FC931333
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_HYPBU (50S ribosomal protein L2P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl2p PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 5.730e-40 Identity = 95/212 (44.81%), Postives = 126/212 (59.43%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFV-AAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MG+ + QR+G GS +++S PAR+ L L+G + E++HDPGR PLA + ++ E ++ AAEGMY GQ + G A V GN+LP+ IPEG V N+E GD G R G YA+++ + + T I+LPSG K VP+ RA IG VAG GR EKPLLKAG AY+K+ K + WP+VRGVAMN V HP Sbjct: 1 MGKRLIVQRRGKGSPLYRSRPWLHPAPARYPPLT----PVTLRGRVVELVHDPGRWVPLAHIVL------ENGDEFYIPAAEGMYVGQIIEIGPDARPVNGNILPVGKIPEGTQVYNIEIRPGDGGKLVRAYGTYAIILGRS--GNKTIIQLPSGKVKEVPNDARATIGIVAGAGRLEKPLLKAGAAYYKWSAKPHVWPRVRGVAMNAVNHP 200
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_THEON (50S ribosomal protein L2P OS=Thermococcus onnurineus (strain NA1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.844e-39 Identity = 89/211 (42.18%), Postives = 126/211 (59.72%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGSV-FKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MG+ + QR+G G+ F++ +H +G R+ L+ + L G + EI+HDPGR AP+ARV F + ++L +A EG+ G+ + G A + +GN LPL IPEG+ V ++E GD G + R G YA+V+S + D ++LPSG K CRA IG VAGGGR EKP++KAG AY+ + + WPK RGV MN V HP Sbjct: 1 MGKSLIQQRRGKGTTTFRAPSHRYRGAVRYVPLNLTKEKT-LVGKVVEILHDPGRTAPVARVKFENGM-----EKLIIAPEGILVGEEIAIGPNAPIKIGNTLPLAMIPEGSYVYDIEGTPGDGGKYVRAGGVYALVVSR--EKDKVIVQLPSGELKQFNPMCRATIGVVAGGGRLEKPIVKAGKAYYIAKARNRFWPKPRGVKMNAVNHP 203
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_THEPD (50S ribosomal protein L2P OS=Thermofilum pendens (strain Hrk 5) GN=rpl2p PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.714e-39 Identity = 94/212 (44.34%), Postives = 128/212 (60.38%), Query Frame = 1 Query: 67 MGRVIRAQRKG-AGSVFKSHTHHRKGPARFRSLDFGE-RNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MG+ + QR+G GSVF++ R GPAR+ + E +N L GV+ +++H+PGRGAPLA V F K + EG+ GQ +Y G KA V+G+++ + ++PEG +V N+E GD G AR SG YA+V++H+ N T I+LPS K V S RA IG VA GGR EKP+LKAG +H R K +P VRG AM+ HP Sbjct: 1 MGKRLLVQRRGRGGSVFRNPGWKRLGPARYPPYNPEEFKNKVLVGVVKDLLHEPGRGAPLALVEFE-----DGTKMYMIPPEGLAVGQKIYYGAKAPAVLGSIVEIGNVPEGTIVSNIEIRPGDGGKLARSSGAYALVLAHS--NGKTLIQLPSKKVKEVSSEARATIGMVAAGGRIEKPMLKAGKMWHWSRAKSFKYPTVRGKAMSAYAHP 205
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_THENV (50S ribosomal protein L2P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rpl2p PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.843e-38 Identity = 91/211 (43.13%), Postives = 122/211 (57.82%), Query Frame = 1 Query: 67 MGRVIRAQRKG-AGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MG+ I QR+G GS F+S + R+GP R+ L R G + +IIH PG AP+A++ + + L AAEG+Y GQ + G A+ GNV+ L PEG +V NVE GD G FAR G YAVV+ P+ + T ++LPSG V + RA +G VAGGGR EKP++KAG Y++ R K +P VRG AM+P HP Sbjct: 1 MGKRILVQRRGRGGSQFRSPSWRREGPVRYPPLGTAGR-----GYVVDIIHVPGLNAPVAKIRLENGLEF-----LNYAAEGLYVGQEIEIGEAASPKTGNVVVLGKAPEGTMVFNVEKRPGDGGKFARSGGTYAVVVGQKPEENKTIVRLPSGRTMEVDARGRATVGLVAGGGRIEKPMVKAGKKYYRARAKAWKYPLVRGKAMSPYAHP 201
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_METMA (50S ribosomal protein L2P OS=Methanosarcina mazei GN=rpl2p PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.407e-38 Identity = 84/212 (39.62%), Postives = 128/212 (60.38%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFV-AAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MG+ + +Q +G G+ +++ +H K R +D N L+G + +I HDP R AP+A+V F ++ +ELF+ A+EG+ G + CG A + GN++P+ ++PEG +CN+E D G F R SG YA V++H P T + +PSG K + CRA++G VAGGGR ++P LKAG YHK + + +P+V VAMNP +HP Sbjct: 1 MGKRLISQNRGRGTPTYRAPSHKYKADLRHPRVD---ENTSLQGEVIDIEHDPARSAPIAKVAF------ENGEELFLLASEGVAVGNIIECGDDAEVKPGNIVPIGNVPEGFFICNIESKPNDGGKFVRSSGVYATVVTHEPTR--TAVSMPSGNIKWLNPKCRAVVGIVAGGGRVDRPWLKAGKKYHKMKTRAAKYPRVSAVAMNPRDHP 201
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_METBF (50S ribosomal protein L2P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl2p PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.407e-38 Identity = 82/211 (38.86%), Postives = 127/211 (60.19%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MG+ I +Q +G G+ +++ +H K R +D N ++G + + HDP R AP+A+V F ++ L +A+EG+ G + CG A + GN++P+ +PEG +CN+E D G F R SG YA V++H +++ T + +PSG K + CRA++G VAGGGR ++P LKAG YHK + + +P+V GVAMNPV+HP Sbjct: 1 MGKRIISQNRGRGTPTYRAPSHKYKAELRHPRVD---ENTSIQGKVINLEHDPARSAPIAKVVFE-----TGEERLLLASEGIAVGSTIECGDDADVRPGNIVPIGKVPEGFFICNIESKPNDGGRFVRSSGVYATVVTH--ESNRTAVAMPSGNIKWLNPKCRAVVGIVAGGGRVDRPWLKAGKKYHKMKTRAAKYPRVSGVAMNPVDHP 201
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_CALMQ (50S ribosomal protein L2P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl2p PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.407e-38 Identity = 91/212 (42.92%), Postives = 124/212 (58.49%), Query Frame = 1 Query: 67 MGRVIRAQRKG-AGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFV-AAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MG+ I QR G GS F+S + R P R+ + ++G+I E++H G AP V ++ +E+++ A EG+Y G+ + G A + GNV+P+ IPEG +VCN+E VGD G +AR SG Y VV+ H + TT ++LPSG V S RA IG VAGGGR EKP +KAGN YH+ R K +PKVRG AM+ HP Sbjct: 1 MGKKILVQRAGRGGSQFRSPSWRRIAPLRYVQFSEEQLKTTIRGIIKELVHVTGLNAPAMHVVL------ENGEEMYLPAVEGVYVGKIIEFGPDAKVEPGNVMPIGKIPEGTMVCNIEKRVGDGGKYARSSGTYGVVMIHR--DSTTLVQLPSGRMIEVDSRARATIGIVAGGGRIEKPFVKAGNKYHRARTKAWKYPKVRGKAMSAYAHP 204
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_METAC (50S ribosomal protein L2P OS=Methanosarcina acetivorans GN=rpl2p PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 7.744e-37 Identity = 83/212 (39.15%), Postives = 125/212 (58.96%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFV-AAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MG+ + +Q +G G+ +++ +H K R +D N L+G + I HDP R AP+A+V F ++ +ELF+ A+EG+ G + CG A + GN++P+ ++PEG +CNVE D G F R SG YA V++H T + +PSG K + CRA++G VAG GR ++P LKAG YHK + + +P+V VAMNP +HP Sbjct: 1 MGKRLISQNRGRGTPTYRAPSHKYKADLRHPRVD---ENSSLRGEVVGIEHDPARSAPIAKVAF------ENGEELFLLASEGIAVGNIIECGDDAEVKPGNIVPIGNVPEGFFICNVESKPNDGGKFVRSSGVYATVVTHEATR--TAVSMPSGNIKWLNPKCRAVVGIVAGSGRVDRPWLKAGKKYHKMKTRAAKYPRVSAVAMNPRDHP 201
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_SULIY (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.725e-36 Identity = 88/211 (41.71%), Postives = 124/211 (58.77%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MG+ + QR G GS F+S + R G R+ ++ G+L G + +I+H+PG AP+A + + ++ Q A +G+ Q + G+ + + GNV+ + PEG +VCNVE + GD G +AR +G YAVV+ + D IKLPS K V + RA +G VAGGG EKPLLKAG Y K++VK WP VRGVAMN V+HP Sbjct: 1 MGKNLLQQRAGKGSPTFRSPSWLRIGKVRYPNIF-----GHLVGKVIDIVHNPGMNAPVAIIKLENGTKFLTQ-----AIQGLVINQKIEFGKGSPIANGNVIEIGDAPEGTIVCNVEENFGDGGKYARSAGSYAVVVGKS--GDKVLIKLPSDKIKAVSNKARATVGVVAGGGVVEKPLLKAGANYWKYKVKAKKWPIVRGVAMNVVDHP 199
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL2_SULIM (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.725e-36 Identity = 88/211 (41.71%), Postives = 124/211 (58.77%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MG+ + QR G GS F+S + R G R+ ++ G+L G + +I+H+PG AP+A + + ++ Q A +G+ Q + G+ + + GNV+ + PEG +VCNVE + GD G +AR +G YAVV+ + D IKLPS K V + RA +G VAGGG EKPLLKAG Y K++VK WP VRGVAMN V+HP Sbjct: 1 MGKNLLQQRAGKGSPTFRSPSWLRIGKVRYPNIF-----GHLVGKVIDIVHNPGMNAPVAIIKLENGTKFLTQ-----AIQGLVINQKIEFGKGSPIANGNVIEIGDAPEGTIVCNVEENFGDGGKYARSAGSYAVVVGKS--GDKVLIKLPSDKIKAVSNKARATVGVVAGGGVVEKPLLKAGANYWKYKVKAKKWPIVRGVAMNVVDHP 199 The following BLAST results are available for this feature:
BLAST of FC931333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931333 ID=FC931333; Name=FC931333; organism=Citrus clementina; type=EST; length=751bpback to top |