FC931333
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_PORG3 (50S ribosomal protein L2 OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=rplB PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.373e-17 Identity = 59/184 (32.07%), Postives = 90/184 (48.91%), Query Frame = 1 Query: 148 RFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPM 699 ++R +DF + + I +DP R + +A + + K +A +G+ G V G +A VGN LPL +IP G ++ N+E G R +G +A + S + IK+PSG + + S C+A IG V G ++ L K+G A + R P RGV MNPV+HPM Sbjct: 61 KYRFIDFKRTKDGIPATVKTIEYDPNRSSRIALLYYA-----DGAKAYIIAPDGLEVGHTVMSGSEAAPEVGNALPLANIPVGTIIHNIELRPGQGAKMVRSAGSFAQLTSR--EGTYVVIKMPSGEVRRILSTCKATIGSV---GNSDHALEKSGKAGRSRWLGRR--PHNRGVVMNPVDHPM 232
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_PARDP (50S ribosomal protein L2 OS=Paracoccus denitrificans (strain Pd 1222) GN=rplB PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.373e-17 Identity = 62/195 (31.79%), Postives = 92/195 (47.18%), Query Frame = 1 Query: 124 THHRKGPAR---FRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAA-EGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 T RKG +R +DF + + I +DP R A +A + +Y+ ++ ++ A + + G V G K + GN +P +P G +V NVE G G AR +G YA + D +I+L SG ++V C A IG V+ + + KAG HK P VRGVAMNP++HP Sbjct: 50 TMRRKGGGAKRLYRIVDFKRTKFDVSATVERIEYDPNRTAFIALI------KYEDGEQAYILAPQRLAVGDKVIAGAKVDVKPGNAMPFSGMPIGTIVHNVELKPGKGGQIARSAGTYAQFVGR--DGGYAQIRLSSGELRLVRQECMATIGAVSNSDHSNQNFGKAGRNRHK-----GIRPSVRGVAMNPIDHP 231
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_PARD8 (50S ribosomal protein L2 OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=rplB PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.373e-17 Identity = 58/184 (31.52%), Postives = 90/184 (48.91%), Query Frame = 1 Query: 148 RFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPM 699 ++R +DF + + I +DP R + +A + + K +A G+ GQ V G A VGN LP+ +IP G ++ N+E G R +G +A + S + IK+PSG + + + C+A IG V G ++ L K+G A + R P+ RGV MNPV+HPM Sbjct: 61 KYRIIDFKRNKDGIPATVKSIEYDPNRSSRIALLYYA-----DGAKSYIIAPNGLEVGQTVVSGSDAAPEVGNTLPMANIPVGTIIHNIELRPGQGAKMVRSAGAFAQLTS--KEGAYAIIKMPSGETRKILAACKATIGAV---GNSDHALEKSGKAGRSRWLGRR--PRNRGVVMNPVDHPM 232
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_OCHA4 (50S ribosomal protein L2 OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=rplB PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.373e-17 Identity = 62/183 (33.88%), Postives = 93/183 (50.82%), Query Frame = 1 Query: 151 FRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAA-EGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 +R +DF R + G + + +DP R A +A + RY+ + ++ A + + G V G + GN +PL S+P G +V NVE G G AR +G YA ++ D ++L SG +++VP C A +G V+ KAG + +R KR P VRGVAMNPV+HP Sbjct: 62 YRFIDFKRRKLDVVGTVERLEYDPNRTAFIALI------RYEDGELAYILAPQRLAVGDKVVAGNSVDVKPGNAMPLASMPVGTIVHNVELKPGKGGQIARSAGTYAQLVGR--DQGMAILRLNSGEQRLVPGACFASVGAVSNPDHGNINDGKAGRSV--WRGKR---PHVRGVAMNPVDHP 231
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_NOSP7 (50S ribosomal protein L2 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=rplB PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.373e-17 Identity = 66/198 (33.33%), Postives = 92/198 (46.46%), Query Frame = 1 Query: 124 THHRKGPAR---FRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHP 696 T R+G +R +DF + + I +DP R A +A + ++ +K + G+ G + G ++ GN LPL IP G V NVE G G R +G A V++ + D +KLPSG +++ C A IGQV G T+ L AG A RN W PKVRG MNPV+HP Sbjct: 50 TSRRRGGGHKQLYRIIDFKRDKHNIPAKVAAIEYDPNRNARIALLYYQ-----DGEKRYILHPNGLKVGTIIISGPESPFEDGNALPLSRIPLGTSVHNVEMTPGKGGQIVRAAGASAQVVA--KEGDYVTLKLPSGEVRLIRRDCYATIGQV---GNTDARNLSAGKA------GRNRWKGRRPKVRGSVMNPVDHP 231
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_NITHX (50S ribosomal protein L2 OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=rplB PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.373e-17 Identity = 56/183 (30.60%), Postives = 92/183 (50.27%), Query Frame = 1 Query: 151 FRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAA-EGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 +R++DF + ++ + +DP R A +A + +YQ ++ ++ A + + G V G + GNV+PL ++P G +V NVE +G G AR +G YA ++ D+D ++L SG +++V CR IG V+ + KAG R N RGV MNP++HP Sbjct: 62 YRNVDFKRGKEDVPAIVERLEYDPNRTAFIALI------KYQDGEQAYILAPQRLAVGDTVVAGNYVDVKPGNVMPLGNMPVGTIVHNVEMKIGKGGQLARSAGTYAQIVGR--DHDYVILRLNSGEQRLVHGRCRGAIGAVSNPDHMNTSIGKAGRTRWMGRRPHN-----RGVVMNPIDHP 231
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_MARMS (50S ribosomal protein L2 OS=Marinomonas sp. (strain MWYL1) GN=rplB PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.373e-17 Identity = 58/182 (31.87%), Postives = 91/182 (50.00%), Query Frame = 1 Query: 151 FRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 +R +DF + V+ + +DP R A +A + + ++ +A++GM G V+ G A + GN LPL++IP G+ V VE G AR +G A +++ T R++ SG + V + CRA +G+V+ + + L KAG R P VRG AMNPV+HP Sbjct: 62 YRMVDFRRNKDGISAVVERLEYDPNRSANIALIRYA-----DGERRYIIASKGMVAGNIVFSGADAPIKAGNTLPLQNIPVGSTVHCVELKPGKGAQVARSAGASAQLVAREGRYVTLRLR--SGEMRKVLTECRATLGEVSNSEHSLRVLGKAGATRW-----RGVRPTVRGAAMNPVDHP 231
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_LEPIN (50S ribosomal protein L2 OS=Leptospira interrogans GN=rplB PE=3 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.373e-17 Identity = 60/204 (29.41%), Postives = 96/204 (47.06%), Query Frame = 1 Query: 91 RKGAGSVFKSHTHHRKGPAR--FRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 + G G K H+ G + +R +DF R + V+ + +DP R A ++ + ++ + +A +G+ G V G + + +GN +P+ IP G V NVE +G G AR +G + + D + +KLPS + V C A IG + + KAG + ++ KR P VRGV MNPV+HP Sbjct: 40 KAGRGDGGKIAVRHKGGRVKRKYRIIDFKRRKANIPAVVKSLEYDPNRSAFISLICYK-----DGEYSYILAPDGIKVGDTVQSGAGSEIKIGNAMPIGKIPPGTNVHNVELQIGKGGQIARTAGSFGTIAGR--DGEYILLKLPSSEVRKVHENCYATIGICSNKDHNLVSIGKAGRS--RWLGKR---PSVRGVVMNPVDHP 231
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_LEPIC (50S ribosomal protein L2 OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=rplB PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.373e-17 Identity = 60/204 (29.41%), Postives = 96/204 (47.06%), Query Frame = 1 Query: 91 RKGAGSVFKSHTHHRKGPAR--FRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 + G G K H+ G + +R +DF R + V+ + +DP R A ++ + ++ + +A +G+ G V G + + +GN +P+ IP G V NVE +G G AR +G + + D + +KLPS + V C A IG + + KAG + ++ KR P VRGV MNPV+HP Sbjct: 40 KAGRGDGGKIAVRHKGGRVKRKYRIIDFKRRKANIPAVVKSLEYDPNRSAFISLICYK-----DGEYSYILAPDGIKVGDTVQSGAGSEIKIGNAMPIGKIPPGTNVHNVELQIGKGGQIARTAGSFGTIAGR--DGEYILLKLPSSEVRKVHENCYATIGICSNKDHNLVSIGKAGRS--RWLGKR---PSVRGVVMNPVDHP 231
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_CYAP4 (50S ribosomal protein L2 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=rplB PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.373e-17 Identity = 66/211 (31.28%), Postives = 95/211 (45.02%), Query Frame = 1 Query: 76 VIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHP 696 VI ++R+G G H++ +R +DF + G + + +DP R A ++ V + +K + + G + G A + VGN LPL IP G V NVE G G R +G A V++ + D +KLPSG ++ C A IGQ+ + KAG RN W PKVRG MNPV+HP Sbjct: 48 VITSRRRGGG--------HKR---LYREIDFRRNKLSVPGTVLTVEYDPNRNARISLVQYE-----DGEKRYILHPRNLAVGAVIAAGPDAAIEVGNALPLSKIPLGTGVHNVEITPGRGGQMVRAAGAMAQVVA--KEGDMVTLKLPSGEVRLFRKECYATIGQIGNVDVNNISIGKAG---------RNRWKGRRPKVRGSVMNPVDHP 231 The following BLAST results are available for this feature:
BLAST of FC931333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931333 ID=FC931333; Name=FC931333; organism=Citrus clementina; type=EST; length=751bpback to top |