FC931331

Overview
NameFC931331
Unique NameFC931331
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_METEP (Anthranilate phosphoribosyltransferase OS=Methylobacterium extorquens (strain PA1) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.699e-23
Identity = 66/162 (40.74%), Postives = 86/162 (53.09%), Query Frame = 2
Query:  212 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            F   +  + S   L+  +A+A+ D LL+ E       AF   L  +GE+  EIVG   AM      V     A+DIVGTGGD + + N+ST A+IL AACG  VAK             DVL ALGV I L PE + RC+ EAG+ FM +  +H AM+ V P
Sbjct:    4 FKTHLAIVASGAPLSREQARAAFDDLLSGEVTPIQAGAFLTALSVRGESEDEIVGAVSAMRARMLPVAAPEGAIDIVGTGGDHSGSYNVSTLAAILTAACGVPVAKHGNRAATSRSGAADVLAALGVKIGLPPEALARCLSEAGLCFMFAQTHHGAMRHVAP 165          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_METC4 (Anthranilate phosphoribosyltransferase OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.699e-23
Identity = 66/162 (40.74%), Postives = 86/162 (53.09%), Query Frame = 2
Query:  212 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            F   +  + S   L+  +A+A+ D LL+ E       AF   L  +GE+  EIVG   AM      V     A+DIVGTGGD + + N+ST A+IL AACG  VAK             DVL ALGV I L PE + RC+ EAG+ FM +  +H AM+ V P
Sbjct:    4 FKTHLAIVASGAPLSREQARAAFDDLLSGEVTPIQAGAFLTALSVRGESEDEIVGAVSAMRARMLPVAAPEGAIDIVGTGGDHSGSYNVSTLAAILTAACGVPVAKHGNRAATSRSGAADVLAALGVKIGLPPEALARCLSEAGLCFMFAQTHHGAMRHVAP 165          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_CLOPH (Anthranilate phosphoribosyltransferase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.699e-23
Identity = 65/160 (40.62%), Postives = 88/160 (55.00%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            E I  L+++ DL+   A+  +D +++ EA   LI ++   LR KGET  EI   A  M K+  ++    D ++IVGTGGD ANT NIST    + +A G  VAK             DVLEALGV I L P    + ++E G+ FM +  YH AMKFV P
Sbjct:    4 EAIYQLVNKEDLSYEVAEQVMDEIMSGEASNVLIGSYLTALRMKGETIDEITASAAGMRKHCVRLLHNMDVLEIVGTGGDEANTFNISTTTGFVVSAAGIPVAKHGNRCVSSKCGAADVLEALGVNIMLAPLESAKILEEMGLCFMFAQTYHSAMKFVAP 163          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_AZOC5 (Anthranilate phosphoribosyltransferase OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.699e-23
Identity = 64/162 (39.51%), Postives = 85/162 (52.47%), Query Frame = 2
Query:  212 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            F  L++ +     L   EA  + D +++ E   + + A  + LR +GET  EIVG    M      V+    +VD+VGTGGD + + NIST AS + A  G  VAK             DVL ALGV IDL P  + RC+ E GIGFM +  +HPAMK V P
Sbjct:    4 FRPLLNKVAMGTALNRDEAAYAFDKMMSGETTPSQMGALLMGLRVRGETVDEIVGAVSVMRAKMLTVDAPVGSVDVVGTGGDASGSYNISTCASFIVAGAGVPVAKHGNRALSSKSGAADVLAALGVRIDLAPAAISRCIAETGIGFMFAPTHHPAMKNVGP 165          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_ANASK (Anthranilate phosphoribosyltransferase OS=Anaeromyxobacter sp. (strain K) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.699e-23
Identity = 65/149 (43.62%), Postives = 82/149 (55.03%), Query Frame = 2
Query:  248 DLTEAEAQASLDYLLNE-ADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFV 688
            DLT AEA + +  + +  A  A   AF   LR KGET  EI G A  M + A +V    D  +D  GTGGDG +T NIST A+ +AA  G  VAK             DVL ALGV +D D E V RC++E GIGF+ + + HPA K +
Sbjct:   14 DLTRAEAASVMTEIADGGATPAQSGAFLAALRMKGETVDEIAGAADVMRQRADRVRVDRDVFIDTCGTGGDGRHTFNISTTAAFVAAGAGVCVAKHGNRAVSSRSGSADVLAALGVNVDADKETVERCIEEVGIGFLFAVRLHPAFKAI 162          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_ANAD2 (Anthranilate phosphoribosyltransferase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.699e-23
Identity = 66/154 (42.86%), Postives = 83/154 (53.90%), Query Frame = 2
Query:  233 LISRVDLTEAEAQASLDYLLNE-ADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFV 688
            L+   DLT AEA   +  + +  A  A   AF   LR KGET  EI G A  M + A +V    D  +D  GTGGDG +T NIST A+ +AA  G  VAK             DVL ALGV +D D E V RC++E GIGF+ + + HPA K +
Sbjct:    9 LLEGEDLTRAEAALVMTEIADGGATPAQSGAFLAALRMKGETVDEIAGAADVMRQRADRVRVDRDVFIDTCGTGGDGRHTFNISTTAAFVAAGAGVCVAKHGNRAVSSRSGSADVLAALGVNVDADKETVERCIEEVGIGFLFAVRLHPAFKAI 162          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_ALCBS (Anthranilate phosphoribosyltransferase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.699e-23
Identity = 64/161 (39.75%), Postives = 88/161 (54.66%), Query Frame = 2
Query:  233 LISRVDLTEAEAQASLDYLLNE-ADEALISAFFVLLRAKGETFGEIVGLARAMIKYAT--KVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKF-VRPXEE 703
            ++  +DL+  E +  +  ++   A +A I A  V LR K E+  EI G    M +  T   VE     VDIVGTGGDGAN  N+ST +S +AAA GA VAK             D+LE  G+ +DL P  + +CVD  G+GFM +  +H AMK+ V P +E
Sbjct:   10 VVDNIDLSIEEMRDVMGQVMTGGATDAQIGALMVGLRMKSESLDEITGAVMVMRELVTGVTVENRQYLVDIVGTGGDGANLFNVSTASSFVAAAAGAHVAKHGGRSVSSQSGSADLLETAGIALDLSPAQIGQCVDNVGVGFMFAPNHHKAMKYAVGPRKE 170          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_VIBPA (Anthranilate phosphoribosyltransferase OS=Vibrio parahaemolyticus GN=trpD PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.267e-22
Identity = 59/163 (36.20%), Postives = 91/163 (55.83%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPXEE 703
            +I+ L  +  LT+ E+Q   D ++  E D  L+++    L+ KGET  EI G A+A++  A        D  DIVGTGGDG NT+NIST A+ +AAACG KVAK             D+L++ G+ + +  E  R+ VD+ G+ F+ + +YH  ++   P  +
Sbjct:    4 IINKLYEQQSLTQEESQQLFDIIIRGELDPILMASALTALKIKGETPDEIAGAAKALLANANPFPRPDYDFADIVGTGGDGHNTINISTTAAFVAAACGLKVAKHGNRSVSSKSGSSDLLDSFGINLAMSAEDTRKAVDDIGVAFLFAPQYHGGVRHAMPVRQ 166          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_METPB (Anthranilate phosphoribosyltransferase OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=trpD PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.267e-22
Identity = 66/162 (40.74%), Postives = 86/162 (53.09%), Query Frame = 2
Query:  212 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            F   +  + S   L+  +A+A+ D LL+ E       AF   L  +GE+  EIVG   AM      V     A+DIVGTGGD + + N+ST A+IL AACG  VAK             DVL ALGV I L PE + RC+ EAG+ FM +  +H AM+ V P
Sbjct:    4 FKTHLATVASGAALSREQARAAFDDLLSGEVTPIQAGAFLTALSVRGESEDEIVGAVSAMRARMLPVTAPTGAIDIVGTGGDHSGSYNVSTLAAILTAACGVSVAKHGNRAATSRSGAADVLVALGVKIGLPPEALARCLSEAGLCFMFAQTHHGAMRHVAP 165          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_METM7 (Anthranilate phosphoribosyltransferase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=trpD PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.267e-22
Identity = 62/158 (39.24%), Postives = 91/158 (57.59%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLNEADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            +++ LI R +L+  E+    + LLNE+ E  I+A+ V L+ KG T  EI G A+AM   A K++ LG+  D  GTGGDG+ T+N+ST  SI+ + C  KVAK             +V EALG  I   PE  ++ +D+    F+ + KYHPA+K + P
Sbjct:    1 MLNKLIERENLSFEESYELFNMLLNES-EMRIAAYLVALQTKGVTADEIAGFAKAMRDNAVKID-LGEVTDTCGTGGDGSKTINVSTAVSIILS-CFTKVAKHGNVSITSKSGSANVYEALGCKIPETPEDAKKSMDKTNFAFLFAPKYHPALKKIMP 155          
The following BLAST results are available for this feature:
BLAST of FC931331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_METEP9.699e-2340.74Anthranilate phosphoribosyltransferase OS=Methylob... [more]
TRPD_METC49.699e-2340.74Anthranilate phosphoribosyltransferase OS=Methylob... [more]
TRPD_CLOPH9.699e-2340.63Anthranilate phosphoribosyltransferase OS=Clostrid... [more]
TRPD_AZOC59.699e-2339.51Anthranilate phosphoribosyltransferase OS=Azorhizo... [more]
TRPD_ANASK9.699e-2343.62Anthranilate phosphoribosyltransferase OS=Anaeromy... [more]
TRPD_ANAD29.699e-2342.86Anthranilate phosphoribosyltransferase OS=Anaeromy... [more]
TRPD_ALCBS9.699e-2339.75Anthranilate phosphoribosyltransferase OS=Alcanivo... [more]
TRPD_VIBPA1.267e-2236.20Anthranilate phosphoribosyltransferase OS=Vibrio p... [more]
TRPD_METPB1.267e-2240.74Anthranilate phosphoribosyltransferase OS=Methylob... [more]
TRPD_METM71.267e-2239.24Anthranilate phosphoribosyltransferase OS=Methanoc... [more]

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Properties
Property NameValue
Genbank descriptionC34104A02EF PostHarvP1 Citrus clementina cDNA clone C34104A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931331 ID=FC931331; Name=FC931331; organism=Citrus clementina; type=EST; length=705bp
GAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCT
CTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTT
CGAAACTGTGGATTTACGACTGCGGGTAGTAATCCGAGATGCAGAGAATT
AACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGCCCTC
AAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGAT
TTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGC
TGATGAGGCCTTGATTAGTGCTTTTTTTGTTTTGCTCAGAGCCAAAGGAG
AAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCT
ACGAAGGTGGAAGGGCTGGGTGATGCAGTTGATATTGTGGGTACAGGAGG
TGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTG
CAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCT
GCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTT
GGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCA
TGATGTCGACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCANGTGAG
GAAAA
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