FC931331

Overview
NameFC931331
Unique NameFC931331
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_RHOBA (Anthranilate phosphoribosyltransferase OS=Rhodopirellula baltica GN=trpD PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.354e-23
Identity = 65/172 (37.79%), Postives = 96/172 (55.81%), Query Frame = 2
Query:  179 VSDNTRPQTPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAV-DIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFV 688
            ++D++   +  F++ I       DL+  +  A +D +L   A+E  +    + LR KGE   E+VG ARAM K+ T+++   D + D  GTGG G+ T NIST  +ILA+ACG  VAK             DVLE LGV I+ +P+ V R +++ GI F  + K HPAM+ V
Sbjct:    1 MTDSSTDPSLSFSDAITHARGGNDLSAEQTGALIDAMLQGAANEEEVGQLLLALREKGEAVSELVGAARAMRKHMTRIDHEHDVLLDTCGTGGSGSGTFNISTAVAILASACGVAVAKHGNRRATSKTGSADVLECLGVKIESEPDQVSRRLNDIGICFCFAAKLHPAMRHV 172          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_BACCA (Anthranilate phosphoribosyltransferase (Fragment) OS=Bacillus caldotenax GN=trpD PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.354e-23
Identity = 57/145 (39.31%), Postives = 85/145 (58.62%), Query Frame = 2
Query:  251 LTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 682
            LTE EA A+++ +++ EA ++ I++   +LR +GET  E+VG  RAM    T +E   D +D  GTGGDGA T N+ST A+I+ ++ G KVAK             DVLE LG+ I   P   ++ ++  G+ F+ +  YH AMK
Sbjct:   15 LTEDEAYAAMNIIMSGEATDSQIASLLSMLRLRGETVDELVGFVRAMRDRMTAIEASDDVIDTCGTGGDGAATFNVSTAAAIVISSLGVKVAKHGNRAVSSKSGSADVLERLGIDIHTSPSAAKQALETKGLAFLFAPLYHAAMK 159          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_PSYIN (Anthranilate phosphoribosyltransferase OS=Psychromonas ingrahamii (strain 37) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.686e-23
Identity = 58/162 (35.80%), Postives = 91/162 (56.17%), Query Frame = 2
Query:  215 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            +E+++ L +   LT  ++QA  + ++  + D  ++S+    L+ KGET  EI G A A++  AT       D  DIVGTGGDG  T+NIST ++ +AAACG KV K             D+L A G+ +D+  +  R+C+D+  I F+ + +YH  M+F  P
Sbjct:    7 HEILEQLYAAKSLTSEQSQAFFERVVQGQVDPIILSSVLTALKIKGETAQEITGAANALLAQATPFPRPDYDFTDIVGTGGDGLGTINISTASAFVAAACGLKVCKHGSRSVSSKSGSSDLLAAFGLNLDMSAQQARQCLDDLNICFLFAPQYHAGMRFAAP 168          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_LEGPL (Anthranilate phosphoribosyltransferase OS=Legionella pneumophila (strain Lens) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.686e-23
Identity = 57/158 (36.08%), Postives = 86/158 (54.43%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVR 691
            L + L+SR DL+  + Q  +   +  E  +  I+ F  L+R KGET  E+   A+ M + A K++     +DIVGTGGDG NT N+ST  S + AA G KVAK             D+LE  G +++L    V+ C+++  + F+ +  YHPAM+  R
Sbjct:    6 LFEQLLSRQDLSSDQMQEVIHACMTGEFSDVQIATFLALMRMKGETVNELTAAAKVMRQLAHKIDLGNPLIDIVGTGGDGRNTFNVSTACSFVVAAAGIKVAKHGNRSVSSRSGSADLLEQAGFILNLSDSQVQNCINQCQLAFLFAPHYHPAMQHAR 163          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_CHLT3 (Anthranilate phosphoribosyltransferase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.686e-23
Identity = 60/127 (47.24%), Postives = 74/127 (58.27%), Query Frame = 2
Query:  314 ISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            I+AF VLLR +GE   EI G ARA++ +A +    GD +D  GTGGDGANT NIST AS++A ACG KVAK             DVLEA+G  IDL  +       E G  F+ +  +H AMK V P
Sbjct:   38 IAAFLVLLRQRGEEVEEIYGAARAILNHAEQPILEGDPIDTCGTGGDGANTFNISTAASLIAHACGVKVAKHGNRSISSRCGSADVLEAMGFKIDLPKKETEELFKETGFVFLFAPIFHKAMKNVAP 164          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_BURP8 (Anthranilate phosphoribosyltransferase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.686e-23
Identity = 61/130 (46.92%), Postives = 77/130 (59.23%), Query Frame = 2
Query:  311 LISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            + +A    LR K ET GEI   A  M ++A  V+   ++  VDIVGTGGDG++T NIST    ++AA GAKVAK             DVLEALGV IDL PE V   + E G+GFM +  +HPAMK + P
Sbjct:   38 MAAAIITGLRVKKETIGEITAAATVMREFARHVDVQDNSNFVDIVGTGGDGSHTFNISTATMFVSAAAGAKVAKHGNRGVSSKSGSADVLEALGVNIDLQPEQVAASITETGMGFMFAPNHHPAMKNIAP 167          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_VIBVU (Anthranilate phosphoribosyltransferase OS=Vibrio vulnificus GN=trpD PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.427e-23
Identity = 61/163 (37.42%), Postives = 89/163 (54.60%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPXEE 703
            +I+ L  +  LTE E+Q   D ++  E D  L+++    L+ KGET  EI G A+A++  A        D  DIVGTGGDG NT+NIST A+ +AAACG KVAK             D+L++ G+ + +  E  R  VD  G+ F+ + +YH  +K   P  +
Sbjct:    4 IINKLYQQASLTEQESQQLFDTIIRGELDPILMASALTALKIKGETPDEIAGAAKALLANAQPFPRPDYDFADIVGTGGDGHNTINISTTAAFVAAACGLKVAKHGNRSVSSKSGSSDLLDSFGINLAMSAEDTRSAVDNIGVAFLFAPQYHSGVKHAMPVRQ 166          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_VIBCH (Anthranilate phosphoribosyltransferase OS=Vibrio cholerae GN=trpD PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 7.427e-23
Identity = 59/163 (36.20%), Postives = 92/163 (56.44%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPXEE 703
            +I+ L  +  LT+AE+Q   D ++  E D  L++A    L+ KGET  EI G A+A++  A        D  DIVGTGGDG+NT+NIST A+ +AAACG KVAK             D+L + G+ + +  +  R+ +D+ G+ F+ + +YH  ++   P  +
Sbjct:    4 IINKLYEQQGLTQAESQQLFDQIIRGEMDPVLMAAVLTALKIKGETPDEIAGAAKALLANANPFPRPDYDFADIVGTGGDGSNTINISTTAAFVAAACGVKVAKHGNRGVSSKSGSSDLLSSFGINLAMSAQDSRQALDDLGVAFLFAPQYHGGVRHAMPVRQ 166          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_VIBC3 (Anthranilate phosphoribosyltransferase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.427e-23
Identity = 59/163 (36.20%), Postives = 92/163 (56.44%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPXEE 703
            +I+ L  +  LT+AE+Q   D ++  E D  L++A    L+ KGET  EI G A+A++  A        D  DIVGTGGDG+NT+NIST A+ +AAACG KVAK             D+L + G+ + +  +  R+ +D+ G+ F+ + +YH  ++   P  +
Sbjct:    4 IINKLYEQQGLTQAESQQLFDQIIRGEMDPVLMAAVLTALKIKGETPDEIAGAAKALLANANPFPRPDYDFADIVGTGGDGSNTINISTTAAFVAAACGVKVAKHGNRGVSSKSGSSDLLSSFGINLAMSAQDSRQALDDLGVAFLFAPQYHGGVRHAMPVRQ 166          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_MYCSJ (Anthranilate phosphoribosyltransferase OS=Mycobacterium sp. (strain JLS) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.427e-23
Identity = 66/164 (40.24%), Postives = 94/164 (57.32%), Query Frame = 2
Query:  203 TPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKV--EGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 682
            TP +  ++  L +  +L   +A  ++D ++   A  A I+ F V ++ K  T  E+  LA  M+K+A ++  + +G + VDIVGTGGDGANTVN+ST A+I+ AA G  V K             D LEALGV IDL PE V   V E GIGF  + ++HP+ K
Sbjct:   11 TPTWPSILGRLTTGQNLGTGQAAWAMDQIMTGTATPAQIAGFAVAMKLKRPTSAEVTELADVMLKHARRIPTDVIGNETVDIVGTGGDGANTVNLSTMAAIVVAAAGVPVMKHGNRAASSLSGGADTLEALGVRIDLGPEQVAASVAEVGIGFAFANQFHPSYK 174          
The following BLAST results are available for this feature:
BLAST of FC931331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_RHOBA4.354e-2337.79Anthranilate phosphoribosyltransferase OS=Rhodopir... [more]
TRPD_BACCA4.354e-2339.31Anthranilate phosphoribosyltransferase (Fragment) ... [more]
TRPD_PSYIN5.686e-2335.80Anthranilate phosphoribosyltransferase OS=Psychrom... [more]
TRPD_LEGPL5.686e-2336.08Anthranilate phosphoribosyltransferase OS=Legionel... [more]
TRPD_CHLT35.686e-2347.24Anthranilate phosphoribosyltransferase OS=Chlorohe... [more]
TRPD_BURP85.686e-2346.92Anthranilate phosphoribosyltransferase OS=Burkhold... [more]
TRPD_VIBVU7.427e-2337.42Anthranilate phosphoribosyltransferase OS=Vibrio v... [more]
TRPD_VIBCH7.427e-2336.20Anthranilate phosphoribosyltransferase OS=Vibrio c... [more]
TRPD_VIBC37.427e-2336.20Anthranilate phosphoribosyltransferase OS=Vibrio c... [more]
TRPD_MYCSJ7.427e-2340.24Anthranilate phosphoribosyltransferase OS=Mycobact... [more]

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Properties
Property NameValue
Genbank descriptionC34104A02EF PostHarvP1 Citrus clementina cDNA clone C34104A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931331 ID=FC931331; Name=FC931331; organism=Citrus clementina; type=EST; length=705bp
GAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCT
CTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTT
CGAAACTGTGGATTTACGACTGCGGGTAGTAATCCGAGATGCAGAGAATT
AACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGCCCTC
AAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGAT
TTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGC
TGATGAGGCCTTGATTAGTGCTTTTTTTGTTTTGCTCAGAGCCAAAGGAG
AAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCT
ACGAAGGTGGAAGGGCTGGGTGATGCAGTTGATATTGTGGGTACAGGAGG
TGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTG
CAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCT
GCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTT
GGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCA
TGATGTCGACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCANGTGAG
GAAAA
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