FC931331

Overview
NameFC931331
Unique NameFC931331
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_SOLUE (Anthranilate phosphoribosyltransferase OS=Solibacter usitatus (strain Ellin6076) GN=trpD PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.654e-22
Identity = 65/159 (40.88%), Postives = 86/159 (54.09%), Query Frame = 2
Query:  233 LISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKV----EGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            L+    L+ A+A+A++  +L  EA  A I+AF + L+ KGET  E+VG ARAM   A  V    EG    +D  GTGGDGA T NIST A+ + AA G  VAK             D+LEA G+ + + PE     + E GIGF+ +   H AMK   P
Sbjct:   10 LVEEQHLSAADAEAAMQIVLRGEASHAQIAAFLIALKMKGETVDELVGFARAMRAMAVPVSPNLEG-ATLLDTCGTGGDGAGTFNISTVAAFVVAAAGVHVAKHGNRSITSKCGSADLLEAWGIPVAMPPEATAFAIREVGIGFLFAPAVHTAMKHAHP 167          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_METMP (Anthranilate phosphoribosyltransferase OS=Methanococcus maripaludis GN=trpD PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.654e-22
Identity = 62/158 (39.24%), Postives = 91/158 (57.59%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLNEADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            +++ LI R +L+  E+    + LLNE+ E  I+A+ V L+ KG T  EI G A+AM   A K++ LGD  D  GTGGDG+ T+N+ST  SI+ A C  KVAK             +V +ALG  I   P+  ++ +D+    F+ + KYHPA+K + P
Sbjct:    1 MLNKLIERENLSFEESYELFNVLLNES-EMRIAAYLVALQTKGLTADEIAGFAKAMRDNAVKID-LGDVTDTCGTGGDGSKTINVSTAVSIILA-CFTKVAKHGNVSITSNSGSANVYKALGCKIPETPDDAKKSMDKTNFAFLFAQKYHPALKKIMP 155          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_BURCM (Anthranilate phosphoribosyltransferase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=trpD PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.654e-22
Identity = 60/126 (47.62%), Postives = 76/126 (60.32%), Query Frame = 2
Query:  311 LISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 682
            + +A    LR K ET GEI   A  M ++A  VE   ++  VDIVGTGGDG++T NIST +  +AAA GAKVAK             DVL+ALGV IDL P+ V   + E G+GFM +  +HPAMK
Sbjct:   39 MAAAIITGLRVKKETIGEIAAAATVMREFANHVEVQDNSNFVDIVGTGGDGSHTFNISTASMFIAAAAGAKVAKHGNRGVSSKSGSADVLDALGVNIDLQPDQVAASIAETGMGFMFAPNHHPAMK 164          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_BURA4 (Anthranilate phosphoribosyltransferase OS=Burkholderia ambifaria (strain MC40-6) GN=trpD PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.654e-22
Identity = 60/126 (47.62%), Postives = 76/126 (60.32%), Query Frame = 2
Query:  311 LISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 682
            + +A    LR K ET GEI   A  M ++A  VE   ++  VDIVGTGGDG++T NIST +  +AAA GAKVAK             DVL+ALGV IDL P+ V   + E G+GFM +  +HPAMK
Sbjct:   39 MAAAIITGLRVKKETIGEIAAAATVMREFANHVEVQDNSNFVDIVGTGGDGSHTFNISTASMFIAAAAGAKVAKHGNRGVSSKSGSADVLDALGVNIDLQPDQVAASIAETGMGFMFAPNHHPAMK 164          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_VIBVY (Anthranilate phosphoribosyltransferase OS=Vibrio vulnificus (strain YJ016) GN=trpD PE=3 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.161e-22
Identity = 61/163 (37.42%), Postives = 89/163 (54.60%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPXEE 703
            +I+ L  +  LTE E+Q   D ++  E D  L+++    L+ KGET  EI G A+A++  A        D  DIVGTGGDG NT+NIST A+ +AAACG KVAK             D+L++ G+ + +  E  R  VD  G+ F+ + +YH  +K   P  +
Sbjct:    4 IINKLYLQESLTEQESQQLFDTIIRGELDPILMASALTALKIKGETPDEIAGAAKALLANAQPFPRPDYDFADIVGTGGDGHNTINISTTAAFVAAACGLKVAKHGNRSVSSKSGSSDLLDSFGINLAMSAEDTRSAVDSIGVAFLFAPQYHSGVKHAMPVRQ 166          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_PELUB (Anthranilate phosphoribosyltransferase OS=Pelagibacter ubique GN=trpD PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.161e-22
Identity = 61/158 (38.61%), Postives = 92/158 (58.23%), Query Frame = 2
Query:  224 IDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            ID L  + DL+ AE++ + + L+N +A +  I  F  LL +KGE+  EI G    +++  +K   + D +D  GTGGDG NT+NIST +++L ++ G KVAK             DVLEAL + IDL+P+ +   + +   GFM +  YH AM+FV P
Sbjct:    5 IDKLKDKQDLSFAESKNAFEILMNGKASDDEIFDFLTLLSSKGESSDEIAG-GVFVLRDKSKRVNVDDCIDTCGTGGDGMNTLNISTASALLLSSMGIKVAKHGNKAVSSKCGSGDVLEALNIKIDLEPKDIEEQIKKNNFGFMFAPNYHSAMRFVGP 161          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_DELAS (Anthranilate phosphoribosyltransferase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.161e-22
Identity = 61/135 (45.19%), Postives = 75/135 (55.56%), Query Frame = 2
Query:  296 EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKV--EGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            E    + +A    LR K ET GEI   A  M +++ KV  E     VDIVGTGGDGANT NIST +  + AA G KV+K             D +EALGV I L PE + R + + GIGFM +  +HPAMK V P
Sbjct:   35 ELSPVMTAAIVTGLRVKKETIGEITAAAEVMREFSNKVHVEDKRHLVDIVGTGGDGANTFNISTCSIFVIAAAGGKVSKHGGRSVSSKSGSADAMEALGVNIQLTPEQIARSIADVGIGFMFAPNHHPAMKNVAP 169          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_XYLFA (Anthranilate phosphoribosyltransferase OS=Xylella fastidiosa GN=trpD PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.822e-22
Identity = 64/160 (40.00%), Postives = 87/160 (54.37%), Query Frame = 2
Query:  224 IDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKV--EGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            + C+I   ++ + E    +  ++N E    +++A    LR K ET GEI G A  M +++ KV  +     VDIVGTGGDG +T NIST A  +AAA GAKVAK             DVLEALG  I+L P  V   +   G+GFM +  +HP M+ V P
Sbjct:    9 LQCIIEHREILQDEMVQLMRQIMNAEVSGIMVAAILAGLRVKKETVGEIAGAATVMREFSRKVNVQDRTHLVDIVGTGGDGWHTFNISTCAMFVAAAAGAKVAKHGNRSVSSKSGSADVLEALGASIELQPLEVAEVIGCIGVGFMFAPIHHPVMQVVSP 168          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_PSYWF (Anthranilate phosphoribosyltransferase OS=Psychrobacter sp. (strain PRwf-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.822e-22
Identity = 56/157 (35.67%), Postives = 88/157 (56.05%), Query Frame = 2
Query:  233 LISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLG--DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            ++ R+DLT+ E +  +  +++    +A++ A    L  K E+  EI   A  M+ +A K+E     + VDIVGTGGDG+N  N+ST ++ +AAA GA VAK             D+LE  G+ +++ PE  R C++  GIGF+ +  +H AMK   P
Sbjct:   27 ILRRIDLTQQEMRQIMTIIMDGRCPDAMLGALLTGLNMKSESIDEITASASVMLDFAKKIEPKNRTNMVDIVGTGGDGSNLFNVSTASAFVAAAAGATVAKHGNRGVSSKSGSSDLLEQAGLNLNITPEQTRECIETQGIGFLFAPNHHTAMKHAIP 183          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_PSEA6 (Anthranilate phosphoribosyltransferase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=trpD PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.822e-22
Identity = 55/134 (41.04%), Postives = 78/134 (58.21%), Query Frame = 2
Query:  296 EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            + D  ++S+    L+ KGET  EI G A AMI+ A+ V+    D  DIVGTGGDG NT+NIS+ A+I+AA+CG KVAK             D+  A G+ +D+ P   R C+D+A + F+ +  YH  +K   P
Sbjct:   31 QVDNIILSSLLTALKIKGETPEEIAGAATAMIQNASPVKRPEYDFADIVGTGGDGHNTINISSAAAIVAASCGVKVAKHGNRSVSSKSGSADLFNAFGMKLDMSPAAARECLDKANLCFLFAPVYHAGIKHAMP 164          
The following BLAST results are available for this feature:
BLAST of FC931331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_SOLUE1.654e-2240.88Anthranilate phosphoribosyltransferase OS=Solibact... [more]
TRPD_METMP1.654e-2239.24Anthranilate phosphoribosyltransferase OS=Methanoc... [more]
TRPD_BURCM1.654e-2247.62Anthranilate phosphoribosyltransferase OS=Burkhold... [more]
TRPD_BURA41.654e-2247.62Anthranilate phosphoribosyltransferase OS=Burkhold... [more]
TRPD_VIBVY2.161e-2237.42Anthranilate phosphoribosyltransferase OS=Vibrio v... [more]
TRPD_PELUB2.161e-2238.61Anthranilate phosphoribosyltransferase OS=Pelagiba... [more]
TRPD_DELAS2.161e-2245.19Anthranilate phosphoribosyltransferase OS=Delftia ... [more]
TRPD_XYLFA2.822e-2240.00Anthranilate phosphoribosyltransferase OS=Xylella ... [more]
TRPD_PSYWF2.822e-2235.67Anthranilate phosphoribosyltransferase OS=Psychrob... [more]
TRPD_PSEA62.822e-2241.04Anthranilate phosphoribosyltransferase OS=Pseudoal... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34104A02EF PostHarvP1 Citrus clementina cDNA clone C34104A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931331 ID=FC931331; Name=FC931331; organism=Citrus clementina; type=EST; length=705bp
GAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCT
CTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTT
CGAAACTGTGGATTTACGACTGCGGGTAGTAATCCGAGATGCAGAGAATT
AACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGCCCTC
AAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGAT
TTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGC
TGATGAGGCCTTGATTAGTGCTTTTTTTGTTTTGCTCAGAGCCAAAGGAG
AAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCT
ACGAAGGTGGAAGGGCTGGGTGATGCAGTTGATATTGTGGGTACAGGAGG
TGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTG
CAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCT
GCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTT
GGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCA
TGATGTCGACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCANGTGAG
GAAAA
back to top