FC931331

Overview
NameFC931331
Unique NameFC931331
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_CHLCH (Anthranilate phosphoribosyltransferase OS=Chlorobium chlorochromatii (strain CaD3) GN=trpD PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.110e-18
Identity = 54/158 (34.18%), Postives = 85/158 (53.80%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFV 688
            +L+  L++    ++ E Q  ++ +++ E  +++I+A   LL+ KG    E+ G   +++ +AT V     AVD  GTGGD   T NIST AS++A + G +VAK             DVLEALG  ++L PE       + G  F+ +  YHP+MK V
Sbjct:    5 QLLQKLLAGEHCSKEEMQDCMNSIMDGEFSDSVIAALLALLQKKGVVANELAGAHASLMAHATTVALSTHAVDTCGTGGDHGGTYNISTTASLIACSAGVRVAKHGNRSVTSSCGSADVLEALGFTLELPPEATISLFKKTGFAFLFAPLYHPSMKRV 162          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPG_SALTY (Anthranilate synthase component II OS=Salmonella typhimurium GN=trpD PE=1 SV=4)

HSP 1 Score: 93.2041 bits (230), Expect = 1.449e-18
Identity = 67/213 (31.46%), Postives = 104/213 (48.83%), Query Frame = 2
Query:  101 RNCGF--------TTAGSNPRCRELTAIQTPQPAVSDNTRPQTPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYAT---KVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPXEE 703
            R CGF        TT G+  R  E T     Q     NT         +++ L     LT+ E+      ++  E     ++A  V ++ +GE   EI G A A+++ A    + E L    DIVGTGGDG+N++NIST ++ +AAACG KVAK             D+L A G+ +D++ +  R+ +DE G+ F+ + KYH  ++   P  +
Sbjct:  163 RVCGFQFHPESILTTQGA--RLLEQTLAWAQQKLEPTNT------LQPILEKLYQAQTLTQQESHQLFSAVVRGELKPEQLAAALVSMKIRGEHPNEIAGAATALLENAAPFPRPEYL--FADIVGTGGDGSNSINISTASAFVAAACGLKVAKHGNRSVSSKSGSSDLLAAFGINLDMNADKSRQALDELGVCFLFAPKYHTGLRHAMPVRQ 365          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_SYNP6 (Anthranilate phosphoribosyltransferase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=trpD PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.449e-18
Identity = 61/170 (35.88%), Postives = 86/170 (50.59%), Query Frame = 2
Query:  206 PCFNE---LIDCLISRVDLTEAEAQASLD-YLLNEADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLG---DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            P F E   L+  L++   L   +A+A ++ +      EAL  A    L++KG +  E+  +A+ + + A  VE        VD  GTGGDGA T NIST  + + AA G KVAK             DVLEALG+ +    + +   VDE GI F+ +  +HPAMK V P
Sbjct:    6 PAFAEAQVLLQRLLNHESLGAVQARALMEQWSSGTLPEALSGALLAALQSKGVSAQELAAMAQVLQEQAVAVEASDRREPLVDTCGTGGDGAETFNISTAVAFVTAAAGVKVAKHGNRSASGRVGSADVLEALGLNLTAPSDRIHAAVDEVGITFLFAPGWHPAMKAVAP 175          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_SHELP (Anthranilate phosphoribosyltransferase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=trpD PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.449e-18
Identity = 55/171 (32.16%), Postives = 89/171 (52.05%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYA---------TKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPXEE 703
            + D L     ++  E +A    ++  + D   ++   V ++ +GET  EI G A A+++ A         T+ +G+   VDIVGTGGDG NT+NIST ++ +AAA GAKVAK             D+L   G+ + + PE  R C+D+ G+ F+ +  YH  ++   P  +
Sbjct:    7 IFDRLYQGQTISREETKALFSEIVEGKMDPVAMAGMLVAMKMRGETIDEISGAADALLQAAKAFPAPSEATRTQGI---VDIVGTGGDGHNTINISTTSAFVAAAAGAKVAKHGNRSVSSKSGSSDLLAQFGIDLTMAPETARDCLDDLGLCFLFAPHYHGGVRHAVPVRQ 174          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_CLOCE (Anthranilate phosphoribosyltransferase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=trpD PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.449e-18
Identity = 58/160 (36.25%), Postives = 81/160 (50.62%), Query Frame = 2
Query:  218 ELIDCLISRVDLT-EAEAQASLDYLLNEADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            E I  +I++ DL  +   Q   + +   A  A I +F   +R KGET  EI   A  M +   ++    D +DIVGTGGD ANT NIST +S + +A G  VAK             D+LEALG+ I L  E     + + G+ FM +  YH +MK+  P
Sbjct:    4 EAIYQVINKQDLDLDKTIQVMEEIMEGRATNAQIGSFLTAMRMKGETIDEITACATVMRQKCKRIHPEKDVLDIVGTGGDEANTFNISTVSSFVVSAGGVPVAKHGGRSVSSKCGSADLLEALGINIALSAEQSAEILQKIGMCFMFAPTYHASMKYAAP 163          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD1_ANASP (Anthranilate phosphoribosyltransferase 1 OS=Anabaena sp. (strain PCC 7120) GN=trpD1 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.449e-18
Identity = 61/181 (33.70%), Postives = 94/181 (51.93%), Query Frame = 2
Query:  161 QTPQPAVSDNTRPQTPCFNELIDCLISRVDLTEAEAQASLD-YLLNEADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGD----AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFV 688
            QTP   +S    P +  ++ ++  L+ R  LT A+A   +  +L +     L  A    ++AKG +  E+VG+AR +   ++            +D  GTGGDGA+T NIST  + +AAA G KVAK             DVLEALG+ ++ + + V+  V E GI F+ +  +HPA+K V
Sbjct:    6 QTPLDNIS--VTPDSNDWSAILQQLLKRQSLTVAQATDLMQGWLTDTIPPVLSGAILAAIQAKGVSSEELVGMARVLQSQSSYSPPHSPFPTPLIDTCGTGGDGASTFNISTAVAFVAAAAGVKVAKHGNRSASSKTGSADVLEALGINLNANADKVQAAVSEVGITFLFAPGWHPALKTV 184          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_SHEDO (Anthranilate phosphoribosyltransferase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=trpD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.893e-18
Identity = 54/167 (32.34%), Postives = 84/167 (50.30%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLL-NEADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAV-----DIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPXEE 703
            L+D L     LT ++++     ++  + D   ++   V L+ +GET  EI G A A+   A       D++     DIVGTGGDG NT+NIST A+ +AAA GAKVAK             D+L   G+ + + P+    C+D  G+ F+ +  YH  ++   P  +
Sbjct:   22 LLDTLYQGHALTRSQSETLFASIVAGDMDPVAMAGMLVALKMRGETTAEITGAADALRSAAKPFPRSADSISTGVLDIVGTGGDGFNTINISTTAAFVAAAAGAKVAKHGNRGVSSKSGSSDLLTHCGIGLTMSPKAASACLDTLGLSFLFAPHYHEGVRHAVPVRQ 188          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_SERP5 (Anthranilate phosphoribosyltransferase OS=Serratia proteamaculans (strain 568) GN=trpD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.893e-18
Identity = 52/163 (31.90%), Postives = 87/163 (53.37%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPXEE 703
            +++ L     + + E+Q     ++  E + + ++A  + ++ +GE   EI G A+A++  A           DIVGTGGDG N++NIST ++ +AAACGAKVAK             D+L A G+ +DL  E  R+ +DE G+ F+ + +YH   +   P  +
Sbjct:    4 ILEKLYRSESMNQQESQQLFSAIVRGELEPSQLAAALISMKIRGEHPEEIAGAAKALLADALPFPRPDYPFADIVGTGGDGTNSINISTASAFVAAACGAKVAKHGNRSVSSRSGSSDLLAAFGIRLDLPAEEARKALDELGVCFLFAPQYHTGFRHAMPVRQ 166          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_HAEIN (Anthranilate phosphoribosyltransferase OS=Haemophilus influenzae GN=trpD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.893e-18
Identity = 56/162 (34.57%), Postives = 88/162 (54.32%), Query Frame = 2
Query:  215 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            N+L++ L S   L+ +E+ A  + ++  E     I+A  + L+ +G    EI G   A ++ A           DIVGTGG+G NT+NIST ++I+AA+ GAK+AK             DVL AL V +++ PE  R+ +DE G+ F+ + +YH   + V P
Sbjct:    4 NQLLEQLYSGHSLSTSESTALFNAVIQGELSNEQIAAMLIALKVRGANTEEISGAVAASLQNAKAFPYPNYPFADIVGTGGNGQNTINISTTSAIVAASMGAKIAKHGNRSVSSKSGASDVLTALSVNVNVTPEQARQALDEIGVCFLFAQQYHSGFRHVAP 165          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_GEOTN (Anthranilate phosphoribosyltransferase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=trpD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.893e-18
Identity = 52/145 (35.86%), Postives = 79/145 (54.48%), Query Frame = 2
Query:  251 LTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 682
            LTE EA  ++  +++  A ++ I++   +L  +GET  E+ G  RAM      ++   D +D  GTGGDGA T NIST A+I+ ++ G KVAK             DVLE LG+ I   P+  +  ++  G+ F+ +  YH AMK
Sbjct:   15 LTEEEAYEAMATVMDGAATDSQIASLLSMLCLRGETVDELTGFVRAMRDRMMAIDAGDDVIDTCGTGGDGAATFNISTAAAIVISSLGVKVAKHGNRAVSSKSGSADVLERLGINIQSSPDAAKEALETNGLTFLYAPLYHTAMK 159          
The following BLAST results are available for this feature:
BLAST of FC931331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_CHLCH1.110e-1834.18Anthranilate phosphoribosyltransferase OS=Chlorobi... [more]
TRPG_SALTY1.449e-1831.46Anthranilate synthase component II OS=Salmonella t... [more]
TRPD_SYNP61.449e-1835.88Anthranilate phosphoribosyltransferase OS=Synechoc... [more]
TRPD_SHELP1.449e-1832.16Anthranilate phosphoribosyltransferase OS=Shewanel... [more]
TRPD_CLOCE1.449e-1836.25Anthranilate phosphoribosyltransferase OS=Clostrid... [more]
TRPD1_ANASP1.449e-1833.70Anthranilate phosphoribosyltransferase 1 OS=Anabae... [more]
TRPD_SHEDO1.893e-1832.34Anthranilate phosphoribosyltransferase OS=Shewanel... [more]
TRPD_SERP51.893e-1831.90Anthranilate phosphoribosyltransferase OS=Serratia... [more]
TRPD_HAEIN1.893e-1834.57Anthranilate phosphoribosyltransferase OS=Haemophi... [more]
TRPD_GEOTN1.893e-1835.86Anthranilate phosphoribosyltransferase OS=Geobacil... [more]

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Properties
Property NameValue
Genbank descriptionC34104A02EF PostHarvP1 Citrus clementina cDNA clone C34104A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931331 ID=FC931331; Name=FC931331; organism=Citrus clementina; type=EST; length=705bp
GAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCT
CTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTT
CGAAACTGTGGATTTACGACTGCGGGTAGTAATCCGAGATGCAGAGAATT
AACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGCCCTC
AAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGAT
TTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGC
TGATGAGGCCTTGATTAGTGCTTTTTTTGTTTTGCTCAGAGCCAAAGGAG
AAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCT
ACGAAGGTGGAAGGGCTGGGTGATGCAGTTGATATTGTGGGTACAGGAGG
TGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTG
CAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCT
GCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTT
GGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCA
TGATGTCGACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCANGTGAG
GAAAA
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