAGGGCTGGGTGATGCAGTTGATATTGTGGGTACAGGAGG
TGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTG
CAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCT
GCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTT
GGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCA
TGATGTCGACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCANGTGAG
GAAAA
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