FC931331

Overview
NameFC931331
Unique NameFC931331
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_LISMO (Anthranilate phosphoribosyltransferase OS=Listeria monocytogenes GN=trpD PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.662e-17
Identity = 55/161 (34.16%), Postives = 88/161 (54.66%), Query Frame = 2
Query:  224 IDCLISRVDLTEAEAQASLDYLLNEADEALIS-----AFFVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFV 688
            ++ L+ +V   E  ++  ++ +  E  E  +S     AF + L+ KGET  E+ G+A+AM + A +V    G A+D  GTGGD +N+ NIST ++ + AA G  VAK             DV + LG+ I+L PE +   +++ GI F+ +   HP MK+V
Sbjct:    1 MEILLQKVYDQENLSKEEMNIIATEIFEGRLSKTKMAAFLMALKVKGETAEEMAGIAQAMQQVAIQVAFPAGTAMDNCGTGGDKSNSFNISTTSAFVLAAAGIPVAKHGNRSISSRSGSADVCQELGIDINLRPEDMTYLLEKVGIAFLFAPHVHPNMKYV 161          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_LISMF (Anthranilate phosphoribosyltransferase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=trpD PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.662e-17
Identity = 49/126 (38.89%), Postives = 74/126 (58.73%), Query Frame = 2
Query:  314 ISAFFVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFV 688
            I+AF + L+ KGET  E+ G+A+AM + A +V    G A+D  GTGGD +N+ NIST ++ + AA G  VAK             DV + LG+ I++ PE +   +++ GI F+ +   HP MK+V
Sbjct:   36 IAAFLMALKVKGETAEEMAGIAQAMQRVAIQVAFPAGTAMDNCGTGGDKSNSFNISTTSAFVLAAAGIPVAKHGNRSISSRSGSADVCQELGIDINMRPEDMTYLLEKVGIAFLFAPHVHPNMKYV 161          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_LISMC (Anthranilate phosphoribosyltransferase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=trpD PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.662e-17
Identity = 49/126 (38.89%), Postives = 74/126 (58.73%), Query Frame = 2
Query:  314 ISAFFVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFV 688
            I+AF + L+ KGET  E+ G+A+AM + A +V    G A+D  GTGGD +N+ NIST ++ + AA G  VAK             DV + LG+ I++ PE +   +++ GI F+ +   HP MK+V
Sbjct:   36 IAAFLMALKVKGETAEEMAGIAQAMQRVAIQVAFPAGTAMDNCGTGGDKSNSFNISTTSAFVLAAAGIPVAKHGNRSISSRSGSADVCQELGIDINMRPEDMTYLLEKVGIAFLFAPHVHPNMKYV 161          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_HAES2 (Anthranilate phosphoribosyltransferase OS=Haemophilus somnus (strain 2336) GN=trpD PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.662e-17
Identity = 55/164 (33.54%), Postives = 81/164 (49.39%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPXEE 703
            +LI  L     L + + Q    Y++  +     ++   + L+ +GE   EI G  +A+I  A     +     DIVGTGGD ANT+NIST A+I+AA  G KV K             DVL ALG+ IDL  E  ++ +D   + F+ + +YH   K V P  +
Sbjct:    5 QLISQLFDGQHLNQEQIQQLFHYIIQGQLSNEQLAGVLIALKFRGEQTDEISGAVKAIIANAKPFPFIDYPFADIVGTGGDNANTINISTTAAIVAATLGYKVVKHGNRSVSSKSGASDVLNALGIKIDLSAEKSKQALDNLNLCFLWAQQYHLGFKHVAPVRQ 168          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_FRATO (Anthranilate phosphoribosyltransferase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=trpD PE=3 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 4.662e-17
Identity = 52/159 (32.70%), Postives = 84/159 (52.83%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGL-GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVR 691
            ++D L +  DL+  E+    DY +  + +  L ++  + L+ K ET  EI     A+     +   + GD   IVGTGGDG NT+NIST A+I+AA  G KVAK             D+LE+ GV I+L P+  ++C++   +GF+ +  Y    + ++
Sbjct:    7 IVDKLYNLEDLSYQESYQLFDYFIKGQIELPLQTSILIALKLKKETSIEIAAAVEALFDNTKEFPKIKGDLAGIVGTGGDGFNTINISTTAAIVAATAGYKVAKHGGRSVSSKSGSFDLLESFGVNIELAPDQTKQCLELYNLGFLFAPFYSDGFRHIK 165          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_AQUAE (Anthranilate phosphoribosyltransferase OS=Aquifex aeolicus GN=trpD PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.662e-17
Identity = 52/132 (39.39%), Postives = 71/132 (53.79%), Query Frame = 2
Query:  299 ADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKV--EGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFV 688
            A +A I A  +  + KGET  EI G  +   +   +V  +   + VD+VGTGGD ++T N+ST    + A  G KVAK             D LEALG  ++L PE V R ++E G GFM +  +HPAMK V
Sbjct:   34 ATDAQIGALVMGTKMKGETPEEIEGAVKLFREKVVRVPVKDPEELVDVVGTGGDKSSTFNVSTVTGFVLAGAGVKVAKHGNRSVSSKSGSADFLEALGAKVELLPEKVARLIEEVGFGFMFAPLFHPAMKRV 165          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_LISMH (Anthranilate phosphoribosyltransferase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=trpD PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.089e-17
Identity = 49/126 (38.89%), Postives = 74/126 (58.73%), Query Frame = 2
Query:  314 ISAFFVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFV 688
            I+AF + L+ KGET  E+ G+A+AM + A +V    G A+D  GTGGD +N+ NIST ++ + AA G  VAK             DV + LG+ I++ PE +   +++ GI F+ +   HP MK+V
Sbjct:   36 IAAFLMALKVKGETAEEMAGIAQAMQQVAIQVAFPAGTAMDNCGTGGDKSNSFNISTTSAFVLAAAGIPVAKHGNRSISSRSGSADVCQELGIDINMRPEDMTYLLEKVGIAFLFAPHVHPNMKYV 161          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_HELAH (Anthranilate phosphoribosyltransferase OS=Helicobacter acinonychis (strain Sheeba) GN=trpD PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.089e-17
Identity = 50/160 (31.25%), Postives = 84/160 (52.50%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            +++ L  + DL + E +    +++NE      + A    L+ KGE+  EI   A  ++++A K    G D +D  GTGGDG  T+NIST A+++A++ G  +AK             D+LE LGV I+++   +  C+ E+  GF+ +  YH + K   P
Sbjct:    4 ILNALYHQKDLNDEEVKRLFTFIINEEVSPTQLGAILCALKIKGESLSEISAAATTLLEHAPKPFKSGLDLIDNCGTGGDGLKTINISTIAALIASSMGLPMAKHGSRSVSSHSGSADLLENLGVNIEMNRAQLENCLKESHFGFLFAPLYHQSFKKSAP 163          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_FRATF (Anthranilate phosphoribosyltransferase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=trpD PE=3 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 6.089e-17
Identity = 52/159 (32.70%), Postives = 84/159 (52.83%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGL-GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVR 691
            ++D L +  DL+  E+    DY +  + +  L ++  + L+ K ET  EI     A+     +   + GD   IVGTGGDG NT+NIST A+I+AA  G KVAK             D+LE+ GV I+L P+  ++C++   +GF+ +  Y    + ++
Sbjct:    7 IVDKLYNLEDLSYQESYQLFDYFIKGQIELPLQTSILIALKLKKETSIEIAAAVEALFDNTKEFPKIKGDLAGIVGTGGDGFNTINISTTAAIVAATAGYKVAKHGGRSVSSKSGSFDLLESFGVNIELAPDQTKQCLELYNMGFLFAPFYSDGFRHIK 165          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_FLAPJ (Anthranilate phosphoribosyltransferase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=trpD PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.089e-17
Identity = 51/160 (31.87%), Postives = 87/160 (54.37%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLNEA-DEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            +++ LI+   L++ EA+  L  + N + + + I++F  +   +  T  E+ G   A+++    ++    + +D+ GTGGDG +T NIST AS + A  G KVAK             +V+E LG+    DP  + +C+D+AGI  + +  +HPAMK V P
Sbjct:    4 ILNRLINHETLSKQEAKNMLVNISNGSYNPSQIASFLTVYMMRNITINELAGFREALLELCIPIDLSAYNTIDLCGTGGDGKDTFNISTLASFVTAGAGIKVAKHGNYGVSSISGSSNVMENLGIKFSNDPIFLEKCIDQAGICVLHAPLFHPAMKNVAP 163          
The following BLAST results are available for this feature:
BLAST of FC931331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_LISMO4.662e-1734.16Anthranilate phosphoribosyltransferase OS=Listeria... [more]
TRPD_LISMF4.662e-1738.89Anthranilate phosphoribosyltransferase OS=Listeria... [more]
TRPD_LISMC4.662e-1738.89Anthranilate phosphoribosyltransferase OS=Listeria... [more]
TRPD_HAES24.662e-1733.54Anthranilate phosphoribosyltransferase OS=Haemophi... [more]
TRPD_FRATO4.662e-1732.70Anthranilate phosphoribosyltransferase OS=Francise... [more]
TRPD_AQUAE4.662e-1739.39Anthranilate phosphoribosyltransferase OS=Aquifex ... [more]
TRPD_LISMH6.089e-1738.89Anthranilate phosphoribosyltransferase OS=Listeria... [more]
TRPD_HELAH6.089e-1731.25Anthranilate phosphoribosyltransferase OS=Helicoba... [more]
TRPD_FRATF6.089e-1732.70Anthranilate phosphoribosyltransferase OS=Francise... [more]
TRPD_FLAPJ6.089e-1731.88Anthranilate phosphoribosyltransferase OS=Flavobac... [more]

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Properties
Property NameValue
Genbank descriptionC34104A02EF PostHarvP1 Citrus clementina cDNA clone C34104A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931331 ID=FC931331; Name=FC931331; organism=Citrus clementina; type=EST; length=705bp
GAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCT
CTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTT
CGAAACTGTGGATTTACGACTGCGGGTAGTAATCCGAGATGCAGAGAATT
AACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGCCCTC
AAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGAT
TTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGC
TGATGAGGCCTTGATTAGTGCTTTTTTTGTTTTGCTCAGAGCCAAAGGAG
AAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCT
ACGAAGGTGGAAGGGCTGGGTGATGCAGTTGATATTGTGGGTACAGGAGG
TGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTG
CAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCT
GCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTT
GGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCA
TGATGTCGACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCANGTGAG
GAAAA
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