FC931331

Overview
NameFC931331
Unique NameFC931331
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9351 contig Ccv1_Contig9351:3..707. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_FRAP2 (Anthranilate phosphoribosyltransferase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=trpD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.893e-18
Identity = 52/160 (32.50%), Postives = 86/160 (53.75%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGL-GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVR 691
            ++++ L +  DL   E+    DY +  + +  L ++  + L+ K ET  EI     A++    +   + GD   IVGTGGDG NT+NIST A+I+AAA G KVAK             D+LE+ GV I+L P+  + C++   +GF+ +  Y    ++++
Sbjct:    6 DIVEKLFNSEDLNYKESYQLFDYFIKGQIELPLQTSILIALKLKQETSTEIAAAVEALLDNTKEFPKINGDLAGIVGTGGDGFNTINISTTAAIVAAAAGYKVAKHGGRSVSSKSGSFDLLESFGVNIELSPQQTKECLELYNLGFLFAPFYSEGFRYIK 165          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_PYRKO (Anthranilate phosphoribosyltransferase OS=Pyrococcus kodakaraensis GN=trpD PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.472e-18
Identity = 52/135 (38.52%), Postives = 77/135 (57.04%), Query Frame = 2
Query:  290 LNEADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            L  +D  LI A+   L+ KG T  E+ GLARAM   A K++ LG   D  GTGGDG++T+N+ST ++++ +A   +VAK             +VLEALG+ I + PE  R  V+     F+ +  YHPA++ + P
Sbjct:   25 LKGSDGVLIGAYLAALQTKGYTGEELAGLARAMRDSAVKLD-LGKVADTAGTGGDGSSTINVSTASALILSAF-TRVAKHGNVSITSKSGSANVLEALGLNIRVSPERAREMVESTNFTFIFAPAYHPALRPIMP 157          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_HALVO (Anthranilate phosphoribosyltransferase OS=Halobacterium volcanii GN=trpD PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.472e-18
Identity = 62/162 (38.27%), Postives = 82/162 (50.62%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFFVLLRAKGETFGEIVGLARAMIKYAT--KVEGLGDAVDIVGTGGDGANTVNI--STGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFV 688
            + I+ +    DLT  EA+       +E A EA I A    LRAKGET  EI G A+ M   A   +      + D  GTGGD  NT+N+   T  S  AA   A VAK             DVLE  GV ++ +PE V  C+++ G+GFM++  +HPAMK V
Sbjct:    3 DYIERVTGGADLTVEEARRPPRGRSSEDATEAQIGALLAALRAKGETEAEIAGFAQGMRDAALIHRARPAARSSDTAGTGGDDYNTINVLDPTTRSSAAAPGAAAVAKHGNYSVSSSSGSADVLEVAGVNVEAEPESVEACIEDNGVGFMLAPVFHPAMKAV 164          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_ERWT9 (Anthranilate phosphoribosyltransferase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=trpD PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.472e-18
Identity = 53/162 (32.72%), Postives = 85/162 (52.47%), Query Frame = 2
Query:  215 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            N +++ L     LT+ E+Q     ++  +     ++A  + ++ +GET  EI G A A++  A           DIVGTGGDG+N++NIST ++ +AAACG KVAK             D+L A G+ +DL  E  R+ +DE  + F+ + +YH   +   P
Sbjct:    2 NTILEKLYQSEVLTQVESQQLFTAIITGQLAPTQLAAALIAMKVRGETPQEIAGAATALLADAKPFPRPDYPFADIVGTGGDGSNSINISTSSAFVAAACGVKVAKHGNRSVSSQSGSSDLLAAFGISLDLPAEQARQALDELNVCFLFAPQYHSGFRHAMP 163          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_CHLTE (Anthranilate phosphoribosyltransferase OS=Chlorobium tepidum GN=trpD PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.472e-18
Identity = 54/158 (34.18%), Postives = 78/158 (49.37%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLL-NEADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFV 688
            E++  L+   DL+  E +  ++ ++ N   +A   A   LL+ KG T  E++G   +++  +T V     AVD  GTGGD   T NIST A+ +A   G  +AK             DVLEALG  +DL P        E G  F+ +  YHP+MK V
Sbjct:    5 EILQKLLEGHDLSRQEMETCMNSIMENRFTDAGTGAILALLQKKGATPAEVIGACASIVSKSTPVTLDQQAVDTCGTGGDHTGTFNISTAAAFIACGAGIPIAKHGNRSITSKCGSADVLEALGYQVDLPPCATEELFRETGFAFLFAPLYHPSMKAV 162          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_CHLP8 (Anthranilate phosphoribosyltransferase OS=Chlorobaculum parvum (strain NCIB 8327) GN=trpD PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.472e-18
Identity = 57/158 (36.08%), Postives = 77/158 (48.73%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLL-NEADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFV 688
            ELI  L++  DL+  E +A +D ++ N   +A   A   LL+ KG T  E +G    ++   T +     AVD  GTGGD   T NIST A+ +AA  G  +AK             DVLEALG  +DL          E G  F+ +  YHP+MK V
Sbjct:    5 ELIQKLLAGADLSAQEMEACIDSIMENRFTDAGTGAILALLQKKGVTPTEAIGAYENLMTRVTPITLPAHAVDTCGTGGDHRGTFNISTAAAFIAAGAGVPIAKHGNRSITSKCGSADVLEALGYRVDLPASATEEQFRETGFAFLFAPLYHPSMKAV 162          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_PETMO (Anthranilate phosphoribosyltransferase OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=trpD PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.229e-18
Identity = 54/159 (33.96%), Postives = 81/159 (50.94%), Query Frame = 2
Query:  212 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 682
            FN  +  ++   +L+  E + +++ ++  +   + +S F V L  KGET  EI   A+ M + AT +    G+ +D  GTGGD   T NIST  + + AA G  VAK             DVLE+LG+ I L P  V RC+ E  I F+ +  +H A K
Sbjct:    2 FNYYLQKVVKGENLSLDEMEQAMEMIMEGKVTHSQLSGFLVALHMKGETVEEITASAKVMKEKATPISIESGELMDTCGTGGDAKGTFNISTAVAFILAAAGVVVAKHGNRSVSSKSGSADVLESLGINISLPPSSVERCLKEINIAFLFAQDFHKATK 160          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_HELPS (Anthranilate phosphoribosyltransferase OS=Helicobacter pylori (strain Shi470) GN=trpD PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.229e-18
Identity = 53/161 (32.92%), Postives = 85/161 (52.80%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            E+++ L  + DL + E +     ++NE    A + A    L+ KGE+F EI   A  ++++A K    G D +D  GTGGDG  T+NIST A+++A++ G  +AK             D+LE LGV I+++P  +  C  +   GF+ +  YH + K   P
Sbjct:    3 EILNALYHQKDLNDGEVKKLFTLIINEKVSPAQLGAVLCALKIKGESFKEISVAATTLLEHAPKPFDSGLDLIDNCGTGGDGLKTINISTIAALIASSMGLSMAKHGSRSVSSHSGSADLLENLGVNIEMNPTQLENCFKQTHFGFLFAPLYHQSFKKSAP 163          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_CORDI (Anthranilate phosphoribosyltransferase OS=Corynebacterium diphtheriae GN=trpD PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.229e-18
Identity = 54/162 (33.33%), Postives = 85/162 (52.47%), Query Frame = 2
Query:  215 NELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFFVLLRAKGETFGEIVGLARAMIKYATK--VEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            N LI  L +     E   +      + + D+  I+A    +R +GET+ +I G A+A +       + G G  +D  GTGGDGANT+N++T AS++AAA G K+ K             DVLEAL + +DL+P+   R  + +   F+ +  Y+PA+  V+P
Sbjct:    8 NNLIAYLDNPHPTVEQAIEVFTPLTVGDYDDVHIAALLATIRTRGETYADIAGAAKAFLAAGRPFPITGAG-LMDSAGTGGDGANTINVTTAASLVAAAGGVKMVKCGNRSVSSKSGSADVLEALNIPLDLNPDRAVRQFNASNFTFLFAPAYNPAVAHVQP 168          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_SHEB9 (Anthranilate phosphoribosyltransferase OS=Shewanella baltica (strain OS195) GN=trpD PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.217e-18
Identity = 63/182 (34.62%), Postives = 87/182 (47.80%), Query Frame = 2
Query:  188 NTRPQTPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA---------VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPXEE 703
            +T P  P    L+D L     L+  +       L+  E  EA ++   V L+ +GET  EI G A AM + A K     +          VDIVGTGGDG NT+NIST A+ +AAA GAKVAK             D+L   G+ + + PE   RC+D   + F+ +  YH  +K   P  +
Sbjct:    2 STNPIQP----LLDVLYQGKSLSREQTAELFSALIRGEMSEAAMAGMLVALKMRGETIDEISGAADAM-RAAAKPFPCPERNNNPLHNGIVDIVGTGGDGFNTINISTTAAFVAAAAGAKVAKHGNRSVSSKSGSSDLLAQFGIDLTMSPETASRCLDALNLCFLFAPHYHGGVKHAVPVRQ 178          
The following BLAST results are available for this feature:
BLAST of FC931331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_FRAP21.893e-1832.50Anthranilate phosphoribosyltransferase OS=Francise... [more]
TRPD_PYRKO2.472e-1838.52Anthranilate phosphoribosyltransferase OS=Pyrococc... [more]
TRPD_HALVO2.472e-1838.27Anthranilate phosphoribosyltransferase OS=Halobact... [more]
TRPD_ERWT92.472e-1832.72Anthranilate phosphoribosyltransferase OS=Erwinia ... [more]
TRPD_CHLTE2.472e-1834.18Anthranilate phosphoribosyltransferase OS=Chlorobi... [more]
TRPD_CHLP82.472e-1836.08Anthranilate phosphoribosyltransferase OS=Chloroba... [more]
TRPD_PETMO3.229e-1833.96Anthranilate phosphoribosyltransferase OS=Petrotog... [more]
TRPD_HELPS3.229e-1832.92Anthranilate phosphoribosyltransferase OS=Helicoba... [more]
TRPD_CORDI3.229e-1833.33Anthranilate phosphoribosyltransferase OS=Coryneba... [more]
TRPD_SHEB94.217e-1834.62Anthranilate phosphoribosyltransferase OS=Shewanel... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34104A02EF PostHarvP1 Citrus clementina cDNA clone C34104A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931331 ID=FC931331; Name=FC931331; organism=Citrus clementina; type=EST; length=705bp
GAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCT
CTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTT
CGAAACTGTGGATTTACGACTGCGGGTAGTAATCCGAGATGCAGAGAATT
AACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGCCCTC
AAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGAT
TTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGC
TGATGAGGCCTTGATTAGTGCTTTTTTTGTTTTGCTCAGAGCCAAAGGAG
AAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCT
ACGAAGGTGGAAGGGCTGGGTGATGCAGTTGATATTGTGGGTACAGGAGG
TGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTG
CAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCT
GCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTT
GGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCA
TGATGTCGACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCANGTGAG
GAAAA
back to top