FC931333
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL8_XENTR (60S ribosomal protein L8 OS=Xenopus tropicalis GN=rpl8 PE=2 SV=3) HSP 1 Score: 315.849 bits (808), Expect = 1.539e-85 Identity = 142/210 (67.62%), Postives = 177/210 (84.29%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MGRVIR QRKGAGSVFK+H HRKG A+ R++DF ER+GY+KG++ +IIHDPGRGAPLA+V FR P+R++ + ELFVAAEG++TGQFVYCG+KA L +GNVLP+ ++PEG +VC VE GDRG AR SG+YA VISHNP+ TR+KLPSG+KK++ S RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+VRGVAMNPVEHP Sbjct: 1 MGRVIRGQRKGAGSVFKAHVKHRKGAAKLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVAFRDPYRFKKRTELFVAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCVEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAIVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHP 210
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL8_RAT (60S ribosomal protein L8 OS=Rattus norvegicus GN=Rpl8 PE=2 SV=2) HSP 1 Score: 314.309 bits (804), Expect = 4.477e-85 Identity = 140/210 (66.67%), Postives = 177/210 (84.29%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MGRVIR QRKGAGSVF++H HRKG AR R++DF ER+GY+KG++ +IIHDPGRGAPLA+V FR P+R++ + ELF+AAEG++TGQFVYCG+KA L +GNVLP+ ++PEG +VC +E GDRG AR SG+YA VISHNP+ TR+KLPSG+KK++ S RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+VRGVAMNPVEHP Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHP 210
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL8_PONAB (60S ribosomal protein L8 OS=Pongo abelii GN=RPL8 PE=2 SV=3) HSP 1 Score: 314.309 bits (804), Expect = 4.477e-85 Identity = 140/210 (66.67%), Postives = 177/210 (84.29%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MGRVIR QRKGAGSVF++H HRKG AR R++DF ER+GY+KG++ +IIHDPGRGAPLA+V FR P+R++ + ELF+AAEG++TGQFVYCG+KA L +GNVLP+ ++PEG +VC +E GDRG AR SG+YA VISHNP+ TR+KLPSG+KK++ S RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+VRGVAMNPVEHP Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHP 210
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL8_MOUSE (60S ribosomal protein L8 OS=Mus musculus GN=Rpl8 PE=2 SV=2) HSP 1 Score: 314.309 bits (804), Expect = 4.477e-85 Identity = 140/210 (66.67%), Postives = 177/210 (84.29%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MGRVIR QRKGAGSVF++H HRKG AR R++DF ER+GY+KG++ +IIHDPGRGAPLA+V FR P+R++ + ELF+AAEG++TGQFVYCG+KA L +GNVLP+ ++PEG +VC +E GDRG AR SG+YA VISHNP+ TR+KLPSG+KK++ S RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+VRGVAMNPVEHP Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHP 210
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL8_HUMAN (60S ribosomal protein L8 OS=Homo sapiens GN=RPL8 PE=1 SV=2) HSP 1 Score: 314.309 bits (804), Expect = 4.477e-85 Identity = 140/210 (66.67%), Postives = 177/210 (84.29%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MGRVIR QRKGAGSVF++H HRKG AR R++DF ER+GY+KG++ +IIHDPGRGAPLA+V FR P+R++ + ELF+AAEG++TGQFVYCG+KA L +GNVLP+ ++PEG +VC +E GDRG AR SG+YA VISHNP+ TR+KLPSG+KK++ S RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+VRGVAMNPVEHP Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHP 210
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL8_BOVIN (60S ribosomal protein L8 OS=Bos taurus GN=RPL8 PE=2 SV=3) HSP 1 Score: 314.309 bits (804), Expect = 4.477e-85 Identity = 140/210 (66.67%), Postives = 177/210 (84.29%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MGRVIR QRKGAGSVF++H HRKG AR R++DF ER+GY+KG++ +IIHDPGRGAPLA+V FR P+R++ + ELF+AAEG++TGQFVYCG+KA L +GNVLP+ ++PEG +VC +E GDRG AR SG+YA VISHNP+ TR+KLPSG+KK++ S RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+VRGVAMNPVEHP Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHP 210
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL8_AEDAL (60S ribosomal protein L8 OS=Aedes albopictus GN=RpL8 PE=3 SV=1) HSP 1 Score: 313.538 bits (802), Expect = 7.637e-85 Identity = 144/210 (68.57%), Postives = 174/210 (82.86%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MGRVIRAQRKG GSVF +HT RKG + R+LD+ ER+GYLKG + +IIHDPGRGAPLA V FR P+++ +K+LF+AAEGMYTGQFVYCG++A L +GNVLP+ +PEG +VCN+E GDRG AR SG+YA VI+HNPD TR+KLPSGAKK++PS RAM+G VAGGGR +KP+LKAG AY K++VKRNCWPKVRGVAMNPVEHP Sbjct: 1 MGRVIRAQRKGEGSVFTAHTKKRKGEPKLRALDYAERHGYLKGTVKQIIHDPGRGAPLAVVHFRDPYKFNVRKQLFIAAEGMYTGQFVYCGKRAQLQIGNVLPIGLMPEGTIVCNLEEKTGDRGKLARTSGNYASVIAHNPDTKRTRVKLPSGAKKVLPSANRAMVGIVAGGGRIDKPILKAGRAYRKYKVKRNCWPKVRGVAMNPVEHP 210
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL8_DANRE (60S ribosomal protein L8 OS=Danio rerio GN=rpl8 PE=2 SV=3) HSP 1 Score: 311.612 bits (797), Expect = 2.902e-84 Identity = 138/210 (65.71%), Postives = 176/210 (83.81%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MGRVIR QRKGAGSVFK+H HRKG A+ R +DF ER+GY+KG++ +IIHDPGRGAPLA+V FR P+R++ + ELF+AAEG++TGQF+YCG+KA L +GNVLP+ ++PEG +VC +E GDRG AR SG+YA VISHNP+ +R+KLPSG+KK++ S RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+VRGVAMNPVEHP Sbjct: 1 MGRVIRGQRKGAGSVFKAHVKHRKGAAKLRHIDFAERHGYIKGIVKDIIHDPGRGAPLAKVMFRDPYRFKKRTELFIAAEGIHTGQFIYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKSRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHP 210
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL8_ICTPU (60S ribosomal protein L8 OS=Ictalurus punctatus GN=rpl8 PE=2 SV=3) HSP 1 Score: 311.227 bits (796), Expect = 3.790e-84 Identity = 139/210 (66.19%), Postives = 176/210 (83.81%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MGRVIRAQRKGAGSVFK+H HRKG A+ R +DF ER+GY+KG++ +IIHDPGRG PLA+V FR P+R++ + ELF+AAEG++TGQFV+CG+KA L +GNVLP+ +PEG ++C +E GDRG AR SG+YA VISHNP+ +R+KLPSGAKK++ S RA++G VAGGGR +KP+LKAG AYHK++VKRNCWP+VRGVAMNPVEHP Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKHRKGAAKLRHIDFAERHGYIKGIVKDIIHDPGRGTPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVFCGKKAQLNIGNVLPVGVMPEGTIICCLEEKPGDRGKLARASGNYATVISHNPETKKSRVKLPSGAKKVISSTNRAVVGVVAGGGRIDKPILKAGRAYHKYKVKRNCWPRVRGVAMNPVEHP 210
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL8_DICDI (60S ribosomal protein L8 OS=Dictyostelium discoideum GN=rpl8 PE=1 SV=2) HSP 1 Score: 309.686 bits (792), Expect = 1.009e-83 Identity = 144/211 (68.25%), Postives = 175/211 (82.94%), Query Frame = 1 Query: 67 MGRVIRAQRKG-AGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MGR+IRAQRKG AGSVF +HTHHRKG RFR+LD+ ER GY+KGV+ EIIHDPGRGAPLARV F+ +++ K+LF+A EGM+TGQFV+ G+KATL +GN+LP+ +PEG ++CNVE +GD G ARCSG+YA ++SHNPD TRIKLPSG+KK V S RAMIG VAGGGR +KP+LKAG A+HK+RVK+N WPKVRGVAMNPVEHP Sbjct: 1 MGRIIRAQRKGKAGSVFGAHTHHRKGTPRFRALDYAERQGYVKGVVKEIIHDPGRGAPLARVVFKGLTQFKLDKQLFIAPEGMHTGQFVFAGKKATLTIGNILPIGKLPEGTIICNVEEKLGDCGAVARCSGNYATIVSHNPDEGVTRIKLPSGSKKNVSSLARAMIGIVAGGGRIDKPMLKAGRAFHKYRVKKNNWPKVRGVAMNPVEHP 211 HSP 2 Score: 22.3274 bits (46), Expect = 1.009e-83 Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 3 Query: 696 HGGGNHSTLA-CSTVRRD 746 HGGGNH + +T +RD Sbjct: 212 HGGGNHQHVGHATTTKRD 229 The following BLAST results are available for this feature:
BLAST of FC931333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931333 ID=FC931333; Name=FC931333; organism=Citrus clementina; type=EST; length=751bpback to top |