FC931331

Overview
NameFC931331
Unique NameFC931331
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_XANOP (Anthranilate phosphoribosyltransferase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=trpD PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.552e-23
Identity = 63/136 (46.32%), Postives = 82/136 (60.29%), Query Frame = 2
Query:  296 EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGD---AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            E  + +++A    LR K ET GEI G A  M +++ +V+ + D    VDIVGTGGDG++T NIST A  +AAA GAKVAK             D LEALG VI+L PE V   + + GIGFM +  +HP+MK V P
Sbjct:   34 EVSDMMVAAILTGLRVKKETIGEIAGAATVMREFSRRVD-VSDHQHMVDIVGTGGDGSHTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSGSADALEALGAVIELQPEQVADALAQTGIGFMYAPLHHPSMKVVAP 168          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_XANOM (Anthranilate phosphoribosyltransferase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=trpD PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.552e-23
Identity = 63/136 (46.32%), Postives = 82/136 (60.29%), Query Frame = 2
Query:  296 EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGD---AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            E  + +++A    LR K ET GEI G A  M +++ +V+ + D    VDIVGTGGDG++T NIST A  +AAA GAKVAK             D LEALG VI+L PE V   + + GIGFM +  +HP+MK V P
Sbjct:   34 EVSDMMVAAILTGLRVKKETIGEIAGAATVMREFSRRVD-VSDHQHMVDIVGTGGDGSHTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSGSADALEALGAVIELQPEQVADALAQTGIGFMYAPLHHPSMKVVAP 168          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_VIBHB (Anthranilate phosphoribosyltransferase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=trpD PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.552e-23
Identity = 61/165 (36.97%), Postives = 91/165 (55.15%), Query Frame = 2
Query:  215 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPXEE 703
            N +I  L  +  LT+ E+Q   D ++  E D  L+++    L+ KGET  EI G A+A++  A        D  DIVGTGGDG NT+NIST A+ +AAACG KVAK             D+L++ G+ + +  E  R+ VDE G+ F+ + +YH  ++   P  +
Sbjct:    6 NPIITKLYEQESLTQEESQQLFDIIIRGELDPILMASALTALKIKGETPDEIAGAAKALLANANPFPRPDYDFADIVGTGGDGHNTINISTTAAFVAAACGLKVAKHGNRSVSSKSGSSDLLDSFGINLAMSAEDTRKAVDEIGVAFLFAPQYHGGVRHAMPVRQ 170          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_THERP (Anthranilate phosphoribosyltransferase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=trpD PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.552e-23
Identity = 64/153 (41.83%), Postives = 86/153 (56.21%), Query Frame = 2
Query:  245 VDLTEA-EAQASLDYLLNEADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEG--LGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            +D+ EA EA +++  +  EA  A I+A    LR +GE   EI G  + +  +   VE       +D+VGTGGDG  T NIST  + + A  G  VAK             DVLEALGV IDL+P  V RCV+EAGIGFM + ++HPA++   P
Sbjct:   15 LDIDEAMEAMSAI--MTGEATPAQIAALVTALRMRGERETEIAGFVKGLRAHMIPVELQLAQPVIDVVGTGGDGNRTFNISTATAFVVAGAGVPVAKHGNRAMSSRAGSADVLEALGVRIDLNPSAVARCVEEAGIGFMFAQRFHPALRHAAP 165          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_AZOVD (Anthranilate phosphoribosyltransferase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=trpD PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.552e-23
Identity = 62/149 (41.61%), Postives = 84/149 (56.38%), Query Frame = 2
Query:  242 RVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 682
            R+DL  AE Q  +  ++  +  +A I AF + +R K E+  EIVG A  M + A  V  G+   VD  GTGGDG N  N+ST A+ + AA G +VAK             D+LEA GV ++L PE V RCV+  G+GFM +  +H AMK
Sbjct:   13 RLDLNTAEMQGVMRQIMTGQCSDAQIGAFLMGMRMKSESIDEIVGAALVMRELAAPVTIGVERLVDTCGTGGDGMNIFNVSTAAAFVVAAAGGRVAKHGNRAVSGKSGSADLLEAAGVYLELSPEQVARCVESVGVGFMFAPAHHGAMK 161          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_ALKMQ (Anthranilate phosphoribosyltransferase OS=Alkaliphilus metalliredigens (strain QYMF) GN=trpD PE=3 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.552e-23
Identity = 65/158 (41.14%), Postives = 85/158 (53.80%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKF 685
            + ID +I R DL E E  A +  ++  +  ++ I  F   LR KGET  EI   A+ M   A  VE     ++D  GTGGD ANT NIST  + +AAA G  V K             DVLE LGV IDL P+ V  CV++  +GFM + K+H AMK+
Sbjct:    4 QAIDKVIRRQDLAETEMMAVMQGIMEGKVTDSQIGGFLTALRMKGETVEEITASAKVMRSKALVVEVNQPHSIDTCGTGGDQANTFNISTAVAFVAAAAGVTVVKHGNRSVSSQCGSADVLEKLGVNIDLTPKQVETCVEQVNMGFMFAPKFHQAMKY 161          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_HALLT (Anthranilate phosphoribosyltransferase OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=trpD PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.334e-23
Identity = 62/159 (38.99%), Postives = 86/159 (54.09%), Query Frame = 2
Query:  215 NELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFV 688
            N+ ++ +    DLT  EA+ +   +  EA EA I A    LRAKGET  EI G A+ M   A  +E   +  VD  GTGGD  +T+N+ST A+I+AA  G  +AK             DVLE  G  ++ +P  V   ++  GIGFM++  +HPAMK V
Sbjct:    4 NDTVERVTDGADLTVDEAREAARLVFEEATEAQIGALLAALRAKGETEAEIAGFAQGMRDAARTIEPDREPLVDTCGTGGDDYDTINVSTTAAIVAAGAGVPIAKHGNYSVSSSSGSADVLEVAGADVEAEPPAVEEAIETDGIGFMLAPVFHPAMKAV 162          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_GEOKA (Anthranilate phosphoribosyltransferase OS=Geobacillus kaustophilus GN=trpD PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.334e-23
Identity = 57/145 (39.31%), Postives = 85/145 (58.62%), Query Frame = 2
Query:  251 LTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 682
            LTE EA A+++ +++ EA ++ I++   +LR +GET  E+VG  RAM    T +E   D +D  GTGGDGA T N+ST A+I+ ++ G KVAK             DVLE LG+ I   P   ++ ++  G+ F+ +  YH AMK
Sbjct:   15 LTEDEAYAAMNIIMSGEATDSQIASLLSMLRLRGETVDELVGFVRAMRDRMTAIEASDDVIDTCGTGGDGAATFNVSTAAAIVISSLGVKVAKHGNRAVSSKSGSADVLERLGIDIQTSPSAAKQALETKGLAFLFAPLYHAAMK 159          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_BACST (Anthranilate phosphoribosyltransferase OS=Bacillus stearothermophilus GN=trpD PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.334e-23
Identity = 57/146 (39.04%), Postives = 86/146 (58.90%), Query Frame = 2
Query:  251 LTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKF 685
            LTEAEA  +++ +++ EA ++ I++   +LR +GET  EI G  RAM    T ++   D +D  GTGGDGA T N+ST A+I+ ++ G KVAK             DVLE LG+ I   PE  ++ ++  G+ F+ +  YH AMK+
Sbjct:   15 LTEAEAYEAMNAVMSGEATDSQIASLVSILRVRGETVDEIAGFVRAMRDRMTTIDAGDDVIDTCGTGGDGAATFNVSTAAAIVVSSLGVKVAKHGNRAVSSKSGSADVLERLGIDIPASPEAAKQALETKGLAFLFAPLYHAAMKY 160          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_AZOBR (Anthranilate phosphoribosyltransferase OS=Azospirillum brasilense GN=trpD PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.334e-23
Identity = 63/149 (42.28%), Postives = 85/149 (57.05%), Query Frame = 2
Query:  251 LTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            L EAEA  + D +++  A  + +  F + LR +GET  EI G AR M   A  VE     +D  GTGGDG+ T NIST A+++ AACG  VAK             DVL ALGV +D D   VR+ + +A IGF+M+ ++H AM+ V P
Sbjct:   27 LNEAEASLAFDIIMSGNATPSQMGGFLMALRVRGETVDEITGAARVMRAKAIPVEAPDGTIDTCGTGGDGSGTYNISTAAAVVIAACGVPVAKHGNRAMSSKSGAADVLGALGVNLDCDLGLVRKALWDARIGFLMAPRHHLAMRNVGP 175          
The following BLAST results are available for this feature:
BLAST of FC931331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_XANOP2.552e-2346.32Anthranilate phosphoribosyltransferase OS=Xanthomo... [more]
TRPD_XANOM2.552e-2346.32Anthranilate phosphoribosyltransferase OS=Xanthomo... [more]
TRPD_VIBHB2.552e-2336.97Anthranilate phosphoribosyltransferase OS=Vibrio h... [more]
TRPD_THERP2.552e-2341.83Anthranilate phosphoribosyltransferase OS=Thermomi... [more]
TRPD_AZOVD2.552e-2341.61Anthranilate phosphoribosyltransferase OS=Azotobac... [more]
TRPD_ALKMQ2.552e-2341.14Anthranilate phosphoribosyltransferase OS=Alkaliph... [more]
TRPD_HALLT3.334e-2338.99Anthranilate phosphoribosyltransferase OS=Halorubr... [more]
TRPD_GEOKA3.334e-2339.31Anthranilate phosphoribosyltransferase OS=Geobacil... [more]
TRPD_BACST3.334e-2339.04Anthranilate phosphoribosyltransferase OS=Bacillus... [more]
TRPD_AZOBR3.334e-2342.28Anthranilate phosphoribosyltransferase OS=Azospiri... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34104A02EF PostHarvP1 Citrus clementina cDNA clone C34104A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931331 ID=FC931331; Name=FC931331; organism=Citrus clementina; type=EST; length=705bp
GAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCT
CTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTT
CGAAACTGTGGATTTACGACTGCGGGTAGTAATCCGAGATGCAGAGAATT
AACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGCCCTC
AAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGAT
TTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGC
TGATGAGGCCTTGATTAGTGCTTTTTTTGTTTTGCTCAGAGCCAAAGGAG
AAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCT
ACGAAGGTGGAAGGGCTGGGTGATGCAGTTGATATTGTGGGTACAGGAGG
TGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTG
CAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCT
GCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTT
GGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCA
TGATGTCGACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCANGTGAG
GAAAA
back to top