FC931331

Overview
NameFC931331
Unique NameFC931331
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_CLAM3 (Anthranilate phosphoribosyltransferase OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=trpD PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.193e-18
Identity = 60/164 (36.59%), Postives = 85/164 (51.83%), Query Frame = 2
Query:  197 PQTPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTV-NISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 682
            P  P +  LI  LI    L+ +E+  ++  ++  EA  A +    V LRA GET  EIVG   A+++ A  ++    A+DIVGTGGD    V NIS+ AS++AAA G  V K             DVL ALGV + + PE V   + E GI +  +  +HP  +
Sbjct:    2 PSAPTWPALITTLIEGRHLSVSESTWAMRQVMRGEATPAQLGGLLVALRASGETVDEIVGFRDAVLEEALPLDADPRALDIVGTGGDPYGAVLNISSVASVIAAAAGVPVIKHGNRGASSASGASDVLTALGVDLSITPERVAEVLRETGITYAHAALFHPGFR 165          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPG_THEMA (Anthranilate synthase component II OS=Thermotoga maritima GN=trpGD PE=3 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 9.395e-18
Identity = 57/156 (36.54%), Postives = 82/156 (52.56%), Query Frame = 2
Query:  233 LISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            L+   DLT  E++  ++++++  A +A I+ F V LR K ET  E+ G+A  M + +  ++      VD  GTGGDG  T NIST  + + AA G  VAK             DVLEA G  ++  PE + R + E G  F+ +   HPAMK V P
Sbjct:  257 LVEFEDLTFEESRQVMNFIMSGNATDAQIAGFLVALRMKEETGDELGGMASVMREKSIHIKAPSPRTVDTCGTGGDGFGTFNISTTTAFVVAAAGIPVAKHGNRSVSSKVGSADVLEAGGYKLEKTPEEMERELKETGFSFLFAPLLHPAMKHVMP 412          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_SHEON (Anthranilate phosphoribosyltransferase OS=Shewanella oneidensis GN=trpD PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.395e-18
Identity = 56/168 (33.33%), Postives = 82/168 (48.81%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAM------IKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPXEE 703
            L+D L     LT  +  +    L+  E +E +++   + L+ +GET  EI G A AM        Y       G  +DIVGTGGDG NT+NIST A+ +AAA GAKVAK             D+L   G+ + + PE    C++   + F+ +  YH  +K   P  +
Sbjct:    9 LLDILFQGKALTREQTASLFSVLIQGEMNETVMAGMLMALKIRGETIEEISGAADAMRAAAKPFPYPESSRSQG-VIDIVGTGGDGFNTINISTTAAFVAAAAGAKVAKHGNRSVSSKSGSSDLLAQFGIDLTMSPELASHCLEALNLCFLFAPHYHGGVKHAVPVRQ 175          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_FRATN (Anthranilate phosphoribosyltransferase OS=Francisella tularensis subsp. novicida (strain U112) GN=trpD PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.395e-18
Identity = 53/159 (33.33%), Postives = 85/159 (53.46%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGL-GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVR 691
            ++D L +  DL+  E+    DY +  + +  L ++    L+ K ET  EI     A++    +   + GD   IVGTGGDG NT+NIST A+I+AA  G KVAK             D+LE+ GV I+L P+  ++C++   +GF+ +  Y    +++R
Sbjct:    7 IVDKLYNLEDLSYQESYQLFDYFIKGQIELPLQTSILTALKLKKETSIEIASAVEALLDNTKEFPKIKGDLAGIVGTGGDGFNTINISTTAAIVAATAGYKVAKHGGRSVSSKSGSFDLLESFGVNIELAPDQTKQCLELYNLGFLFAPFYSEGFRYIR 165          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_UNCTG (Anthranilate phosphoribosyltransferase OS=Uncultured termite group 1 bacterium phylotype Rs-D17 GN=trpD PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.227e-17
Identity = 57/158 (36.08%), Postives = 86/158 (54.43%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFV 688
            E I  +++R +LT  + +  ++ +++  A +A I++F   LR KGET  EI   A  M +   K+    D +DIVGTGGD   T NIST +S + AA G  VAK             D+LE LGV I L P+     + + G+ F+M+  +H +MK+V
Sbjct:    4 EAIYEIVNRNNLTIDKTKEVMNRIMDGGATDAQIASFLTSLRLKGETIEEITACAMVMREKCQKLNPEFDVLDIVGTGGDELATFNISTISSFIIAAAGVPVAKHGNRSVSSKCGSADLLEVLGVNIMLTPQQCEAILKKVGMCFLMAQTFHSSMKYV 161          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_SULTO (Anthranilate phosphoribosyltransferase OS=Sulfolobus tokodaii GN=trpD PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.227e-17
Identity = 60/158 (37.97%), Postives = 85/158 (53.80%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFV 688
            EL+  +I R +LTE EA++  + ++  E  E + + F V L  KGE+  EI G A+AM   A  +     A+D  GTGGDG NT+N+ST  ++L +     VAK             DVLEALG  I + PE   + + E+   F+ +  YHPAMK V
Sbjct:    5 ELLRKIIRRENLTEDEARSIANSVMKAEVPEIVTAGFLVGLATKGESVEEITGFAKAMRDNALHIN-FPSALDTAGTGGDGLNTLNVSTAVALLISQV-YPVAKHGNRAVSGKSGSADVLEALGYNIIVKPELAEKLIKESKFVFLFAQLYHPAMKNV 160          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_BACHD (Anthranilate phosphoribosyltransferase OS=Bacillus halodurans GN=trpD PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.227e-17
Identity = 56/154 (36.36%), Postives = 81/154 (52.60%), Query Frame = 2
Query:  251 LTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKF-VRPXEE 703
            L E +A+  +D ++  EA  + I++   +LR +GET  E+ G ARAM +++ ++E      VD  GTGGD   T NIST  ++L +A G  VAK             DVLEAL + I   PE     + +  + FM +  YH AMK  V P +E
Sbjct:   15 LAERKAEQVMDAIMKGEATASQIASLLTVLRFRGETVAEMTGFARAMRRHSIQIEHSFSQVVDTCGTGGDDVGTFNISTATALLVSALGVPVAKHGNRAVSSKSGSADVLEALQIPIQSSPEEATASLQKHNMCFMFAPLYHVAMKHAVAPRKE 168          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_ACIF5 (Anthranilate phosphoribosyltransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=trpD PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.227e-17
Identity = 57/165 (34.55%), Postives = 92/165 (55.76%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLNEA-DEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKF-VRPXEE 703
            ++++ +++  DL+  E +     ++  A   A I A  + LR KG+   E+VG  +A+    T+VE   D  +D  GTGGD  +T NIST ++++AAA GA+VAK             DVLEA G+ +D+ P  V   ++  GIGF+ +  +H AM++ V P +E
Sbjct:    5 DILEQIVAGQDLSRKETETVFAAIMAGAWTPAQIGALLMGLRMKGQRVEELVGATQALRACMTRVEVSTDHLLDTCGTGGDALSTFNISTVSAVVAAAGGARVAKHGNRSMVSRSGSADVLEAAGLRMDMSPAEVADSIERIGIGFLFAPAHHGAMRYAVGPRKE 169          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_ACIF2 (Anthranilate phosphoribosyltransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=trpD PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.227e-17
Identity = 57/165 (34.55%), Postives = 92/165 (55.76%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLNEA-DEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKF-VRPXEE 703
            ++++ +++  DL+  E +     ++  A   A I A  + LR KG+   E+VG  +A+    T+VE   D  +D  GTGGD  +T NIST ++++AAA GA+VAK             DVLEA G+ +D+ P  V   ++  GIGF+ +  +H AM++ V P +E
Sbjct:    5 DILEQIVAGQDLSRKETETVFAAIMAGAWTPAQIGALLMGLRMKGQRVEELVGATQALRACMTRVEVSTDHLLDTCGTGGDALSTFNISTVSAVVAAAGGARVAKHGNRSMVSRSGSADVLEAAGLRMDMSPAEVADSIERIGIGFLFAPAHHGAMRYAVGPRKE 169          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPG_ECOLI (Anthranilate synthase component II OS=Escherichia coli (strain K12) GN=trpD PE=1 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 1.602e-17
Identity = 64/211 (30.33%), Postives = 100/211 (47.39%), Query Frame = 2
Query:  101 RNCGF--------TTAGSNPRCRELTAIQTPQPAVSDNTRPQTPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPXEE 703
            R CGF        TT G+  R  E T     Q     NT         +++ L     L++ E+      ++  E     ++A  V ++ +GE   EI G A A+++ A           DIVGTGGDG+N++NIST ++ +AAACG KVAK             D+L A G+ +D++ +  R+ +DE G+ F+ + KYH   +   P  +
Sbjct:  163 RVCGFQFHPESILTTQGA--RLLEQTLAWAQQKLEPANT------LQPILEKLYQAQTLSQQESHQLFSAVVRGELKPEQLAAALVSMKIRGEHPNEIAGAATALLENAAPFPRPDYLFADIVGTGGDGSNSINISTASAFVAAACGLKVAKHGNRSVSSKSGSSDLLAAFGINLDMNADKSRQALDELGVCFLFAPKYHTGFRHAMPVRQ 365          
The following BLAST results are available for this feature:
BLAST of FC931331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_CLAM37.193e-1836.59Anthranilate phosphoribosyltransferase OS=Clavibac... [more]
TRPG_THEMA9.395e-1836.54Anthranilate synthase component II OS=Thermotoga m... [more]
TRPD_SHEON9.395e-1833.33Anthranilate phosphoribosyltransferase OS=Shewanel... [more]
TRPD_FRATN9.395e-1833.33Anthranilate phosphoribosyltransferase OS=Francise... [more]
TRPD_UNCTG1.227e-1736.08Anthranilate phosphoribosyltransferase OS=Uncultur... [more]
TRPD_SULTO1.227e-1737.97Anthranilate phosphoribosyltransferase OS=Sulfolob... [more]
TRPD_BACHD1.227e-1736.36Anthranilate phosphoribosyltransferase OS=Bacillus... [more]
TRPD_ACIF51.227e-1734.55Anthranilate phosphoribosyltransferase OS=Acidithi... [more]
TRPD_ACIF21.227e-1734.55Anthranilate phosphoribosyltransferase OS=Acidithi... [more]
TRPG_ECOLI1.602e-1730.33Anthranilate synthase component II OS=Escherichia ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34104A02EF PostHarvP1 Citrus clementina cDNA clone C34104A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931331 ID=FC931331; Name=FC931331; organism=Citrus clementina; type=EST; length=705bp
GAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCT
CTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTT
CGAAACTGTGGATTTACGACTGCGGGTAGTAATCCGAGATGCAGAGAATT
AACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGCCCTC
AAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGAT
TTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGC
TGATGAGGCCTTGATTAGTGCTTTTTTTGTTTTGCTCAGAGCCAAAGGAG
AAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCT
ACGAAGGTGGAAGGGCTGGGTGATGCAGTTGATATTGTGGGTACAGGAGG
TGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTG
CAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCT
GCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTT
GGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCA
TGATGTCGACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCANGTGAG
GAAAA
back to top