FC931333
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL8_CAEEL (60S ribosomal protein L8 OS=Caenorhabditis elegans GN=rpl-8 PE=1 SV=1) HSP 1 Score: 302.368 bits (773), Expect = 1.761e-81 Identity = 137/210 (65.24%), Postives = 171/210 (81.43%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MGR IR QRKGAG +FKSH HRKG ++ R LD+ ER+GY+KG++ +IIHDPGRGAPLA + FR P++Y+ K VAAEGM+TGQF++CG KA + +GN++P+ ++PEG +CNVE+ GDRGV AR SG+YA VI+HNPD TRI+LPSGAKK+V S RAMIG VAGGGRT+KPLLKAG +YHK++ KRN WP+VRGVAMNPVEHP Sbjct: 1 MGRRIRIQRKGAGGIFKSHNKHRKGASKLRPLDYAERHGYIKGLVKDIIHDPGRGAPLAIIAFRDPYKYKTVKTTVVAAEGMHTGQFIHCGAKAQIQIGNIVPVGTLPEGTTICNVENKSGDRGVIARASGNYATVIAHNPDTKKTRIRLPSGAKKVVQSVNRAMIGLVAGGGRTDKPLLKAGRSYHKYKAKRNSWPRVRGVAMNPVEHP 210
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_CANGA (60S ribosomal protein L2 OS=Candida glabrata GN=RPL2 PE=4 SV=1) HSP 1 Score: 299.671 bits (766), Expect = 1.141e-80 Identity = 133/210 (63.33%), Postives = 174/210 (82.86%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MGRVIR QRKGAGS+F SHT R+G A+ R+LD+ ER+GY++GV+ +I+HD GRGAPLA+V FR P++Y+ ++E+F+A EG++TGQF+Y G+KA+L VGNVLPL S+PEG +V NVE GDRG AR SG+Y ++I HNPD + TR++LPSGAKKI+ S R +IG +AGGGRT+KPLLKAG A+HK+++KRN WPK RGVAMNPV+HP Sbjct: 1 MGRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYIRGVVKQIVHDAGRGAPLAKVVFRDPYKYKLREEIFIANEGVHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKPGDRGALARASGNYVIIIGHNPDENKTRVRLPSGAKKIISSDARGVIGVIAGGGRTDKPLLKAGRAFHKYKLKRNSWPKTRGVAMNPVDHP 210
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_YEAST (60S ribosomal protein L2 OS=Saccharomyces cerevisiae GN=RPL2A PE=1 SV=3) HSP 1 Score: 298.13 bits (762), Expect = 3.320e-80 Identity = 131/210 (62.38%), Postives = 173/210 (82.38%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MGRVIR QRKGAGS+F SHT R+G A+ R+LD+ ER+GY++G++ +I+HD GRGAPLA+V FR P++Y+ ++E+F+A EG++TGQF+Y G+KA+L VGNVLPL S+PEG +V NVE GDRG AR SG+Y ++I HNPD + TR++LPSGAKK++ S R +IG +AGGGR +KPLLKAG A+HK+R+KRN WPK RGVAMNPV+HP Sbjct: 1 MGRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYIRGIVKQIVHDSGRGAPLAKVVFRDPYKYRLREEIFIANEGVHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKPGDRGALARASGNYVIIIGHNPDENKTRVRLPSGAKKVISSDARGVIGVIAGGGRVDKPLLKAGRAFHKYRLKRNSWPKTRGVAMNPVDHP 210
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_SCHPO (60S ribosomal protein L2 OS=Schizosaccharomyces pombe GN=rpl2a PE=2 SV=2) HSP 1 Score: 297.745 bits (761), Expect = 4.337e-80 Identity = 134/210 (63.81%), Postives = 168/210 (80.00%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MGRVIRAQRK +G +F++HT RKG A+ R+LDF ER+GY++GV+ +IIHDPGRGAPLA+V FR+P+ Y+ E FVA EGMYTGQFVYCG+ A L VGNVLP+ +PEG ++ NVE GDRG R SG+Y +++ H+ D TR+KLPSGAKK+VPS R ++G VAGGGR +KPLLKAG A+HK+RVKRNCWP+ RGVAMNPV+HP Sbjct: 1 MGRVIRAQRK-SGGIFQAHTRLRKGAAQLRTLDFAERHGYIRGVVQKIIHDPGRGAPLAKVAFRNPYHYRTDVETFVATEGMYTGQFVYCGKNAALTVGNVLPVGEMPEGTIISNVEEKAGDRGALGRSSGNYVIIVGHDVDTGKTRVKLPSGAKKVVPSSARGVVGIVAGGGRIDKPLLKAGRAFHKYRVKRNCWPRTRGVAMNPVDHP 209
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_ASHGO (60S ribosomal protein L2 OS=Ashbya gossypii GN=RPL2 PE=4 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 9.661e-80 Identity = 134/210 (63.81%), Postives = 171/210 (81.43%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MGRVIR QRKGAGS+F SHT R+G A+ R+LD+ ER+GY++GV+ +I+HD GRGAPLA+V FR P++Y+ ++E F+A EG++TGQF+Y G+ A+L VGN+LPL S+PEG +V NVE GDRG AR SG+Y +VI HNPD + TRI+LPSGAKKIV S R +IG +AGGGR +KPLLKAG A+HK++VKRN WPK RGVAMNPV+HP Sbjct: 1 MGRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYIRGVVKQIVHDAGRGAPLAKVVFRDPYKYKLREETFIANEGVHTGQFIYAGKNASLNVGNILPLGSVPEGTIVSNVEERPGDRGALARTSGNYVIVIGHNPDENKTRIRLPSGAKKIVSSDARGVIGVIAGGGRVDKPLLKAGRAFHKYKVKRNSWPKTRGVAMNPVDHP 210
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_METM5 (50S ribosomal protein L2P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl2p PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 6.320e-47 Identity = 99/211 (46.92%), Postives = 131/211 (62.09%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGSV-FKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MG+ + +Q +G G+ ++S TH RKG ++RS D E++G + G + +I+HDPGR AP+A+V F + ++ L + EG+ G+ + CG A + GNVLPL IPEG V N+E GD G R G YA VISH D T +KLPSG K++ CRA +G VAGGGR EKP +KAG YH K WPKVRGVAMN V+HP Sbjct: 1 MGKRLISQNRGRGTPKYRSPTHKRKGAVKYRSYDEMEKDGKILGTVVDILHDPGRSAPVAKVRFAND-----EERLVLIPEGIQVGEEIECGISAEIKPGNVLPLGEIPEGIPVYNIETIPGDGGKLVRSGGCYAHVISH--DVGKTIVKLPSGFSKVLNPACRATVGVVAGGGRKEKPFVKAGKKYHSLSAKAVAWPKVRGVAMNAVDHP 204
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_METMP (50S ribosomal protein L2P OS=Methanococcus maripaludis GN=rpl2p PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.839e-46 Identity = 98/211 (46.45%), Postives = 131/211 (62.09%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGSV-FKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MG+ + +Q +G G+ ++S TH RKG ++RS D E++G + G + +I+HDPGR AP+A+V F + ++ L + EG+ G+ + CG A + GNVLPL IPEG V N+E GD G R G YA VISH D T ++LPSG K++ CRA +G VAGGGR EKP +KAG YH K WPKVRGVAMN V+HP Sbjct: 1 MGKRLISQNRGRGTPKYRSPTHKRKGAVKYRSYDEMEKDGKILGTVIDILHDPGRSAPVAKVKFAND-----EERLVLIPEGIQVGEEIECGISAEIKPGNVLPLGEIPEGIPVYNIETIPGDGGKLVRSGGCYAHVISH--DVGKTIVRLPSGFSKVLNPACRATVGVVAGGGRKEKPFVKAGKKYHSLSAKAVAWPKVRGVAMNAVDHP 204
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_METM7 (50S ribosomal protein L2P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl2p PE=3 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 3.137e-46 Identity = 97/211 (45.97%), Postives = 131/211 (62.09%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGSV-FKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MG+ + +Q +G G+ ++S TH RKG ++RS D E++G + G + +I+HDPGR AP+A+V F + ++ L + EG+ G+ + CG A + GNVLPL IPEG V N+E GD G R G YA V+SH D T +KLPSG K++ CRA +G VAGGGR EKP +KAG +H K WPKVRGVAMN V+HP Sbjct: 1 MGKRLISQNRGRGTPKYRSPTHKRKGAVKYRSYDEMEKDGKILGTVVDILHDPGRSAPVAKVRFAND-----EERLVLIPEGIQVGEEIECGISAEIKPGNVLPLGEIPEGIPVYNIETIPGDGGKLVRSGGCYAHVVSH--DVGKTIVKLPSGFSKVLNPACRATVGVVAGGGRKEKPFVKAGKKHHSLSAKAIAWPKVRGVAMNAVDHP 204
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_METM6 (50S ribosomal protein L2P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl2p PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 9.127e-46 Identity = 96/211 (45.50%), Postives = 131/211 (62.09%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGSV-FKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MG+ + +Q +G G+ ++S +H RKG ++RS D E++G + G + +I+HDPGR AP+A+V F + ++ L + EG+ G+ + CG A + GNVLPL IPEG V N+E GD G R G YA V+SH D T +KLPSG K++ CRA +G VAGGGR EKP +KAG +H K WPKVRGVAMN V+HP Sbjct: 1 MGKRLISQNRGRGTPKYRSPSHKRKGAVKYRSYDEMEKDGKILGTVVDILHDPGRSAPVAKVRFAND-----EERLVLIPEGIQVGEEIECGISAEIKPGNVLPLGEIPEGIPVYNIETIPGDGGKLVRSGGCYAHVVSH--DVGKTIVKLPSGFSKVLNPACRATVGVVAGGGRKEKPFVKAGKKHHSLSAKAIAWPKVRGVAMNAVDHP 204
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_STAMF (50S ribosomal protein L2P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.192e-45 Identity = 99/211 (46.92%), Postives = 128/211 (60.66%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MG+ I QR G G+ F+S +H R GPA++ L +KG I +++HDPGR PLA++ + L A EGMY GQ + G A + GN+LP+ IPEG + N+E GD G F R SG YA+++ T+++LPSG VP+ RA IG +AGGGR EKPLLKAGNAYHK++VK WPKVRGVAMN V HP Sbjct: 1 MGKRILPQRMGRGTPTFRSPSHRRVGPAKYPPLKLDRT---IKGKIIDLLHDPGRWVPLAKIVLEDGTTF-----LTPAVEGMYVGQIIEIGPDAHISNGNILPIGKIPEGTQIANIEKRPGDGGKFVRSSGTYALIVGRA--GTKTQVQLPSGKIIEVPNNARATIGVIAGGGRDEKPLLKAGNAYHKWKVKAKKWPKVRGVAMNAVSHP 201 The following BLAST results are available for this feature:
BLAST of FC931333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931333 ID=FC931333; Name=FC931333; organism=Citrus clementina; type=EST; length=751bpback to top |